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authorJustin Lecher <jlec@gentoo.org>2017-11-18 20:39:44 +0000
committerJustin Lecher <jlec@gentoo.org>2017-11-18 20:39:44 +0000
commitbce61aa3e4fe85fe411df858eb30ebe72a3a8f88 (patch)
treeb1c9615114a61663dd20c38cda7bb4b0a04ec6cd
parentsci-biology/bismark: Fix repoman warnings (diff)
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-rw-r--r--sci-mathematics/gappa/metadata.xml10
-rw-r--r--sci-mathematics/gappalib-coq/metadata.xml10
-rw-r--r--sci-mathematics/giac/metadata.xml10
-rw-r--r--sci-mathematics/kash-bin/metadata.xml16
-rw-r--r--sci-mathematics/kayali/metadata.xml18
-rw-r--r--sci-mathematics/lattE-macchiato/metadata.xml18
-rw-r--r--sci-mathematics/libsfmt/metadata.xml8
-rw-r--r--sci-mathematics/ltl2ba/metadata.xml8
-rw-r--r--sci-mathematics/mathics/metadata.xml2
-rw-r--r--sci-mathematics/mdp/metadata.xml26
-rw-r--r--sci-mathematics/netgen/metadata.xml22
-rw-r--r--sci-mathematics/open-axiom/metadata.xml18
-rw-r--r--sci-mathematics/pff/metadata.xml11
-rw-r--r--sci-mathematics/pulp/metadata.xml16
-rw-r--r--sci-mathematics/scilab/metadata.xml24
-rw-r--r--sci-mathematics/tisean/metadata.xml16
-rw-r--r--sci-mathematics/ufc/metadata.xml20
-rw-r--r--sci-mathematics/why/metadata.xml28
-rw-r--r--sci-mathematics/why3/metadata.xml18
-rw-r--r--sci-mathematics/yorick/metadata.xml26
-rw-r--r--sci-mathematics/z3/metadata.xml8
-rw-r--r--sci-misc/elmer-elmergrid/metadata.xml16
-rw-r--r--sci-misc/elmer-fem/metadata.xml16
-rw-r--r--sci-misc/elmer-front/metadata.xml16
-rw-r--r--sci-misc/elmer-gui/metadata.xml22
-rw-r--r--sci-misc/elmer-meshgen2d/metadata.xml16
-rw-r--r--sci-misc/elmer-meta/metadata.xml8
-rw-r--r--sci-misc/elmer-post/metadata.xml16
-rw-r--r--sci-misc/finomaton/metadata.xml6
-rw-r--r--sci-misc/foma/metadata.xml6
-rw-r--r--sci-misc/hfst/metadata.xml2
-rw-r--r--sci-misc/irstlm/metadata.xml2
-rw-r--r--sci-misc/jwnl/metadata.xml16
-rw-r--r--sci-misc/kaldi/metadata.xml26
-rw-r--r--sci-misc/kotus-sanalista/metadata.xml8
-rw-r--r--sci-misc/mitlm/metadata.xml16
-rw-r--r--sci-misc/nltk/metadata.xml16
-rw-r--r--sci-misc/omorfi/metadata.xml8
-rw-r--r--sci-misc/openfst/metadata.xml6
-rw-r--r--sci-misc/opennlp-maxent/metadata.xml16
-rw-r--r--sci-misc/praat/metadata.xml16
-rw-r--r--sci-misc/pywordnet/metadata.xml16
-rw-r--r--sci-misc/sfst/metadata.xml10
-rw-r--r--sci-misc/simx/metadata.xml16
-rw-r--r--sci-misc/stanford-parser/metadata.xml8
-rw-r--r--sci-misc/stanford-tagger/metadata.xml8
-rw-r--r--sci-physics/abinit/metadata.xml46
-rw-r--r--sci-physics/bigdft/metadata.xml32
-rw-r--r--sci-physics/elk/metadata.xml28
-rw-r--r--sci-physics/fullprof-bin/metadata.xml18
-rw-r--r--sci-physics/geant-vmc/metadata.xml22
-rw-r--r--sci-physics/genfit/metadata.xml18
-rw-r--r--sci-physics/mc-tester/metadata.xml22
-rw-r--r--sci-physics/openmx/metadata.xml8
-rw-r--r--sci-physics/qcl/metadata.xml2
-rw-r--r--sci-physics/quinoa/metadata.xml18
-rw-r--r--sci-physics/root/metadata.xml36
-rw-r--r--sci-physics/tauola/metadata.xml24
-rw-r--r--sci-physics/vgm/metadata.xml18
-rw-r--r--sci-visualization/forge/metadata.xml26
-rw-r--r--sci-visualization/mricrogl/metadata.xml18
-rw-r--r--sci-visualization/mricron/metadata.xml18
-rw-r--r--sci-visualization/nodemon/metadata.xml2
-rw-r--r--sci-visualization/surf-ice/metadata.xml2
-rw-r--r--sci-visualization/v_sim/metadata.xml26
-rw-r--r--sci-visualization/yt/metadata.xml26
-rw-r--r--sys-cluster/blcr/metadata.xml10
-rw-r--r--sys-cluster/empi/metadata.xml14
-rw-r--r--sys-cluster/hpl/metadata.xml8
-rw-r--r--sys-cluster/htcondor/metadata.xml42
-rw-r--r--sys-cluster/lustre/metadata.xml24
-rw-r--r--sys-cluster/modules/metadata.xml26
-rw-r--r--sys-cluster/mpich2/metadata.xml34
-rw-r--r--sys-cluster/mvapich2/metadata.xml20
-rw-r--r--sys-cluster/openmpi/metadata.xml32
-rw-r--r--sys-cluster/ovis/metadata.xml16
-rw-r--r--sys-cluster/pyslice/metadata.xml20
-rw-r--r--virtual/blacs/metadata.xml16
-rw-r--r--virtual/blas/metadata.xml16
-rw-r--r--virtual/cblas/metadata.xml16
-rw-r--r--virtual/lapack/metadata.xml16
-rw-r--r--virtual/lapacke/metadata.xml16
-rw-r--r--virtual/perl-encoding-warnings/metadata.xml8
-rw-r--r--virtual/scalapack/metadata.xml16
-rw-r--r--x11-libs/agg/metadata.xml16
-rw-r--r--x11-libs/tr/metadata.xml8
-rw-r--r--x11-libs/xview-bin/metadata.xml16
-rw-r--r--x11-libs/xview/metadata.xml16
-rw-r--r--x11-misc/envytools/metadata.xml24
830 files changed, 6711 insertions, 6712 deletions
diff --git a/app-admin/eselect/metadata.xml b/app-admin/eselect/metadata.xml
index d3c30b4c1..8c8d15633 100644
--- a/app-admin/eselect/metadata.xml
+++ b/app-admin/eselect/metadata.xml
@@ -1,7 +1,7 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bicatali@gentoo.org</email>
- </maintainer>
+ <maintainer type="person">
+ <email>bicatali@gentoo.org</email>
+ </maintainer>
</pkgmetadata>
diff --git a/app-benchmarks/btl/metadata.xml b/app-benchmarks/btl/metadata.xml
index 0e64e0503..8ebdfe5fd 100644
--- a/app-benchmarks/btl/metadata.xml
+++ b/app-benchmarks/btl/metadata.xml
@@ -1,17 +1,17 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>andyspiros@gmail.com</email>
- <name>Andrea Arteaga</name>
- <description>Bench Template Library</description>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>This package contains a modified copy of the BTL.</longdescription>
- <upstream>
- <remote-id type="bitbucket">spiros/btl</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>andyspiros@gmail.com</email>
+ <name>Andrea Arteaga</name>
+ <description>Bench Template Library</description>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>This package contains a modified copy of the BTL.</longdescription>
+ <upstream>
+ <remote-id type="bitbucket">spiros/btl</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/app-benchmarks/numbench/metadata.xml b/app-benchmarks/numbench/metadata.xml
index 91ead3a68..9851d9f74 100644
--- a/app-benchmarks/numbench/metadata.xml
+++ b/app-benchmarks/numbench/metadata.xml
@@ -1,17 +1,17 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>andyspiros@gmail.com</email>
- <name>Andrea Arteaga</name>
- <description>Google Summer of Code 2011 student</description>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription>
- <upstream>
- <remote-id type="github">andyspiros/numbench</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>andyspiros@gmail.com</email>
+ <name>Andrea Arteaga</name>
+ <description>Google Summer of Code 2011 student</description>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>This package contains a set of scripts developed during the Google Summer of Code 2011 project. It aims to benchmark numerical libraries, and more precisely implementations of the standard BLAS, CBLAS, LAPACK, PBLAS, ScaLAPACK and the library FFTW.</longdescription>
+ <upstream>
+ <remote-id type="github">andyspiros/numbench</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/app-doc/blacs-docs/metadata.xml b/app-doc/blacs-docs/metadata.xml
index 49201a4d4..b479760c1 100644
--- a/app-doc/blacs-docs/metadata.xml
+++ b/app-doc/blacs-docs/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The BLACS (Basic Linear Algebra Communication Subprograms) project
is an ongoing investigation whose purpose is to create a linear
algebra oriented message passing interface that may be implemented
diff --git a/app-doc/blas-docs/metadata.xml b/app-doc/blas-docs/metadata.xml
index a7f7415dc..636c418b6 100644
--- a/app-doc/blas-docs/metadata.xml
+++ b/app-doc/blas-docs/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
BLAS (Basic Linear Algebra Subroutines) is a set of efficient routines
for most of the basic vector and matrix operations. They are widely
used as the basis for other high quality linear algebra software, for
diff --git a/app-doc/root-docs/metadata.xml b/app-doc/root-docs/metadata.xml
index 27aa72d21..117b7b34c 100644
--- a/app-doc/root-docs/metadata.xml
+++ b/app-doc/root-docs/metadata.xml
@@ -1,22 +1,22 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bircoph@gentoo.org</email>
- <name>Andrew Savchenko</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-physics@gentoo.org</email>
- <name>Gentoo Physics Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>bircoph@gentoo.org</email>
+ <name>Andrew Savchenko</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-physics@gentoo.org</email>
+ <name>Gentoo Physics Project</name>
+ </maintainer>
+ <longdescription lang="en">
This package contains the automatically generated ROOT class
documentation.
</longdescription>
- <use>
- <flag name="api">Generate html API documentation</flag>
- <flag name="http">Build HttpServer documentation</flag>
- <flag name="math">Provide all math related documentation</flag>
- <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag>
- </use>
+ <use>
+ <flag name="api">Generate html API documentation</flag>
+ <flag name="http">Build HttpServer documentation</flag>
+ <flag name="math">Provide all math related documentation</flag>
+ <flag name="metric">Default to A4 paper size and metric measurement. Letter will be used otherwise</flag>
+ </use>
</pkgmetadata>
diff --git a/app-forensics/vine/metadata.xml b/app-forensics/vine/metadata.xml
index cabecde27..9dee8db11 100644
--- a/app-forensics/vine/metadata.xml
+++ b/app-forensics/vine/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>ottxor@gentoo.org</email>
- <name>Christoph Junghans</name>
- </maintainer>
+ <maintainer type="person">
+ <email>ottxor@gentoo.org</email>
+ <name>Christoph Junghans</name>
+ </maintainer>
</pkgmetadata>
diff --git a/app-portage/g-octave/metadata.xml b/app-portage/g-octave/metadata.xml
index d8ba483ee..0f04e0b21 100644
--- a/app-portage/g-octave/metadata.xml
+++ b/app-portage/g-octave/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>rafael@rafaelmartins.eng.br</email>
- <name>Rafael Goncalves Martins</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>rafael@rafaelmartins.eng.br</email>
+ <name>Rafael Goncalves Martins</name>
+ </maintainer>
+ <longdescription lang="en">
g-octave is a tool that generates and installs ebuilds for Octave-Forge
packages "on-the-fly" to Gentoo Linux, using Portage. It's capable to
generate ebuilds and Manifest files for the packages, and to install
diff --git a/app-vim/vim-gromacs/metadata.xml b/app-vim/vim-gromacs/metadata.xml
index 4a5c9ab9d..b0b58dd8d 100644
--- a/app-vim/vim-gromacs/metadata.xml
+++ b/app-vim/vim-gromacs/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-chemistry@gentoo.org</email>
- <name>Gentoo Chemistry Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-chemistry@gentoo.org</email>
+ <name>Gentoo Chemistry Project</name>
+ </maintainer>
+ <longdescription lang="en">
VIM syntax plugin which provides syntax highlighting for the gromacs files.
</longdescription>
- <upstream>
- <remote-id type="github">HubLot/vim-gromacs</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">HubLot/vim-gromacs</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-cpp/eigen/metadata.xml b/dev-cpp/eigen/metadata.xml
index 6d5cb6666..b4b6e1b4d 100644
--- a/dev-cpp/eigen/metadata.xml
+++ b/dev-cpp/eigen/metadata.xml
@@ -1,34 +1,34 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
Eigen is a lightweight C++ template library for vector and matrix math,
a.k.a. linear algebra. Unlike most other linear algebra libraries, Eigen
focuses on the simple mathematical needs of applications: games and other
OpenGL apps, spreadsheets and other office apps, etc. Eigen is dedicated to
providing optimal speed with GCC.
</longdescription>
- <use>
- <flag name="adolc">
+ <use>
+ <flag name="adolc">
Enable automatic differentiation using <pkg>sci-libs/adolc</pkg>
</flag>
- <flag name="metis">
+ <flag name="metis">
Enable matrix partitioning using <pkg>sci-libs/metis</pkg></flag>
- <flag name="mkl">
+ <flag name="mkl">
Use propertary intel blas/lapack implementation through <pkg>sci-libs/mkl</pkg>
</flag>
- <flag name="pastix">
+ <flag name="pastix">
Enable large scale direct solver with using <pkg>sci-libs/pastix</pkg>
</flag>
- <flag name="sparse">
+ <flag name="sparse">
Enable use for extra sparse matrix with <pkg>sci-libs/umfpack</pkg>, <pkg>sci-libs/cholmod</pkg>, <pkg>sci-libs/superlu</pkg> and <pkg>dev-cpp/sparsehash</pkg>
</flag>
- </use>
- <upstream>
- <remote-id type="bitbucket">eigen/eigen</remote-id>
- </upstream>
+ </use>
+ <upstream>
+ <remote-id type="bitbucket">eigen/eigen</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-cpp/growler-arch/metadata.xml b/dev-cpp/growler-arch/metadata.xml
index 6ddf36355..56f547ec6 100644
--- a/dev-cpp/growler-arch/metadata.xml
+++ b/dev-cpp/growler-arch/metadata.xml
@@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>Growler-Arch is the set growler libraries and utilities that provide a distributed object architecture and environment.</longdescription>
</pkgmetadata>
diff --git a/dev-cpp/growler-core/metadata.xml b/dev-cpp/growler-core/metadata.xml
index d3ff5e92a..b33ec1a13 100644
--- a/dev-cpp/growler-core/metadata.xml
+++ b/dev-cpp/growler-core/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>
Growler-Core provides a large set of mainly general-purpose classes and
functionality for developing and using the Growler Distributed Component
Architecture.
diff --git a/dev-cpp/growler-link/metadata.xml b/dev-cpp/growler-link/metadata.xml
index b436d6bce..64aa8eb6a 100644
--- a/dev-cpp/growler-link/metadata.xml
+++ b/dev-cpp/growler-link/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>
Growler-Link is the lowest-level Growler package. It provides basic support for
dynamic linking, components and modules, as well as several other of Growler's
commonly used API's, such as Clogger.
diff --git a/dev-cpp/growler-math/metadata.xml b/dev-cpp/growler-math/metadata.xml
index 4f4b88027..d284223c7 100644
--- a/dev-cpp/growler-math/metadata.xml
+++ b/dev-cpp/growler-math/metadata.xml
@@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>Growler-Math provides a set of math-related classes and functionality</longdescription>
</pkgmetadata>
diff --git a/dev-cpp/growler-thread/metadata.xml b/dev-cpp/growler-thread/metadata.xml
index 13e10be3d..5800a84ea 100644
--- a/dev-cpp/growler-thread/metadata.xml
+++ b/dev-cpp/growler-thread/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>
Growler-Thread is a pthread wrapper library used by Growler. It provides
support for creating threads, and for common multithreading tasks
</longdescription>
diff --git a/dev-cpp/growler/metadata.xml b/dev-cpp/growler/metadata.xml
index ebad0883d..7fd7dac50 100644
--- a/dev-cpp/growler/metadata.xml
+++ b/dev-cpp/growler/metadata.xml
@@ -1,9 +1,9 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>bryan.d.green@nasa.gov</email>
- <name>Bryan Green</name>
- </maintainer>
- <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription>
+ <maintainer type="person">
+ <email>bryan.d.green@nasa.gov</email>
+ <name>Bryan Green</name>
+ </maintainer>
+ <longdescription>Growler is a C++-based distributed object and event architecture.</longdescription>
</pkgmetadata>
diff --git a/dev-cpp/icnc/metadata.xml b/dev-cpp/icnc/metadata.xml
index 1b36049c6..9dee8db11 100644
--- a/dev-cpp/icnc/metadata.xml
+++ b/dev-cpp/icnc/metadata.xml
@@ -1,8 +1,8 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>ottxor@gentoo.org</email>
- <name>Christoph Junghans</name>
- </maintainer>
+ <maintainer type="person">
+ <email>ottxor@gentoo.org</email>
+ <name>Christoph Junghans</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-java/fits/metadata.xml b/dev-java/fits/metadata.xml
index aab84e6a7..0b1cc63ad 100644
--- a/dev-java/fits/metadata.xml
+++ b/dev-java/fits/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
Java library which provides I/O for FITS images and binary tables. The Java
libraries support all basic FITS formats and gzip compressed
files. Support for access to data subsets is included and the
diff --git a/dev-java/flexdock/metadata.xml b/dev-java/flexdock/metadata.xml
index f864524db..6d57dc37c 100644
--- a/dev-java/flexdock/metadata.xml
+++ b/dev-java/flexdock/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
Java docking framework for use in cross-platform Swing applications.
</longdescription>
</pkgmetadata>
diff --git a/dev-java/gluegen/metadata.xml b/dev-java/gluegen/metadata.xml
index fa1706ad0..df54bab01 100644
--- a/dev-java/gluegen/metadata.xml
+++ b/dev-java/gluegen/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
GlueGen is a tool which automatically generates the Java and JNI code necessary
to call C libraries. It reads as input ANSI C header files and separate
configuration files which provide control over many aspects of the glue code
@@ -16,7 +16,7 @@ on the IR before glue code emission. GlueGen is currently powerful enough to
bind even low-level APIs such as the Java Native Interface (JNI) and the AWT
Native Interface (JAWT) back up to the Java programming language.
</longdescription>
- <upstream>
- <remote-id type="github">sgothel/gluegen</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">sgothel/gluegen</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-java/hdf-java/metadata.xml b/dev-java/hdf-java/metadata.xml
index 16cedf505..531e47258 100644
--- a/dev-java/hdf-java/metadata.xml
+++ b/dev-java/hdf-java/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
HDF is a versatile data model that can represent very complex data
objects and a wide variety of metadata. It is a completely portable
file format with no limit on the number or size of data objects in
@@ -13,8 +13,8 @@
This Java package implements HDF4/HDF5 data objects in an object-oriented
form. It provides a common Java API for accessing HDF files.
</longdescription>
- <use>
- <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag>
- <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag>
- </use>
+ <use>
+ <flag name="hdf">Add support for the Hierarchical Data Format v.4 (<pkg>sci-libs/hdf</pkg>)</flag>
+ <flag name="hdfview">Build a GUI viewer for all files supported in <pkg>dev-java/hdf-java</pkg></flag>
+ </use>
</pkgmetadata>
diff --git a/dev-java/htsjdk/metadata.xml b/dev-java/htsjdk/metadata.xml
index feb7e6155..e18a4898a 100644
--- a/dev-java/htsjdk/metadata.xml
+++ b/dev-java/htsjdk/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-java/jeuclid-core/metadata.xml b/dev-java/jeuclid-core/metadata.xml
index 5e72e0411..78b3a367d 100644
--- a/dev-java/jeuclid-core/metadata.xml
+++ b/dev-java/jeuclid-core/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
JEuclid is a complete MathML rendering solution, consisting of:
* A MathViewer application
* Command line converters from MathML to other formats
@@ -15,7 +15,7 @@
This package contains the basic JEuclid rendering and document
handling classes.
</longdescription>
- <upstream>
- <remote-id type="sourceforge">jeuclid</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="sourceforge">jeuclid</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-java/jgraphx/metadata.xml b/dev-java/jgraphx/metadata.xml
index ffe33e8c0..49aa77f7c 100644
--- a/dev-java/jgraphx/metadata.xml
+++ b/dev-java/jgraphx/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
JGraph X is based on the mxGraph architecture, a re-designed core
based on JGraph experience.
Overall, JGraph X provides more features that JGraph, with a far
diff --git a/dev-java/jlatexmath-fop/metadata.xml b/dev-java/jlatexmath-fop/metadata.xml
index a5ee94095..cc9ca869b 100644
--- a/dev-java/jlatexmath-fop/metadata.xml
+++ b/dev-java/jlatexmath-fop/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
LaTeXmath library provides a set of Java classes for displaying
(complex) mathematical formulas as part of a Java application with
LateX style. This package installs the plugin for dev-java/fop.
diff --git a/dev-java/jlatexmath/metadata.xml b/dev-java/jlatexmath/metadata.xml
index e2085e4c5..62952f06f 100644
--- a/dev-java/jlatexmath/metadata.xml
+++ b/dev-java/jlatexmath/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
LaTeXmath library provides a set of Java classes for displaying
(complex) mathematical formulas as part of a Java application with
LateX style.
diff --git a/dev-java/jogl/metadata.xml b/dev-java/jogl/metadata.xml
index 88a073443..7a5a6ccdd 100644
--- a/dev-java/jogl/metadata.xml
+++ b/dev-java/jogl/metadata.xml
@@ -1,18 +1,18 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
JOGL provides Java with a Binding for the OpenGL® API (JSR-231), and is designed
to provide hardware-supported 3D graphics to applications written in Java.
</longdescription>
- <use>
- <flag name="cg">Enable NVidia Cg binding.</flag>
- </use>
- <upstream>
- <remote-id type="github">sgothel/jogl</remote-id>
- </upstream>
+ <use>
+ <flag name="cg">Enable NVidia Cg binding.</flag>
+ </use>
+ <upstream>
+ <remote-id type="github">sgothel/jogl</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-java/netcdf/metadata.xml b/dev-java/netcdf/metadata.xml
index 540e5d70e..c49e4ad8f 100644
--- a/dev-java/netcdf/metadata.xml
+++ b/dev-java/netcdf/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The NetCDF-Java Library is a Java interface to NetCDF files,
as well as to many other types of scientific data formats.
</longdescription>
diff --git a/dev-lang/berkeley_upc/metadata.xml b/dev-lang/berkeley_upc/metadata.xml
index 1ebc1d2a3..c4275da80 100644
--- a/dev-lang/berkeley_upc/metadata.xml
+++ b/dev-lang/berkeley_upc/metadata.xml
@@ -1,25 +1,25 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>jauhien@gentoo.org</email>
- <name>Jauhien Piatlicki</name>
- </maintainer>
- <use>
- <flag name="mpi-compat">Enable interoperability with MPI</flag>
- <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag>
- <flag name="segment-fast">
+ <maintainer type="person">
+ <email>jauhien@gentoo.org</email>
+ <name>Jauhien Piatlicki</name>
+ </maintainer>
+ <use>
+ <flag name="mpi-compat">Enable interoperability with MPI</flag>
+ <flag name="pshm">Build UPC Runtime/GASNet with Process-SHared Memory enabled</flag>
+ <flag name="segment-fast">
Select GASNet's FAST segments (default), for the fastest remote access with a possible
cost in max shared memory size
</flag>
- <flag name="segment-large">
+ <flag name="segment-large">
Select GASNet's LARGE segments, for the largest possible shared memory size, at a
possible cost in remote access time
</flag>
- <flag name="single">Support running over smp loopback (no network)</flag>
- <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag>
- <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag>
- <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag>
- <flag name="udp">Support running over UDP</flag>
- </use>
+ <flag name="single">Support running over smp loopback (no network)</flag>
+ <flag name="sptr-packed">Use the more efficient 'packed' shared pointer representation</flag>
+ <flag name="sptr-struct">Use the 'struct' shared pointer representation</flag>
+ <flag name="sptr-symmetric">Enable 'symmetric' pointer variant where available (64-bit smp and shmem)</flag>
+ <flag name="udp">Support running over UDP</flag>
+ </use>
</pkgmetadata>
diff --git a/dev-lang/berkeley_upc_translator/metadata.xml b/dev-lang/berkeley_upc_translator/metadata.xml
index f7d539ea1..c8c5e0f03 100644
--- a/dev-lang/berkeley_upc_translator/metadata.xml
+++ b/dev-lang/berkeley_upc_translator/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>jauhien@gentoo.org</email>
- <name>Jauhien Piatlicki</name>
- </maintainer>
+ <maintainer type="person">
+ <email>jauhien@gentoo.org</email>
+ <name>Jauhien Piatlicki</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-lang/conceptual/metadata.xml b/dev-lang/conceptual/metadata.xml
index 9766ecb5d..c73b3a9fa 100644
--- a/dev-lang/conceptual/metadata.xml
+++ b/dev-lang/conceptual/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>ottxor@gentoo.org</email>
- <name>Christoph Junghans</name>
- </maintainer>
- <use>
- <flag name="gui">Build the Java base graphical interface</flag>
- </use>
- <upstream>
- <remote-id type="sourceforge">conceptual</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>ottxor@gentoo.org</email>
+ <name>Christoph Junghans</name>
+ </maintainer>
+ <use>
+ <flag name="gui">Build the Java base graphical interface</flag>
+ </use>
+ <upstream>
+ <remote-id type="sourceforge">conceptual</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-lang/icc/metadata.xml b/dev-lang/icc/metadata.xml
index 4a2545b28..7731f2960 100644
--- a/dev-lang/icc/metadata.xml
+++ b/dev-lang/icc/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Intel® C++ Compiler is a full featured C/C++ compiler for Intel
based architectures. The compiler supports multi-threading, automatic
processor dispatch, vectorization, auto-parallelization, OpenMP, data
diff --git a/dev-lang/idb/metadata.xml b/dev-lang/idb/metadata.xml
index af02a6866..8bb408f0d 100644
--- a/dev-lang/idb/metadata.xml
+++ b/dev-lang/idb/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Intel® Debugger is a command line debugger for Intel based
architectures. It is well suited with the Intel C++ or Intel FORTRAN
compilers. It also comes also with a graphical interface and extensive
@@ -15,7 +15,7 @@
well. License, terms of qualifications can be found on the web
site and follow the one received in the Intel compilers.
</longdescription>
- <use>
- <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag>
- </use>
+ <use>
+ <flag name="eclipse">Install the <pkg>dev-util/eclipse-sdk</pkg> plugins</flag>
+ </use>
</pkgmetadata>
diff --git a/dev-lang/ifc/metadata.xml b/dev-lang/ifc/metadata.xml
index 2dcae58a6..a2754dff2 100644
--- a/dev-lang/ifc/metadata.xml
+++ b/dev-lang/ifc/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Intel® Fortran Compiler is a full featured FORTRAN 77/95 and
substantial FORTRAN 2003 compiler for Intel based architectures. The
compiler supports multi-threading with automatic processor dispatch,
diff --git a/dev-lang/path64/metadata.xml b/dev-lang/path64/metadata.xml
index ee1012f9f..03dc1bf82 100644
--- a/dev-lang/path64/metadata.xml
+++ b/dev-lang/path64/metadata.xml
@@ -1,20 +1,20 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <longdescription>
The PathScale EKOPath Compiler Suite offers programmers a rich set of tools and
one of the world's most sophisticated optimization infrastructures to maximize
program performance on any Intel 64 or AMD64 platform supporting Intel MMX,
SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2, AMD SSE4A and AVX.
</longdescription>
- <use>
- <flag name="debugger">Build PathDB debugger</flag>
- <flag name="assembler">Build PathAS assembler</flag>
- <flag name="native">Use EKOPath/Path64 for bootstraping</flag>
- <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag>
- </use>
+ <use>
+ <flag name="debugger">Build PathDB debugger</flag>
+ <flag name="assembler">Build PathAS assembler</flag>
+ <flag name="native">Use EKOPath/Path64 for bootstraping</flag>
+ <flag name="valgrind">Support compiler debugging with <pkg>dev-util/valgrind</pkg></flag>
+ </use>
</pkgmetadata>
diff --git a/dev-lang/pgi/metadata.xml b/dev-lang/pgi/metadata.xml
index 93c720670..785285df0 100644
--- a/dev-lang/pgi/metadata.xml
+++ b/dev-lang/pgi/metadata.xml
@@ -1,18 +1,18 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <longdescription>
+ <longdescription>
PGI is the C/C++/Fortran compiler suite of the Portland Group.
</longdescription>
- <maintainer type="person">
- <email>gentryx@gmx.de</email>
- </maintainer>
- <maintainer type="project">
- <email>cluster@gentoo.org</email>
- <name>Gentoo Cluster Project</name>
- </maintainer>
- <use>
- <flag name="java">Install a PGI-tuned JRE.</flag>
- <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag>
- </use>
+ <maintainer type="person">
+ <email>gentryx@gmx.de</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>cluster@gentoo.org</email>
+ <name>Gentoo Cluster Project</name>
+ </maintainer>
+ <use>
+ <flag name="java">Install a PGI-tuned JRE.</flag>
+ <flag name="cuda">Install PGI's CUDA components (e.g. for OpenACC)</flag>
+ </use>
</pkgmetadata>
diff --git a/dev-lang/terra/metadata.xml b/dev-lang/terra/metadata.xml
index 3b7daac27..684a4dc29 100644
--- a/dev-lang/terra/metadata.xml
+++ b/dev-lang/terra/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>ottxor@gentoo.org</email>
- <name>Christoph Junghans</name>
- </maintainer>
- <upstream>
- <remote-id type="github">zdevito/terra</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>ottxor@gentoo.org</email>
+ <name>Christoph Junghans</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">zdevito/terra</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-lang/vtune/metadata.xml b/dev-lang/vtune/metadata.xml
index 18adbb0c0..c46d15bb3 100644
--- a/dev-lang/vtune/metadata.xml
+++ b/dev-lang/vtune/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>nbigaouette@gmail.com</email>
- <name>Nicolas Bigaouette</name>
- </maintainer>
+ <maintainer type="person">
+ <email>nbigaouette@gmail.com</email>
+ <name>Nicolas Bigaouette</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-lang/yaggo/metadata.xml b/dev-lang/yaggo/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-lang/yaggo/metadata.xml
+++ b/dev-lang/yaggo/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-libs/asmjit/metadata.xml b/dev-libs/asmjit/metadata.xml
index b86ea1dd8..be3086e71 100644
--- a/dev-libs/asmjit/metadata.xml
+++ b/dev-libs/asmjit/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
AsmJit is complete x86/x64 JIT-Assembler for C++ language. It supports
32/64-bit x86 processors including all usable extensions (FPU, MMX,
3dNow, SSE, SSE2, SSE3 and SSE4) through type-safe API that mimics Intel
diff --git a/dev-libs/boost-compute/metadata.xml b/dev-libs/boost-compute/metadata.xml
index 50b082f43..23fa5aae7 100644
--- a/dev-libs/boost-compute/metadata.xml
+++ b/dev-libs/boost-compute/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Boost.Compute is a GPU/parallel-computing library for C++ based on
OpenCL. The core library is a thin C++ wrapper over the OpenCL API
and provides access to compute devices, contexts, command queues
and memory buffers.
</longdescription>
- <upstream>
- <remote-id type="github">boostorg/compute</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">boostorg/compute</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-libs/fortrancl/metadata.xml b/dev-libs/fortrancl/metadata.xml
index b46223cbe..1543d123c 100644
--- a/dev-libs/fortrancl/metadata.xml
+++ b/dev-libs/fortrancl/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
FortranCL is an OpenCL interface for Fortran 90. It allows programmers to call
the OpenCL parallel programming framework directly from Fortran, so developers
can accelerate their Fortran code using graphical processing units (GPU) and
diff --git a/dev-libs/intel-common/metadata.xml b/dev-libs/intel-common/metadata.xml
index f880bd7d1..ed553916d 100644
--- a/dev-libs/intel-common/metadata.xml
+++ b/dev-libs/intel-common/metadata.xml
@@ -1,16 +1,16 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
This package contains the core files to be installed for the Intel
compilers and libraries. Probably useless if installed standalone.
</longdescription>
- <use>
- <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag>
- <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag>
- </use>
+ <use>
+ <flag name="compiler">Install the libraries needed for the icc and ifort compilers</flag>
+ <flag name="mic">Install the libraries needed for supporting Intel Many Integrated Core (Xeon Phi)</flag>
+ </use>
</pkgmetadata>
diff --git a/dev-libs/libconfig/metadata.xml b/dev-libs/libconfig/metadata.xml
index 8b29a8e5d..910ab564a 100644
--- a/dev-libs/libconfig/metadata.xml
+++ b/dev-libs/libconfig/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
Libconfig is a simple library for processing structured configuration files.
Libconfig is very compact — a fraction of the size of the expat XML parser library.
This makes it well-suited for memory-constrained systems like handheld devices.
diff --git a/dev-libs/libcuda/metadata.xml b/dev-libs/libcuda/metadata.xml
index 137a77828..1bee8dd17 100644
--- a/dev-libs/libcuda/metadata.xml
+++ b/dev-libs/libcuda/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>alexxy@gentoo.org</email>
- <name>Alexey Shvetsov</name>
- </maintainer>
- <upstream>
- <remote-id type="github">shinpei0208/gdev</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>alexxy@gentoo.org</email>
+ <name>Alexey Shvetsov</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">shinpei0208/gdev</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-libs/libflatarray/metadata.xml b/dev-libs/libflatarray/metadata.xml
index 994e032f1..e130eb4d7 100644
--- a/dev-libs/libflatarray/metadata.xml
+++ b/dev-libs/libflatarray/metadata.xml
@@ -1,22 +1,22 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <longdescription>
+ <longdescription>
LibGeoDecomp is a multi-dimensional C++ array class which provides
an object-oriented view (a.k.a. array of structs, AoS) while
internally storing data in a struct of arrays (SoA) manner. It
comes with utilities to move data to CUDA enabled GPUs.
</longdescription>
- <maintainer type="person">
- <email>gentryx@gmx.de</email>
- </maintainer>
- <maintainer type="project">
- <email>cluster@gentoo.org</email>
- <name>Gentoo Cluster Project</name>
- </maintainer>
- <use>
- <flag name="cuda">
+ <maintainer type="person">
+ <email>gentryx@gmx.de</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>cluster@gentoo.org</email>
+ <name>Gentoo Cluster Project</name>
+ </maintainer>
+ <use>
+ <flag name="cuda">
Enables plugins for NVIDIA GPUs (e.g. CUDAAllocator)
</flag>
- </use>
+ </use>
</pkgmetadata>
diff --git a/dev-libs/libgdev/metadata.xml b/dev-libs/libgdev/metadata.xml
index 137a77828..1bee8dd17 100644
--- a/dev-libs/libgdev/metadata.xml
+++ b/dev-libs/libgdev/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>alexxy@gentoo.org</email>
- <name>Alexey Shvetsov</name>
- </maintainer>
- <upstream>
- <remote-id type="github">shinpei0208/gdev</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>alexxy@gentoo.org</email>
+ <name>Alexey Shvetsov</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">shinpei0208/gdev</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-libs/mxml/metadata.xml b/dev-libs/mxml/metadata.xml
index e769ed6a9..91b1cf5d1 100644
--- a/dev-libs/mxml/metadata.xml
+++ b/dev-libs/mxml/metadata.xml
@@ -1,17 +1,17 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="person">
- <email>cjk34@cam.ac.uk</email>
- <name>Chris Kerr</name>
- <description>I don't develop this software, I'm just a Gentoo user who
+ <maintainer type="person">
+ <email>cjk34@cam.ac.uk</email>
+ <name>Chris Kerr</name>
+ <description>I don't develop this software, I'm just a Gentoo user who
wanted to install it</description>
-</maintainer>
-<maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
-</maintainer>
-<longdescription>Mini-XML is a lightweight, ultra-portable XML library
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>Mini-XML is a lightweight, ultra-portable XML library
that requires only an ANSI C compiler and a 'make' program.</longdescription>
-<use/>
+ <use/>
</pkgmetadata>
diff --git a/dev-libs/opencl-clhpp/metadata.xml b/dev-libs/opencl-clhpp/metadata.xml
index 5ef422065..eb09296ba 100644
--- a/dev-libs/opencl-clhpp/metadata.xml
+++ b/dev-libs/opencl-clhpp/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">KhronosGroup/OpenCL-CLHPP</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-libs/simclist/metadata.xml b/dev-libs/simclist/metadata.xml
index bbcd467aa..e795139c5 100644
--- a/dev-libs/simclist/metadata.xml
+++ b/dev-libs/simclist/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
-</maintainer>
-<longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
SimCList is a high quality C (C++ embeddable) library for handling
lists. It exploits several advanced techniques for improving
performance, including freelists, sentinels, automatic sort algorithm
diff --git a/dev-libs/utf8proc/metadata.xml b/dev-libs/utf8proc/metadata.xml
index bea4b0d50..c6efd7d5b 100644
--- a/dev-libs/utf8proc/metadata.xml
+++ b/dev-libs/utf8proc/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
utf8proc is a library for processing UTF-8 encoded Unicode
strings. Some features are Unicode normalization, stripping of
default ignorable characters, case folding and detection of grapheme
@@ -14,7 +14,7 @@
(U+2212) and “Hyphen-Minus” (U+002D, ASCII Minus) all into the ASCII
minus sign, to make them equal for comparisons.
</longdescription>
- <upstream>
- <remote-id type="github">JuliaLang/utf8proc</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">JuliaLang/utf8proc</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-ml/lacaml/metadata.xml b/dev-ml/lacaml/metadata.xml
index d11df4158..e3d0b1f12 100644
--- a/dev-ml/lacaml/metadata.xml
+++ b/dev-ml/lacaml/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
BLAS/LAPACK-interface for OCaml
</longdescription>
- <upstream>
- <remote-id type="bitbucket">mmottl/lacaml</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="bitbucket">mmottl/lacaml</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-ml/mlgmpidl/metadata.xml b/dev-ml/mlgmpidl/metadata.xml
index 0c2629449..02da151ce 100644
--- a/dev-ml/mlgmpidl/metadata.xml
+++ b/dev-ml/mlgmpidl/metadata.xml
@@ -1,17 +1,17 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-mathematics@gentoo.org</email>
- <name>Gentoo Mathematics Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci-mathematics@gentoo.org</email>
+ <name>Gentoo Mathematics Project</name>
+ </maintainer>
+ <longdescription>
MLGMPIDL is a package offering an interface to the GMP and MPFR
libraries for OCaml version 3.07 or higher. The interface offers access
to almost all the functions of the library, and is decomposed into 7
submodules.
</longdescription>
- <use>
- <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag>
- </use>
+ <use>
+ <flag name="mpfr">Add support for <pkg>dev-libs/mpfr</pkg></flag>
+ </use>
</pkgmetadata>
diff --git a/dev-perl/Algorithm-Loops/metadata.xml b/dev-perl/Algorithm-Loops/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Algorithm-Loops/metadata.xml
+++ b/dev-perl/Algorithm-Loops/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/BTLib/metadata.xml b/dev-perl/BTLib/metadata.xml
index aa38b1c12..f872d82fd 100644
--- a/dev-perl/BTLib/metadata.xml
+++ b/dev-perl/BTLib/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-perl/Bio-BigFile/metadata.xml b/dev-perl/Bio-BigFile/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/dev-perl/Bio-BigFile/metadata.xml
+++ b/dev-perl/Bio-BigFile/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/dev-perl/Bio-DB-Das-Chado/metadata.xml b/dev-perl/Bio-DB-Das-Chado/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/dev-perl/Bio-DB-Das-Chado/metadata.xml
+++ b/dev-perl/Bio-DB-Das-Chado/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/dev-perl/Bio-DB-HTS/metadata.xml b/dev-perl/Bio-DB-HTS/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Bio-DB-HTS/metadata.xml
+++ b/dev-perl/Bio-DB-HTS/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Bio-EnsEMBL/metadata.xml b/dev-perl/Bio-EnsEMBL/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Bio-EnsEMBL/metadata.xml
+++ b/dev-perl/Bio-EnsEMBL/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Config-Std/metadata.xml b/dev-perl/Config-Std/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Config-Std/metadata.xml
+++ b/dev-perl/Config-Std/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/DBIx-DBStag/metadata.xml b/dev-perl/DBIx-DBStag/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-perl/DBIx-DBStag/metadata.xml
+++ b/dev-perl/DBIx-DBStag/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Data-Types/metadata.xml b/dev-perl/Data-Types/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Data-Types/metadata.xml
+++ b/dev-perl/Data-Types/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Lab-VISA/metadata.xml b/dev-perl/Lab-VISA/metadata.xml
index d7298d70a..90bb64f30 100644
--- a/dev-perl/Lab-VISA/metadata.xml
+++ b/dev-perl/Lab-VISA/metadata.xml
@@ -1,7 +1,7 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mail@akhuettel.de</email>
- </maintainer>
+ <maintainer type="person">
+ <email>mail@akhuettel.de</email>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Log-Cabin/metadata.xml b/dev-perl/Log-Cabin/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-perl/Log-Cabin/metadata.xml
+++ b/dev-perl/Log-Cabin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Scalar-Util-Numeric/metadata.xml b/dev-perl/Scalar-Util-Numeric/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Scalar-Util-Numeric/metadata.xml
+++ b/dev-perl/Scalar-Util-Numeric/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Set-IntSpan-Fast/metadata.xml b/dev-perl/Set-IntSpan-Fast/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Set-IntSpan-Fast/metadata.xml
+++ b/dev-perl/Set-IntSpan-Fast/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Text-Graph/metadata.xml b/dev-perl/Text-Graph/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Text-Graph/metadata.xml
+++ b/dev-perl/Text-Graph/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Text-ParseWords/metadata.xml b/dev-perl/Text-ParseWords/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-perl/Text-ParseWords/metadata.xml
+++ b/dev-perl/Text-ParseWords/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Text-RecordParser/metadata.xml b/dev-perl/Text-RecordParser/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-perl/Text-RecordParser/metadata.xml
+++ b/dev-perl/Text-RecordParser/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/Time-Progress/metadata.xml b/dev-perl/Time-Progress/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-perl/Time-Progress/metadata.xml
+++ b/dev-perl/Time-Progress/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/go-db-perl/metadata.xml b/dev-perl/go-db-perl/metadata.xml
index 959160fe4..8417d1580 100644
--- a/dev-perl/go-db-perl/metadata.xml
+++ b/dev-perl/go-db-perl/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/go-perl/metadata.xml b/dev-perl/go-perl/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-perl/go-perl/metadata.xml
+++ b/dev-perl/go-perl/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-perl/opal-client/metadata.xml b/dev-perl/opal-client/metadata.xml
index 1cfc2883a..f475ca517 100644
--- a/dev-perl/opal-client/metadata.xml
+++ b/dev-perl/opal-client/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">opaltoolkit</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">opaltoolkit</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/Forthon/metadata.xml b/dev-python/Forthon/metadata.xml
index 989e06282..d97c22737 100644
--- a/dev-python/Forthon/metadata.xml
+++ b/dev-python/Forthon/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
-<longdescription>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <longdescription>
Forthon generates links between Fortran95 and Python. Python is a high
level, object oriented, interactive and scripting language that allows
a flexible and versatile interface to computational tools. The Forthon
diff --git a/dev-python/GOGrapher/metadata.xml b/dev-python/GOGrapher/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-python/GOGrapher/metadata.xml
+++ b/dev-python/GOGrapher/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/PeakUtils/metadata.xml b/dev-python/PeakUtils/metadata.xml
index 32d3251d5..059847126 100644
--- a/dev-python/PeakUtils/metadata.xml
+++ b/dev-python/PeakUtils/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
As the name implies, this package provides utilities related to the
detection of peaks on 1D data. Includes functions to perform
baseline estimation, to find the indexes of the peaks in the data
and performing Gaussian fitting or centroid computation to further
increase the resolution of the peak detection.
</longdescription>
- <upstream>
- <remote-id type="bitbucket">lucashnegri/peakutils</remote-id>
- <remote-id type="pypi">PeakUtils</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="bitbucket">lucashnegri/peakutils</remote-id>
+ <remote-id type="pypi">PeakUtils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/PyVISA-py/metadata.xml b/dev-python/PyVISA-py/metadata.xml
index 26acc9198..6128d226c 100644
--- a/dev-python/PyVISA-py/metadata.xml
+++ b/dev-python/PyVISA-py/metadata.xml
@@ -1,20 +1,20 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A PyVISA backend that implements a large part of the "Virtual
Instrument Software Architecture" (VISA) in pure Python.
</longdescription>
- <upstream>
- <remote-id type="github">hgrecco/pyvisa-py</remote-id>
- <remote-id type="pypi">PyVISA-py</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">hgrecco/pyvisa-py</remote-id>
+ <remote-id type="pypi">PyVISA-py</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/PyVISA/metadata.xml b/dev-python/PyVISA/metadata.xml
index 19e1a51ca..555e1ea28 100644
--- a/dev-python/PyVISA/metadata.xml
+++ b/dev-python/PyVISA/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A Python package for support of the "Virtual Instrument Software
Architecture" (VISA), in order to control measurement devices and
test equipment via GPIB, RS232, Ethernet or USB.
</longdescription>
- <upstream>
- <remote-id type="github">hgrecco/pyvisa-py</remote-id>
- <remote-id type="pypi">PyVISA</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">hgrecco/pyvisa-py</remote-id>
+ <remote-id type="pypi">PyVISA</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/RecSQL/metadata.xml b/dev-python/RecSQL/metadata.xml
index 355e9a516..a3daeebd2 100644
--- a/dev-python/RecSQL/metadata.xml
+++ b/dev-python/RecSQL/metadata.xml
@@ -1,12 +1,12 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>alexxy@gentoo.org</email>
- <name>Alexey Shvetsov</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>alexxy@gentoo.org</email>
+ <name>Alexey Shvetsov</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/arrayfire-python/metadata.xml b/dev-python/arrayfire-python/metadata.xml
index 12f0d0584..c8d772966 100644
--- a/dev-python/arrayfire-python/metadata.xml
+++ b/dev-python/arrayfire-python/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
ArrayFire is a high performance library for parallel computing
wih an easy-to-use API. This package project Python bindings
for the ArrayFire library.
</longdescription>
- <upstream>
- <remote-id type="github">arrayfire/arrayfire-python</remote-id>
- <remote-id type="pypi">arrayfire</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">arrayfire/arrayfire-python</remote-id>
+ <remote-id type="pypi">arrayfire</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml
index 68d40928a..fec8db663 100644
--- a/dev-python/astropy-helpers/metadata.xml
+++ b/dev-python/astropy-helpers/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
astropy-helpers is a collection of build tools used by astropy
that may be used by other projects.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/astropy-helpers</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/astropy-helpers</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/astropy/metadata.xml b/dev-python/astropy/metadata.xml
index eddb62a26..3d1dc456d 100644
--- a/dev-python/astropy/metadata.xml
+++ b/dev-python/astropy/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/astropysics/metadata.xml b/dev-python/astropysics/metadata.xml
index 1472408f0..0ea741042 100644
--- a/dev-python/astropysics/metadata.xml
+++ b/dev-python/astropysics/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Astropysics leverages a variety of tools already developed for python to simplify
quick-and-dirty calculations and streamline really hard ones. When paired with
an interactive environment, it aims to be a full-featured replacement for IDL
diff --git a/dev-python/astroquery/metadata.xml b/dev-python/astroquery/metadata.xml
index 84e169547..2d17f54cd 100644
--- a/dev-python/astroquery/metadata.xml
+++ b/dev-python/astroquery/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Astroquery is a package containing a collection of tools to use
online astronomical databases. It integrates with Astropy and aims
to support many services with a uniform API.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/astroquery</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/astroquery</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/bcbio-gff/metadata.xml b/dev-python/bcbio-gff/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-python/bcbio-gff/metadata.xml
+++ b/dev-python/bcbio-gff/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/brewer2mpl/metadata.xml b/dev-python/brewer2mpl/metadata.xml
index 42211a68b..e2e66a3e6 100644
--- a/dev-python/brewer2mpl/metadata.xml
+++ b/dev-python/brewer2mpl/metadata.xml
@@ -1,22 +1,22 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
brewer2mpl is a pure Python package for accessing colorbrewer2.org
color maps from Python. With brewer2mpl you can get the raw RGB
colors of all 165 colorbrewer2.org color maps. The color map data
ships with brewer2mpl so no internet connection is required.
</longdescription>
- <upstream>
- <remote-id type="github">jiffyclub/brewer2mpl</remote-id>
- <remote-id type="pypi">brewer2mpl</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">jiffyclub/brewer2mpl</remote-id>
+ <remote-id type="pypi">brewer2mpl</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/busfactor/metadata.xml b/dev-python/busfactor/metadata.xml
index edbc63649..ddd09607c 100644
--- a/dev-python/busfactor/metadata.xml
+++ b/dev-python/busfactor/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-python/ccdproc/metadata.xml b/dev-python/ccdproc/metadata.xml
index e634ec8d8..47d993d8e 100644
--- a/dev-python/ccdproc/metadata.xml
+++ b/dev-python/ccdproc/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
ccdproc is a AstroPy-affliated package for the basic reduction of
CCD images. It provides a framework for accounting for error propagation
and bad pixel tracking through the reduction steps.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/ccdproc</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/ccdproc</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/coards/metadata.xml b/dev-python/coards/metadata.xml
index 77d8a36e7..95bd08e32 100644
--- a/dev-python/coards/metadata.xml
+++ b/dev-python/coards/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>tim@cerazone.net</email>
- <name>Tim Cera</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>tim@cerazone.net</email>
+ <name>Tim Cera</name>
+ </maintainer>
+ <longdescription lang="en">
This module converts between a given COARDS time specification and a Python
datetime object, which is much more useful.
</longdescription>
- <upstream>
- <remote-id type="pypi">coards</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">coards</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/coords/metadata.xml b/dev-python/coords/metadata.xml
index 94198d2ea..3e5eb239e 100644
--- a/dev-python/coords/metadata.xml
+++ b/dev-python/coords/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
coords is a part of Astrolib and provide a set of routines for managing
astronomical coordinate systems
</longdescription>
diff --git a/dev-python/cosmocalc/metadata.xml b/dev-python/cosmocalc/metadata.xml
index 3563cede1..fa2ced1cd 100644
--- a/dev-python/cosmocalc/metadata.xml
+++ b/dev-python/cosmocalc/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Calculate useful values for a given cosmology. This module uses code
adapted from CC.py (James Schombert) which is a Python version of
the Cosmology Calculator (Ned Wright).
diff --git a/dev-python/dijitso/metadata.xml b/dev-python/dijitso/metadata.xml
index cb17acf08..0b22fbbcd 100644
--- a/dev-python/dijitso/metadata.xml
+++ b/dev-python/dijitso/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/dimensionful/metadata.xml b/dev-python/dimensionful/metadata.xml
index c156f9144..cd6735682 100644
--- a/dev-python/dimensionful/metadata.xml
+++ b/dev-python/dimensionful/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
- <upstream>
- <remote-id type="github">caseywstark/dimensionful</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">caseywstark/dimensionful</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ffc/metadata.xml b/dev-python/ffc/metadata.xml
index 35bb1f59e..bf5f22263 100644
--- a/dev-python/ffc/metadata.xml
+++ b/dev-python/ffc/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/ffnet/metadata.xml b/dev-python/ffnet/metadata.xml
index 84e07f038..7bcbdf69d 100644
--- a/dev-python/ffnet/metadata.xml
+++ b/dev-python/ffnet/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
ffnet is a fast and easy-to-use feed-forward neural
network training library for python.
</longdescription>
- <use>
- <flag name="matplotlib">Use matplotlib for drawing</flag>
- </use>
- <upstream>
- <remote-id type="pypi">ffnet</remote-id>
- <remote-id type="sourceforge">ffnet</remote-id>
- </upstream>
+ <use>
+ <flag name="matplotlib">Use matplotlib for drawing</flag>
+ </use>
+ <upstream>
+ <remote-id type="pypi">ffnet</remote-id>
+ <remote-id type="sourceforge">ffnet</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ffnetui/metadata.xml b/dev-python/ffnetui/metadata.xml
index fe996f826..f55ef05e1 100644
--- a/dev-python/ffnetui/metadata.xml
+++ b/dev-python/ffnetui/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
GUI for ffnet - feed forward neural network for python
</longdescription>
- <upstream>
- <remote-id type="pypi">ffnetui</remote-id>
- <remote-id type="sourceforge">ffnet</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">ffnetui</remote-id>
+ <remote-id type="sourceforge">ffnet</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/fiat/metadata.xml b/dev-python/fiat/metadata.xml
index c3aad9140..67ce0c487 100644
--- a/dev-python/fiat/metadata.xml
+++ b/dev-python/fiat/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/gammapy/metadata.xml b/dev-python/gammapy/metadata.xml
index 9ab0a8d12..d691d33fe 100644
--- a/dev-python/gammapy/metadata.xml
+++ b/dev-python/gammapy/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Gammapy is a package for simulating and analysing gamma-ray sky data.
It is currently designed to support users of telescopes such as Fermi,
H.E.S.S, and CTA in primarily Galactic plane survey studies.
</longdescription>
- <upstream>
- <remote-id type="github">gammapy/gammapy</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">gammapy/gammapy</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/gitana/metadata.xml b/dev-python/gitana/metadata.xml
index 221a98348..65ccba066 100644
--- a/dev-python/gitana/metadata.xml
+++ b/dev-python/gitana/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-python/hdf5storage/metadata.xml b/dev-python/hdf5storage/metadata.xml
index 8ce73fe8c..73ae4ea5c 100644
--- a/dev-python/hdf5storage/metadata.xml
+++ b/dev-python/hdf5storage/metadata.xml
@@ -1,23 +1,23 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
This Python package provides high level utilities to read/write a
variety of Python types to/from HDF5 (Heirarchal Data Format)
formatted files. This package also provides support for MATLAB MAT
v7.3 formatted files, which are just HDF5 files with a different
extension and some extra meta-data.
</longdescription>
- <upstream>
- <remote-id type="github">frejanordsiek/hdf5storage</remote-id>
- <remote-id type="pypi">hdf5storage</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">frejanordsiek/hdf5storage</remote-id>
+ <remote-id type="pypi">hdf5storage</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/imageutils/metadata.xml b/dev-python/imageutils/metadata.xml
index 8f422b20a..95065b351 100644
--- a/dev-python/imageutils/metadata.xml
+++ b/dev-python/imageutils/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
imageutils is a collection of image processing utilities that are generally
useful to astronomers. These will likely become part of the core AstroPy
package before the 1.0 release.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/imageutils</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/imageutils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/inference/metadata.xml b/dev-python/inference/metadata.xml
index f93f34858..528a07501 100644
--- a/dev-python/inference/metadata.xml
+++ b/dev-python/inference/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
The inference package is a collection of Python modules implementing
a variety of methods targeting the statistical inference
problems—and the statistical modeling style—of the physical
diff --git a/dev-python/instant/metadata.xml b/dev-python/instant/metadata.xml
index 0aa8827a4..8da29b3a0 100644
--- a/dev-python/instant/metadata.xml
+++ b/dev-python/instant/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/ipykernel/metadata.xml b/dev-python/ipykernel/metadata.xml
index d87bc07db..a938c561c 100644
--- a/dev-python/ipykernel/metadata.xml
+++ b/dev-python/ipykernel/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
This package provides the IPython kernel for Jupyter.
</longdescription>
- <upstream>
- <remote-id type="github">ipython/ipykernel</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">ipython/ipykernel</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ipyparallel/metadata.xml b/dev-python/ipyparallel/metadata.xml
index bd6c5c2e0..d636b5640 100644
--- a/dev-python/ipyparallel/metadata.xml
+++ b/dev-python/ipyparallel/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Interactive Parallel Computing with IPython.
ipyparallel is the new home of IPython.parallel.
</longdescription>
diff --git a/dev-python/ipython_genutils/metadata.xml b/dev-python/ipython_genutils/metadata.xml
index 52164c08d..92090add1 100644
--- a/dev-python/ipython_genutils/metadata.xml
+++ b/dev-python/ipython_genutils/metadata.xml
@@ -1,17 +1,17 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
This package contains some common utilities shared by Jupyter and
IPython projects during The Big Split. As soon as possible, those
packages will remove their dependency on this, and this repo will
go away. No packages outside IPython/Jupyter should depend on it.
</longdescription>
- <upstream>
- <remote-id type="github">ipython/ipython_genutils</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">ipython/ipython_genutils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ipywidgets/metadata.xml b/dev-python/ipywidgets/metadata.xml
index 4495ebb74..7c5fbee17 100644
--- a/dev-python/ipywidgets/metadata.xml
+++ b/dev-python/ipywidgets/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Interactive HTML widgets for Jupyter notebooks and the IPython
kernel.
</longdescription>
- <upstream>
- <remote-id type="pypi">ipywidgets</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">ipywidgets</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/jupyter_client/metadata.xml b/dev-python/jupyter_client/metadata.xml
index fbd1af5b5..e7ee52515 100644
--- a/dev-python/jupyter_client/metadata.xml
+++ b/dev-python/jupyter_client/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Contains the reference implementation of the Jupyter protocol. It
also provides client and kernel management APIs for working with
kernels. It also provides the jupyter kernelspec entrypoint for
diff --git a/dev-python/jupyter_console/metadata.xml b/dev-python/jupyter_console/metadata.xml
index a2b19aeaf..553beaef0 100644
--- a/dev-python/jupyter_console/metadata.xml
+++ b/dev-python/jupyter_console/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A terminal-based console frontend for Jupyter kernels.
This code is based on the single-process IPython terminal.
</longdescription>
diff --git a/dev-python/jupyter_core/metadata.xml b/dev-python/jupyter_core/metadata.xml
index 88e71aa2c..af36b0845 100644
--- a/dev-python/jupyter_core/metadata.xml
+++ b/dev-python/jupyter_core/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Core common functionality of Jupyter projects.
This package contains base application classes and configuration
inhertited by other projects. It doesn't do much on its own.
diff --git a/dev-python/matlab_wrapper/metadata.xml b/dev-python/matlab_wrapper/metadata.xml
index 38df0353a..fc0385f4f 100644
--- a/dev-python/matlab_wrapper/metadata.xml
+++ b/dev-python/matlab_wrapper/metadata.xml
@@ -1,23 +1,23 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
matlab_wrapper allows you to use MATLAB in a convenient way in
Python. You can call MATLAB functions and access workspace
variables directly from your Python scripts and interactive
shell. MATLAB session is started in the background and appears
as a regular Python module.
</longdescription>
- <upstream>
- <remote-id type="github">mrkrd/matlab_wrapper</remote-id>
- <remote-id type="pypi">matlab_wrapper</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">mrkrd/matlab_wrapper</remote-id>
+ <remote-id type="pypi">matlab_wrapper</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/matplotlib-venn/metadata.xml b/dev-python/matplotlib-venn/metadata.xml
index cae4c83f9..6c79256de 100644
--- a/dev-python/matplotlib-venn/metadata.xml
+++ b/dev-python/matplotlib-venn/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="pypi">matplotlib-venn</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="pypi">matplotlib-venn</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/matplotlib2tikz/metadata.xml b/dev-python/matplotlib2tikz/metadata.xml
index 9dc28cbe0..7e9013abe 100644
--- a/dev-python/matplotlib2tikz/metadata.xml
+++ b/dev-python/matplotlib2tikz/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-python/matrix2latex/metadata.xml b/dev-python/matrix2latex/metadata.xml
index e8cce6c4b..c84a3bc91 100644
--- a/dev-python/matrix2latex/metadata.xml
+++ b/dev-python/matrix2latex/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/meshpy/metadata.xml b/dev-python/meshpy/metadata.xml
index 18f3e3730..250f08d0e 100644
--- a/dev-python/meshpy/metadata.xml
+++ b/dev-python/meshpy/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
MeshPy offers quality triangular and tetrahedral mesh generation for Python.
Meshes of this type are chiefly used in finite-element simulation codes, but
also have many other applications ranging from computer graphics to robotics.
@@ -13,7 +13,7 @@ In order to generate these 2D and 3D meshes, MeshPy provides Python interfaces
to two well-regarded mesh generators, Triangle by J. Shewchuk and TetGen by
Hang Si. Both are included in the package in slightly modified versions.
</longdescription>
- <upstream>
- <remote-id type="pypi">MeshPy</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">MeshPy</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/metakernel/metadata.xml b/dev-python/metakernel/metadata.xml
index e0c68c929..15370beff 100644
--- a/dev-python/metakernel/metadata.xml
+++ b/dev-python/metakernel/metadata.xml
@@ -1,17 +1,17 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A Jupyter/IPython kernel template which includes core magic
functions (including help, command and file path completion,
parallel and distributed processing, downloads, and much more).
</longdescription>
- <upstream>
- <remote-id type="github">Calysto/metakernel</remote-id>
- <remote-id type="pypi">metakernel</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">Calysto/metakernel</remote-id>
+ <remote-id type="pypi">metakernel</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/metakernel_bash/metadata.xml b/dev-python/metakernel_bash/metadata.xml
index 286d590e3..932dab97a 100644
--- a/dev-python/metakernel_bash/metadata.xml
+++ b/dev-python/metakernel_bash/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A Bash kernel for Jupyter/IPython, based on MetaKernel.
</longdescription>
- <upstream>
- <remote-id type="github">Calysto/metakernel</remote-id>
- <remote-id type="pypi">metakernel_bash</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">Calysto/metakernel</remote-id>
+ <remote-id type="pypi">metakernel_bash</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/metakernel_python/metadata.xml b/dev-python/metakernel_python/metadata.xml
index aaf6cb9d7..6a1c69057 100644
--- a/dev-python/metakernel_python/metadata.xml
+++ b/dev-python/metakernel_python/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A Python kernel for Jupyter/IPython, based on MetaKernel.
</longdescription>
- <upstream>
- <remote-id type="github">Calysto/metakernel</remote-id>
- <remote-id type="pypi">metakernel_python</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">Calysto/metakernel</remote-id>
+ <remote-id type="pypi">metakernel_python</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/nbconvert/metadata.xml b/dev-python/nbconvert/metadata.xml
index d9cbf5baa..e26b3e53a 100644
--- a/dev-python/nbconvert/metadata.xml
+++ b/dev-python/nbconvert/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Jupyter NBConvert converts Jupyter notebooks to various other
formats via Jinja templates.
</longdescription>
diff --git a/dev-python/nbdime/metadata.xml b/dev-python/nbdime/metadata.xml
index 5a8712352..b57da319a 100644
--- a/dev-python/nbdime/metadata.xml
+++ b/dev-python/nbdime/metadata.xml
@@ -1,20 +1,20 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
nbdime provides tools for diffing and merging of Jupyter Notebooks.
</longdescription>
- <use>
- <flag name="webtools">
+ <use>
+ <flag name="webtools">
Install web-based diff and merge tools.
</flag>
- </use>
+ </use>
</pkgmetadata>
diff --git a/dev-python/nbformat/metadata.xml b/dev-python/nbformat/metadata.xml
index 4788ba53f..d58b06385 100644
--- a/dev-python/nbformat/metadata.xml
+++ b/dev-python/nbformat/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Jupyther nbformat contains the reference implementation of the
Jupyter Notebook format, and Python APIs for working with
notebooks. There is also a JSON schema for notebook format
diff --git a/dev-python/nbviewer/metadata.xml b/dev-python/nbviewer/metadata.xml
index 3b58897ca..fed1faba7 100644
--- a/dev-python/nbviewer/metadata.xml
+++ b/dev-python/nbviewer/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Jupyter nbviewer is the web application behind The Jupyter Notebook
Viewer, which is graciously hosted by Rackspace. Run this locally
to get most of the features of nbviewer on your own network.
diff --git a/dev-python/newrelic/metadata.xml b/dev-python/newrelic/metadata.xml
index 4a7c9adc5..c6f6fe8d4 100644
--- a/dev-python/newrelic/metadata.xml
+++ b/dev-python/newrelic/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Python agent for the New Relic web application performance
monitoring service.
</longdescription>
- <upstream>
- <remote-id type="pypi">newrelic</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">newrelic</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ngslib/metadata.xml b/dev-python/ngslib/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-python/ngslib/metadata.xml
+++ b/dev-python/ngslib/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/notebook/metadata.xml b/dev-python/notebook/metadata.xml
index 8161170dc..36a119d62 100644
--- a/dev-python/notebook/metadata.xml
+++ b/dev-python/notebook/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
The Jupyter HTML notebook is a web-based notebook environment
for interactive computing.
</longdescription>
- <upstream>
- <remote-id type="pypi">notebook</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">notebook</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/omniorbpy/metadata.xml b/dev-python/omniorbpy/metadata.xml
index d47182280..39a7f8b65 100644
--- a/dev-python/omniorbpy/metadata.xml
+++ b/dev-python/omniorbpy/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">omniorb</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">omniorb</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/opal-client/metadata.xml b/dev-python/opal-client/metadata.xml
index 7aac60648..bd5beea0b 100644
--- a/dev-python/opal-client/metadata.xml
+++ b/dev-python/opal-client/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">opaltoolkit</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">opaltoolkit</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pamela/metadata.xml b/dev-python/pamela/metadata.xml
index e55257c75..879389634 100644
--- a/dev-python/pamela/metadata.xml
+++ b/dev-python/pamela/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
An interface to the Pluggable Authentication Modules (PAM) library,
written in pure Python (using ctypes).
</longdescription>
- <upstream>
- <remote-id type="github">minrk/pamela</remote-id>
- <remote-id type="pypi">pamela</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">minrk/pamela</remote-id>
+ <remote-id type="pypi">pamela</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/photutils/metadata.xml b/dev-python/photutils/metadata.xml
index 00ee2183b..d98fc6b24 100644
--- a/dev-python/photutils/metadata.xml
+++ b/dev-python/photutils/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
photutils is a python package for determining photometric properties
of sources in astronomical images. This includes source detection,
centroid and shape parameters, and performing photometry.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/photutils</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/photutils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pickleshare/metadata.xml b/dev-python/pickleshare/metadata.xml
index 967d08889..ae14e7372 100644
--- a/dev-python/pickleshare/metadata.xml
+++ b/dev-python/pickleshare/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Like shelve, a PickleShareDB object acts like a normal dictionary.
Unlike shelve, many processes can access the database
simultaneously. Changing a value in database is immediately visible
@@ -14,7 +14,7 @@
files. Hence the "database" is a directory where all files are
governed by PickleShare.
</longdescription>
- <upstream>
- <remote-id type="github">pickleshare/pickleshare</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">pickleshare/pickleshare</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/prettyplotlib/metadata.xml b/dev-python/prettyplotlib/metadata.xml
index 615f1b6db..a1a656ec9 100644
--- a/dev-python/prettyplotlib/metadata.xml
+++ b/dev-python/prettyplotlib/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <longdescription>
Python matplotlib-enhancer library which painlessly creates
beautiful default matplotlib plots.
</longdescription>
- <upstream>
- <remote-id type="pypi">prettyplotlib</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">prettyplotlib</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/prov/metadata.xml b/dev-python/prov/metadata.xml
index 1b4b150fb..fc3d9fabb 100644
--- a/dev-python/prov/metadata.xml
+++ b/dev-python/prov/metadata.xml
@@ -1,18 +1,18 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>horea.christ@gmail.com</email>
- <name>Horea Christian</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>horea.christ@gmail.com</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
A library for W3C Provenance Data Model supporting PROV-JSON and PROV-XML import/export
</longdescription>
- <upstream>
- <remote-id type="pypi">prov</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">prov</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/psubprocess/metadata.xml b/dev-python/psubprocess/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/dev-python/psubprocess/metadata.xml
+++ b/dev-python/psubprocess/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/ptyprocess/metadata.xml b/dev-python/ptyprocess/metadata.xml
index ea8694355..33094cdb7 100644
--- a/dev-python/ptyprocess/metadata.xml
+++ b/dev-python/ptyprocess/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">pexpect/ptyprocess</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">pexpect/ptyprocess</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/py2bit/metadata.xml b/dev-python/py2bit/metadata.xml
index 71d7d5a6a..4f1030617 100644
--- a/dev-python/py2bit/metadata.xml
+++ b/dev-python/py2bit/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">dpryan79/py2bit</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">dpryan79/py2bit</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pyBigWig/metadata.xml b/dev-python/pyBigWig/metadata.xml
index 764884a58..c4302e542 100644
--- a/dev-python/pyBigWig/metadata.xml
+++ b/dev-python/pyBigWig/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">dpryan79/pyBigWig</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">dpryan79/pyBigWig</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pydotplus/metadata.xml b/dev-python/pydotplus/metadata.xml
index eb80ef0cd..e20862b8a 100644
--- a/dev-python/pydotplus/metadata.xml
+++ b/dev-python/pydotplus/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>horea.christ@gmail.com</email>
- <name>Horea Christian</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>horea.christ@gmail.com</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
PyDotPlus is an improved version of the old pydot project that provides a Python Interface to
Graphviz’s Dot language.
</longdescription>
- <upstream>
- <remote-id type="pypi">pydotplus</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">pydotplus</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pyfftw/metadata.xml b/dev-python/pyfftw/metadata.xml
index 174e4dbdc..bc5ec1bc7 100644
--- a/dev-python/pyfftw/metadata.xml
+++ b/dev-python/pyfftw/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A pythonic wrapper around FFTW, the FFT library, presenting a
unified interface for all the supported transforms.
</longdescription>
- <upstream>
- <remote-id type="pypi">pyFFTW</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">pyFFTW</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pyhdf/metadata.xml b/dev-python/pyhdf/metadata.xml
index d38ca85ff..6a3e3ff5d 100644
--- a/dev-python/pyhdf/metadata.xml
+++ b/dev-python/pyhdf/metadata.xml
@@ -1,18 +1,18 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>gorkypl@gmail.com</email>
- <name>Paweł Rumian</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <use>
- <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag>
- </use>
- <upstream>
- <remote-id type="sourceforge">pysclint</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>gorkypl@gmail.com</email>
+ <name>Paweł Rumian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <use>
+ <flag name="szip">Allow to use <pkg>sci-libs/szip</pkg> for SZIP compression method in SDsetcompress()</flag>
+ </use>
+ <upstream>
+ <remote-id type="sourceforge">pysclint</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pylibconfig2/metadata.xml b/dev-python/pylibconfig2/metadata.xml
index e260b7fe1..78f60d79f 100644
--- a/dev-python/pylibconfig2/metadata.xml
+++ b/dev-python/pylibconfig2/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Pure python library for libconfig syntax.
IO works via strings, and include directives.
@@ -18,8 +18,8 @@
ConfList, ConfGroup, respectively. A config is setup from a string
only, and represented as a string automatically.
</longdescription>
- <upstream>
- <remote-id type="github">heinzK1X/pylibconfig2</remote-id>
- <remote-id type="pypi">pylibconfig2</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">heinzK1X/pylibconfig2</remote-id>
+ <remote-id type="pypi">pylibconfig2</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pynomo/metadata.xml b/dev-python/pynomo/metadata.xml
index f365ddf66..6e70e7086 100644
--- a/dev-python/pynomo/metadata.xml
+++ b/dev-python/pynomo/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>witold.pilat@gmail.com</email>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>witold.pilat@gmail.com</email>
+ </maintainer>
+ <longdescription>
Pynomo is a program to create (pdf) nomographs
(nomograms) using Python interpreter. A nomograph (nomogram) is a
graphical solution to an equation.
</longdescription>
- <upstream>
- <remote-id type="sourceforge">pynomo</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="sourceforge">pynomo</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pysolar/metadata.xml b/dev-python/pysolar/metadata.xml
index fe8be1b12..6e7d0ab03 100644
--- a/dev-python/pysolar/metadata.xml
+++ b/dev-python/pysolar/metadata.xml
@@ -1,18 +1,18 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Pysolar is a collection of Python libraries for simulating the
irradiation of any point on earth by the sun. It includes code for
extremely precise ephemeris calculations, and more. Pysolar can
calculate the location of the sun or the shading percentage as a
function of time for a row of 2-axis tracked panels.
</longdescription>
- <upstream>
- <remote-id type="github">pingswept/pysolar</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">pingswept/pysolar</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/python-ivi/metadata.xml b/dev-python/python-ivi/metadata.xml
index 630240a1d..1944d07dc 100644
--- a/dev-python/python-ivi/metadata.xml
+++ b/dev-python/python-ivi/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Python IVI is a Python-based interpretation of the Interchangeable
Virtual Instrument standard from the IVI foundation. Python IVI can
use Python VXI-11, Python USBTMC, PyVISA, pySerial and linux-gpib to
connect to instruments.
</longdescription>
- <upstream>
- <remote-id type="github">python-ivi/python-ivi</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">python-ivi/python-ivi</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/python-vxi11/metadata.xml b/dev-python/python-vxi11/metadata.xml
index 72510adc7..49ec289af 100644
--- a/dev-python/python-vxi11/metadata.xml
+++ b/dev-python/python-vxi11/metadata.xml
@@ -1,20 +1,20 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Python VXI-11 is a Python implementation of the VXI-11 Ethernet
instrument control protocol. It is compatible with VXI-11,
LXI instruments and VXI-11 to GPIB bridges (HP E2050A, etc.).
</longdescription>
- <upstream>
- <remote-id type="github">python-ivi/python-vxi11</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">python-ivi/python-vxi11</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pythoncgns/metadata.xml b/dev-python/pythoncgns/metadata.xml
index 35f35f0b7..ba0b86026 100644
--- a/dev-python/pythoncgns/metadata.xml
+++ b/dev-python/pythoncgns/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="pypi">CGNS</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="pypi">CGNS</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pythonqt/metadata.xml b/dev-python/pythonqt/metadata.xml
index 364efbdc3..59cf1334d 100644
--- a/dev-python/pythonqt/metadata.xml
+++ b/dev-python/pythonqt/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">pythonqt</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">pythonqt</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/pyvcf/metadata.xml b/dev-python/pyvcf/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-python/pyvcf/metadata.xml
+++ b/dev-python/pyvcf/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-python/qtconsole/metadata.xml b/dev-python/qtconsole/metadata.xml
index 93199c605..49db3eb90 100644
--- a/dev-python/qtconsole/metadata.xml
+++ b/dev-python/qtconsole/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A rich Qt-based console for working with Jupyter kernels,
supporting rich media output, session export, and more.
</longdescription>
diff --git a/dev-python/shove/metadata.xml b/dev-python/shove/metadata.xml
index a5faa4b26..597a68368 100644
--- a/dev-python/shove/metadata.xml
+++ b/dev-python/shove/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">lcrees/shove</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">lcrees/shove</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/snakemake/metadata.xml b/dev-python/snakemake/metadata.xml
index a21e3edfd..cff648bf6 100644
--- a/dev-python/snakemake/metadata.xml
+++ b/dev-python/snakemake/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mschu.dev@gmail.com</email>
- <name>Michael Schubert</name>
- </maintainer>
- <maintainer type="project">
- <email>python@gentoo.org</email>
- <name>Python</name>
- </maintainer>
- <upstream>
- <remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
- <remote-id type="pypi">snakemake</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>python@gentoo.org</email>
+ <name>Python</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="bitbucket">johanneskoester/snakemake</remote-id>
+ <remote-id type="pypi">snakemake</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/specutils/metadata.xml b/dev-python/specutils/metadata.xml
index 6e70cb363..bbb7bb9f3 100644
--- a/dev-python/specutils/metadata.xml
+++ b/dev-python/specutils/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
specutils is a package to implement utilities and data structures to
analyse astronomical spectra within python. It extends NDData from Astropy
into a class with special handling of 1D spectra.
</longdescription>
- <upstream>
- <remote-id type="github">astropy/specutils</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">astropy/specutils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/symengine/metadata.xml b/dev-python/symengine/metadata.xml
index ffc78518d..e8f764b63 100644
--- a/dev-python/symengine/metadata.xml
+++ b/dev-python/symengine/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mschu.dev@gmail.com</email>
- <name>Michael Schubert</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-mathematics@gentoo.org</email>
- <name>Gentoo Mathematics Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">sympy/symengine.py</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-mathematics@gentoo.org</email>
+ <name>Gentoo Mathematics Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">sympy/symengine.py</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/testpath/metadata.xml b/dev-python/testpath/metadata.xml
index 7183f762d..2d4f93498 100644
--- a/dev-python/testpath/metadata.xml
+++ b/dev-python/testpath/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Testpath is a collection of utilities for Python code working with
files and commands. It contains functions to check things on the
filesystem, and tools for mocking system commands and recording
diff --git a/dev-python/traitlets/metadata.xml b/dev-python/traitlets/metadata.xml
index a1cab5d48..cad83b0c6 100644
--- a/dev-python/traitlets/metadata.xml
+++ b/dev-python/traitlets/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
A lightweight pure-Python derivative of Enthought Traits,
used for configuring Python objects. This package powers
the config system of IPython and Jupyter.
</longdescription>
- <upstream>
- <remote-id type="github">ipython/traitlets</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">ipython/traitlets</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/ufl/metadata.xml b/dev-python/ufl/metadata.xml
index 480a531aa..649442138 100644
--- a/dev-python/ufl/metadata.xml
+++ b/dev-python/ufl/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/viper/metadata.xml b/dev-python/viper/metadata.xml
index 18c1efff5..430a78511 100644
--- a/dev-python/viper/metadata.xml
+++ b/dev-python/viper/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-python/widgetsnbextension/metadata.xml b/dev-python/widgetsnbextension/metadata.xml
index 56daebe56..a594f2891 100644
--- a/dev-python/widgetsnbextension/metadata.xml
+++ b/dev-python/widgetsnbextension/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
Interactive HTML widgets for Jupyter notebooks.
</longdescription>
- <upstream>
- <remote-id type="pypi">widgetsnbextension</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="pypi">widgetsnbextension</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-python/xopen/metadata.xml b/dev-python/xopen/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/dev-python/xopen/metadata.xml
+++ b/dev-python/xopen/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/dev-tcltk/img_rotate/metadata.xml b/dev-tcltk/img_rotate/metadata.xml
index 2cb3f2bf3..f1310b451 100644
--- a/dev-tcltk/img_rotate/metadata.xml
+++ b/dev-tcltk/img_rotate/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/dev-tcltk/togl/metadata.xml b/dev-tcltk/togl/metadata.xml
index 9499d8d89..c191e6dbe 100644
--- a/dev-tcltk/togl/metadata.xml
+++ b/dev-tcltk/togl/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">togl</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">togl</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-tex/pythontex/metadata.xml b/dev-tex/pythontex/metadata.xml
index dc4de7cb4..02c7c504c 100644
--- a/dev-tex/pythontex/metadata.xml
+++ b/dev-tex/pythontex/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <use>
- <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag>
- </use>
- <upstream>
- <remote-id type="github">gpoore/pythontex</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <use>
+ <flag name="highlighting">PLEASE FIX MY DESCRIPTION</flag>
+ </use>
+ <upstream>
+ <remote-id type="github">gpoore/pythontex</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-util/VampirTrace/metadata.xml b/dev-util/VampirTrace/metadata.xml
index 925a26dfa..30bd07139 100644
--- a/dev-util/VampirTrace/metadata.xml
+++ b/dev-util/VampirTrace/metadata.xml
@@ -1,19 +1,19 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <longdescription>
+ <longdescription>
VampirTrace is an open source library that allows detailed logging of program execution for parallel applications using message passing (MPI) and threads (OpenMP), Pthreads). Besides these typical parallelization paradigms, VampirTrace is capable of tracing GPU accelerated applications and generates exact time stamps for all GPU related events.
</longdescription>
- <maintainer type="person">
- <email>gentryx@gmx.de</email>
- </maintainer>
- <maintainer type="project">
- <email>cluster@gentoo.org</email>
- <name>Gentoo Cluster Project</name>
- </maintainer>
- <use>
- <flag name="cuda">
+ <maintainer type="person">
+ <email>gentryx@gmx.de</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>cluster@gentoo.org</email>
+ <name>Gentoo Cluster Project</name>
+ </maintainer>
+ <use>
+ <flag name="cuda">
Enable tracing of CUDA calls and GPU kernels.
</flag>
- </use>
+ </use>
</pkgmetadata>
diff --git a/dev-util/amdapp/metadata.xml b/dev-util/amdapp/metadata.xml
index c26897c19..4557d6be7 100644
--- a/dev-util/amdapp/metadata.xml
+++ b/dev-util/amdapp/metadata.xml
@@ -1,18 +1,18 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <longdescription>
+ <longdescription>
AMD Accelerated Parallel Processing (APP) is an SDK which includes
the Bolt libraries and an OpenCL implementation for AMD's CPUs and GPUs.
</longdescription>
- <maintainer type="person">
- <email>gentryx@gmx.de</email>
- </maintainer>
- <maintainer type="project">
- <email>cluster@gentoo.org</email>
- <name>Gentoo Cluster Project</name>
- </maintainer>
- <use>
- <flag name="examples">Build the OpenCL example programs</flag>
- </use>
+ <maintainer type="person">
+ <email>gentryx@gmx.de</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>cluster@gentoo.org</email>
+ <name>Gentoo Cluster Project</name>
+ </maintainer>
+ <use>
+ <flag name="examples">Build the OpenCL example programs</flag>
+ </use>
</pkgmetadata>
diff --git a/dev-util/emscripten-fastcomp/metadata.xml b/dev-util/emscripten-fastcomp/metadata.xml
index ee38ab80a..89b91870f 100644
--- a/dev-util/emscripten-fastcomp/metadata.xml
+++ b/dev-util/emscripten-fastcomp/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-util/emscripten/metadata.xml b/dev-util/emscripten/metadata.xml
index bbd406949..b2ee118ca 100644
--- a/dev-util/emscripten/metadata.xml
+++ b/dev-util/emscripten/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/dev-util/mad-numdiff/metadata.xml b/dev-util/mad-numdiff/metadata.xml
index 729575510..327c383a6 100644
--- a/dev-util/mad-numdiff/metadata.xml
+++ b/dev-util/mad-numdiff/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>junghans@gentoo.org</email>
- <name>Christoph Junghans</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-physics@gentoo.org</email>
- <name>Gentoo Physics Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">quinoacomputing/ndiff</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>junghans@gentoo.org</email>
+ <name>Christoph Junghans</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-physics@gentoo.org</email>
+ <name>Gentoo Physics Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">quinoacomputing/ndiff</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/dev-util/ndiff/metadata.xml b/dev-util/ndiff/metadata.xml
index cf0cf4a0a..27bcacd8e 100644
--- a/dev-util/ndiff/metadata.xml
+++ b/dev-util/ndiff/metadata.xml
@@ -5,7 +5,7 @@
<email>AstroFloyd@gmail.com</email>
<name>AstroFloyd</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci@gentoo.org</email>
<name>Gentoo Science Project</name>
</maintainer>
diff --git a/dev-util/nvidia-cuda-gdk/metadata.xml b/dev-util/nvidia-cuda-gdk/metadata.xml
index 089f3983a..36d95e29b 100644
--- a/dev-util/nvidia-cuda-gdk/metadata.xml
+++ b/dev-util/nvidia-cuda-gdk/metadata.xml
@@ -1,24 +1,24 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
The GPU Deployment Kit (previously known as the Tesla Deployment
Kit) is a set of tools provided for the NVIDIA Tesla™, GRID™ and
Quadro™ GPUs.
</longdescription>
- <use>
- <flag name="healthmon">Install nvidia-healthmon.</flag>
- <flag name="nvml">Install the NVIDIA Managment Library.</flag>
- <flag name="nvvs">
+ <use>
+ <flag name="healthmon">Install nvidia-healthmon.</flag>
+ <flag name="nvml">Install the NVIDIA Managment Library.</flag>
+ <flag name="nvvs">
Install the NVIDIA Validation Suite.
</flag>
- </use>
+ </use>
</pkgmetadata>
diff --git a/media-gfx/PhiloGL/metadata.xml b/media-gfx/PhiloGL/metadata.xml
index 06dd1e4b1..c62a87f48 100644
--- a/media-gfx/PhiloGL/metadata.xml
+++ b/media-gfx/PhiloGL/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>xarthisius@gentoo.org</email>
- <name>Kacper Kowalik</name>
- </maintainer>
+ <maintainer type="person">
+ <email>xarthisius@gentoo.org</email>
+ <name>Kacper Kowalik</name>
+ </maintainer>
</pkgmetadata>
diff --git a/media-gfx/brlcad/metadata.xml b/media-gfx/brlcad/metadata.xml
index a5755a70a..efdd0d778 100644
--- a/media-gfx/brlcad/metadata.xml
+++ b/media-gfx/brlcad/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>dongxuli2011@gmail.com</email>
- <description>please assign bugs</description>
- </maintainer>
- <maintainer type="person">
- <email>dilfridge@gentoo.org</email>
- <description>proxy-maintainer, please cc on bugs</description>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>dongxuli2011@gmail.com</email>
+ <description>please assign bugs</description>
+ </maintainer>
+ <maintainer type="person">
+ <email>dilfridge@gentoo.org</email>
+ <description>proxy-maintainer, please cc on bugs</description>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
BRL-CAD is a Combinatorial/Constructive Solid Geometry (CSG)
solid modeling system that includes an interactive geometry editor,
ray-tracing support for rendering and geometric analysis,
@@ -29,12 +29,12 @@
Geometry (NMG) data structures for surface-based solid models and
photon mapping.
</longdescription>
- <use>
- <flag name="benchmarks">
+ <use>
+ <flag name="benchmarks">
Run benchmarks during test phase (need test option enabled)
</flag>
- </use>
- <upstream>
- <remote-id type="sourceforge">brlcad</remote-id>
- </upstream>
+ </use>
+ <upstream>
+ <remote-id type="sourceforge">brlcad</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/media-gfx/librecad/metadata.xml b/media-gfx/librecad/metadata.xml
index 83d16d787..d6b140c97 100644
--- a/media-gfx/librecad/metadata.xml
+++ b/media-gfx/librecad/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>slis@gentoo.org</email>
- </maintainer>
- <use>
- <flag name="3d">Require all 2D coordinates stored as 3D</flag>
- <flag name="tools">Build additional tool programs: tff2lff</flag>
- </use>
- <upstream>
- <remote-id type="github">LibreCAD/LibreCAD</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>slis@gentoo.org</email>
+ </maintainer>
+ <use>
+ <flag name="3d">Require all 2D coordinates stored as 3D</flag>
+ <flag name="tools">Build additional tool programs: tff2lff</flag>
+ </use>
+ <upstream>
+ <remote-id type="github">LibreCAD/LibreCAD</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/media-libs/avbin-bin/metadata.xml b/media-libs/avbin-bin/metadata.xml
index f48f5eaa0..633797339 100644
--- a/media-libs/avbin-bin/metadata.xml
+++ b/media-libs/avbin-bin/metadata.xml
@@ -1,13 +1,13 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>grozin@gentoo.org</email>
- <name>Andrey Grozin</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription>
+ <maintainer type="person">
+ <email>grozin@gentoo.org</email>
+ <name>Andrey Grozin</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>AVbin is a thin wrapper around FFmpeg</longdescription>
</pkgmetadata>
diff --git a/media-libs/glbinding/metadata.xml b/media-libs/glbinding/metadata.xml
index 5f82e29cb..2fa046d66 100644
--- a/media-libs/glbinding/metadata.xml
+++ b/media-libs/glbinding/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>marbre@linux.sungazer.de</email>
- <name>Marius Brehler</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>marbre@linux.sungazer.de</email>
+ <name>Marius Brehler</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
glbinding leverages modern C++11 features like enum classes,
lambdas, and variadic templates, instead of relying on macros; all
OpenGL symbols are real functions and variables. It provides
@@ -21,7 +21,7 @@
(gl.xml) glbinding is generated using python scripts and templates
that can be easily adapted to fit custom needs.
</longdescription>
- <upstream>
- <remote-id type="github">cginternals/glbinding</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">cginternals/glbinding</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/net-ftp/bbftp-client/metadata.xml b/net-ftp/bbftp-client/metadata.xml
index f80d23ed1..a5b1bdacc 100644
--- a/net-ftp/bbftp-client/metadata.xml
+++ b/net-ftp/bbftp-client/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
bbFTP is a file transfer software. It implements its own transfer protocol,
which is optimized for large files (larger than 2GB) and secure as it does not
read the password in a file and encrypts the connection information.
diff --git a/net-ftp/bbftp-server/metadata.xml b/net-ftp/bbftp-server/metadata.xml
index f80d23ed1..a5b1bdacc 100644
--- a/net-ftp/bbftp-server/metadata.xml
+++ b/net-ftp/bbftp-server/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
bbFTP is a file transfer software. It implements its own transfer protocol,
which is optimized for large files (larger than 2GB) and secure as it does not
read the password in a file and encrypts the connection information.
diff --git a/net-misc/bbscp/metadata.xml b/net-misc/bbscp/metadata.xml
index bde1b72a7..b398694d2 100644
--- a/net-misc/bbscp/metadata.xml
+++ b/net-misc/bbscp/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>
bbSCP is a wrapper that provides an SCP-like interface to bbFTP.
</longdescription>
</pkgmetadata>
diff --git a/net-misc/cernbox-client/metadata.xml b/net-misc/cernbox-client/metadata.xml
index 1a378d6f4..039060696 100644
--- a/net-misc/cernbox-client/metadata.xml
+++ b/net-misc/cernbox-client/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-physics@gentoo.org</email>
- <name>Gentoo Physics Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-physics@gentoo.org</email>
+ <name>Gentoo Physics Project</name>
+ </maintainer>
+ <longdescription lang="en">
This service provides a cloud synchronisation service for all CERN users between personal devices (like a laptop) and a centrally-managed data storage.
Available to all CERN users. This service provides synchronisation capabilities:
@@ -16,12 +16,12 @@
The service is not suitable for critical-path activities like data acquisition, world-wide data distribution and massive batch processing.
</longdescription>
- <use>
- <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag>
- <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag>
- <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag>
- </use>
- <upstream>
- <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc>
- </upstream>
+ <use>
+ <flag name="dolphin">Install the <pkg>kde-apps/dolphin</pkg> extension</flag>
+ <flag name="nautilus">Install the <pkg>gnome-base/nautilus</pkg> extension</flag>
+ <flag name="sftp">Enable sftp transfer support via <pkg>net-libs/libssh</pkg></flag>
+ </use>
+ <upstream>
+ <doc>http://cernbox.web.cern.ch/cernbox/00_getting_started/index.html</doc>
+ </upstream>
</pkgmetadata>
diff --git a/perl-core/encoding-warnings/metadata.xml b/perl-core/encoding-warnings/metadata.xml
index d7298d70a..90bb64f30 100644
--- a/perl-core/encoding-warnings/metadata.xml
+++ b/perl-core/encoding-warnings/metadata.xml
@@ -1,7 +1,7 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mail@akhuettel.de</email>
- </maintainer>
+ <maintainer type="person">
+ <email>mail@akhuettel.de</email>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-astronomy/bpz/metadata.xml b/sci-astronomy/bpz/metadata.xml
index 8eb205b89..b57d8eab6 100644
--- a/sci-astronomy/bpz/metadata.xml
+++ b/sci-astronomy/bpz/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Bayesian Photometric Redshifts is a method to infere photometric
redshifts of galaxies.
</longdescription>
diff --git a/sci-astronomy/eazy/metadata.xml b/sci-astronomy/eazy/metadata.xml
index 277bb09c5..695876072 100644
--- a/sci-astronomy/eazy/metadata.xml
+++ b/sci-astronomy/eazy/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Easy and Accurate Zphot from Yale is a photometric redshift code
designed to produce high-quality redshifts from 0 to 4 for situations
where complete spectroscopic calibration samples are not available.
diff --git a/sci-astronomy/eye/metadata.xml b/sci-astronomy/eye/metadata.xml
index 733ea2726..964c66ad9 100644
--- a/sci-astronomy/eye/metadata.xml
+++ b/sci-astronomy/eye/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
In EyE (Enhance Your Extraction) an artificial neural network
connected to pixels of a moving window (retina) is trained to
associate these input stimuli to the corresponding response in one
diff --git a/sci-astronomy/galfit-bin/metadata.xml b/sci-astronomy/galfit-bin/metadata.xml
index d66d6253b..6b4fa6b4a 100644
--- a/sci-astronomy/galfit-bin/metadata.xml
+++ b/sci-astronomy/galfit-bin/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
GALFIT is a data analysis algorithm that fits 2-D analytic functions
to galaxies and point sources directly to digital images.
</longdescription>
diff --git a/sci-astronomy/lephare/metadata.xml b/sci-astronomy/lephare/metadata.xml
index ccde13979..508212313 100644
--- a/sci-astronomy/lephare/metadata.xml
+++ b/sci-astronomy/lephare/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Le Photometric Analysis for Redshift Estimate is a set of commands
to compute photometric redshifts and to perform SED fitting.
</longdescription>
diff --git a/sci-astronomy/libthesky/metadata.xml b/sci-astronomy/libthesky/metadata.xml
index 374f32bf7..1ce9631c7 100644
--- a/sci-astronomy/libthesky/metadata.xml
+++ b/sci-astronomy/libthesky/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>AstroFloyd@gmail.com</email>
- <name>AstroFloyd</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">libthesky</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>AstroFloyd@gmail.com</email>
+ <name>AstroFloyd</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">libthesky</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-astronomy/missfits/metadata.xml b/sci-astronomy/missfits/metadata.xml
index 3a1cc2498..3115c8d55 100644
--- a/sci-astronomy/missfits/metadata.xml
+++ b/sci-astronomy/missfits/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
MissFITS is a program that performs basic maintenance and packaging
tasks on FITS files using an optimised FITS library. MissFITS can:
* add/edit/remove FITS header keywords
diff --git a/sci-astronomy/mosstack/metadata.xml b/sci-astronomy/mosstack/metadata.xml
index df5606cca..570109a05 100644
--- a/sci-astronomy/mosstack/metadata.xml
+++ b/sci-astronomy/mosstack/metadata.xml
@@ -1,23 +1,23 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mikko.laine@gmail.com</email>
- <name>Mikko Laine</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>mikko.laine@gmail.com</email>
+ <name>Mikko Laine</name>
+ </maintainer>
+ <longdescription>
An open source stacking software for astronomical images taken with a DSLR
camera. Mosstack can calibrate, debayer, register, align and stack photos
taken with modern DSLR's from Canon. It has a command line user interface
inspired by AstroSurf IRIS and a graphical user interface written with PyQt4
</longdescription>
- <use>
- <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes
+ <use>
+ <flag name="opencl">Enables OpenCL support and pulls in pyopencl. This makes
some operations much faster but requires specific hardware and drivers.</flag>
- <flag name="qt4">Pulls in PyQt4. Program works on command line interface
+ <flag name="qt4">Pulls in PyQt4. Program works on command line interface
without it but for GUI the library is required.</flag>
- </use>
- <upstream>
- <remote-id type="bitbucket">mikko_laine/mosstack</remote-id>
- </upstream>
+ </use>
+ <upstream>
+ <remote-id type="bitbucket">mikko_laine/mosstack</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-astronomy/psfex/metadata.xml b/sci-astronomy/psfex/metadata.xml
index 45b00a7e9..5121f0c8d 100644
--- a/sci-astronomy/psfex/metadata.xml
+++ b/sci-astronomy/psfex/metadata.xml
@@ -1,17 +1,17 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
PSFEx (“PSF Extractor”) extracts models of the Point Spread
Function (PSF) from FITS images processed with <pkg>sci-libs/sextractor</pkg>, and
measures the quality of images. The generated PSF models can be used
for model-fitting photometry or morphological analyses.
</longdescription>
-<use>
- <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag>
-</use>
+ <use>
+ <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag>
+ </use>
</pkgmetadata>
diff --git a/sci-astronomy/scamp/metadata.xml b/sci-astronomy/scamp/metadata.xml
index d337960db..5b8a3c398 100644
--- a/sci-astronomy/scamp/metadata.xml
+++ b/sci-astronomy/scamp/metadata.xml
@@ -1,16 +1,16 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
SCAMP computes astrometric and photometric solutions from SExtractor catalogs
and stores them in header files. These headers files can be read by SWarp to
coadd images.
</longdescription>
-<use>
- <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag>
-</use>
+ <use>
+ <flag name="plplot">Build with <pkg>sci-libs/plplot</pkg> to allow diagnostic plots during processing</flag>
+ </use>
</pkgmetadata>
diff --git a/sci-astronomy/sextractor/metadata.xml b/sci-astronomy/sextractor/metadata.xml
index 87b74a0a9..651b20e47 100644
--- a/sci-astronomy/sextractor/metadata.xml
+++ b/sci-astronomy/sextractor/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
-<email>sci-astronomy@gentoo.org</email>
-<name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
SExtractor (Source Extractor) is a program that builds a catalogue of
objects from an astronomical image. Although it is particularly
oriented towards reduction of large scale galaxy-survey data, it
@@ -13,10 +13,10 @@
ability to automatically separate stars and galaxy using neural
networks.
</longdescription>
-<use>
-<flag name="modelfit">
+ <use>
+ <flag name="modelfit">
Enable profile model fitting, needs <pkg>sci-libs/atlas</pkg>
and <pkg>sci-libs/fftw</pkg>
</flag>
-</use>
+ </use>
</pkgmetadata>
diff --git a/sci-astronomy/skymaker/metadata.xml b/sci-astronomy/skymaker/metadata.xml
index a5fb71602..18cb8766d 100644
--- a/sci-astronomy/skymaker/metadata.xml
+++ b/sci-astronomy/skymaker/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
SkyMaker is a program that simulates astronomical images. It accepts
object lists in ASCII generated by the Stuff program to produce
realistic astronomical fields. There are various options for the user:
diff --git a/sci-astronomy/starlink-bin/metadata.xml b/sci-astronomy/starlink-bin/metadata.xml
index 1d4be9081..111f0287a 100644
--- a/sci-astronomy/starlink-bin/metadata.xml
+++ b/sci-astronomy/starlink-bin/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Starlink Project, referred to by users as Starlink and by
developers as simply The Project, was a UK astronomical computing
project which supplied general-purpose data reduction
diff --git a/sci-astronomy/stiff/metadata.xml b/sci-astronomy/stiff/metadata.xml
index 27ad43608..1ab3a27af 100644
--- a/sci-astronomy/stiff/metadata.xml
+++ b/sci-astronomy/stiff/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
STIFF is a program that convert scientific FITS images to the
more popular TIFF, in 8 (grayscale) or 24 (true colour: 3 times 8) bits per
pixel.
diff --git a/sci-astronomy/stilts/metadata.xml b/sci-astronomy/stilts/metadata.xml
index 9a91a45ff..46b14de5c 100644
--- a/sci-astronomy/stilts/metadata.xml
+++ b/sci-astronomy/stilts/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Starlink Tables Infrastructure Library Tool Set is a set of
command-line tools based on STIL, the Starlink Tables Infrastructure
Library. It deals with the processing of tabular data; the package
diff --git a/sci-astronomy/stuff/metadata.xml b/sci-astronomy/stuff/metadata.xml
index c3150e8cd..5970575e9 100644
--- a/sci-astronomy/stuff/metadata.xml
+++ b/sci-astronomy/stuff/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Stuff is a program that simulates “perfect” astronomical
catalogues. It generate object lists in ASCII which can read by the
SkyMaker program to produce realistic astronomical fields.
diff --git a/sci-astronomy/swarp/metadata.xml b/sci-astronomy/swarp/metadata.xml
index 988b2feef..110a1fe70 100644
--- a/sci-astronomy/swarp/metadata.xml
+++ b/sci-astronomy/swarp/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
SWarp takes astronomical FITS images with a WCS-like projection,
resample and stack them all.
</longdescription>
diff --git a/sci-astronomy/topcat/metadata.xml b/sci-astronomy/topcat/metadata.xml
index 70a38f517..4cf0383c9 100644
--- a/sci-astronomy/topcat/metadata.xml
+++ b/sci-astronomy/topcat/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
Tool for OPerations on Catalogues And Tables is an interactive
graphical viewer and editor for tabular data. Its aim is to provide
most of the facilities that astronomers need for analysis and
diff --git a/sci-astronomy/weightwatcher/metadata.xml b/sci-astronomy/weightwatcher/metadata.xml
index 86c4c7dc6..26af98c3c 100644
--- a/sci-astronomy/weightwatcher/metadata.xml
+++ b/sci-astronomy/weightwatcher/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
-<maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
-</maintainer>
-<longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
WeightWatcher is a program that combines weight-maps, flag-maps and
polygon data in order to produce control maps which can directly be
used in astronomical image-processing packages like Drizzle,
diff --git a/sci-astronomy/zebra/metadata.xml b/sci-astronomy/zebra/metadata.xml
index 76eebf20b..ba10176c2 100644
--- a/sci-astronomy/zebra/metadata.xml
+++ b/sci-astronomy/zebra/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-astronomy@gentoo.org</email>
- <name>Gentoo Astronomy Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-astronomy@gentoo.org</email>
+ <name>Gentoo Astronomy Project</name>
+ </maintainer>
+ <longdescription lang="en">
The Zurich Extragalactic Bayesian Redshift Analyzer is a software to
compute and analyze photometric redshifts of galaxies.
ZEBRA combines and extends several of the classical approaches to
diff --git a/sci-biology/ANGLE-bin/metadata.xml b/sci-biology/ANGLE-bin/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/ANGLE-bin/metadata.xml
+++ b/sci-biology/ANGLE-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/AlignGraph/metadata.xml b/sci-biology/AlignGraph/metadata.xml
index 7863f973a..ebfe51ec8 100644
--- a/sci-biology/AlignGraph/metadata.xml
+++ b/sci-biology/AlignGraph/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">baoe/AlignGraph</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">baoe/AlignGraph</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Atlas-Link/metadata.xml b/sci-biology/Atlas-Link/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/Atlas-Link/metadata.xml
+++ b/sci-biology/Atlas-Link/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/Atlas/metadata.xml b/sci-biology/Atlas/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/Atlas/metadata.xml
+++ b/sci-biology/Atlas/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/Atlas2/metadata.xml b/sci-biology/Atlas2/metadata.xml
index 4338746db..7e2e21ffd 100644
--- a/sci-biology/Atlas2/metadata.xml
+++ b/sci-biology/Atlas2/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
Atlas2 is a next-generation sequencing suite of variant analysis
tools specializing in the separation of true SNPs and insertions
and deletions (indels) from sequencing and mapping errors in Whole
Exome Capture Sequencing (WECS) data.
</longdescription>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Atlas_GapFill/metadata.xml b/sci-biology/Atlas_GapFill/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/Atlas_GapFill/metadata.xml
+++ b/sci-biology/Atlas_GapFill/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/BBmap/metadata.xml b/sci-biology/BBmap/metadata.xml
index 75990319d..2ca43ff4d 100644
--- a/sci-biology/BBmap/metadata.xml
+++ b/sci-biology/BBmap/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">bbmap</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">bbmap</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/BG7/metadata.xml b/sci-biology/BG7/metadata.xml
index 8425c0d53..ae9640ffb 100644
--- a/sci-biology/BG7/metadata.xml
+++ b/sci-biology/BG7/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/BRAKER/metadata.xml b/sci-biology/BRAKER/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/BRAKER/metadata.xml
+++ b/sci-biology/BRAKER/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/BRANCH/metadata.xml b/sci-biology/BRANCH/metadata.xml
index ab90aa364..c2ec6485a 100644
--- a/sci-biology/BRANCH/metadata.xml
+++ b/sci-biology/BRANCH/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">baoe/BRANCH</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">baoe/BRANCH</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/BamView/metadata.xml b/sci-biology/BamView/metadata.xml
index ecc16433b..93e06748e 100644
--- a/sci-biology/BamView/metadata.xml
+++ b/sci-biology/BamView/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">bamview</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">bamview</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/BlastToSam/metadata.xml b/sci-biology/BlastToSam/metadata.xml
index 86bbb3764..5a3c7d51d 100644
--- a/sci-biology/BlastToSam/metadata.xml
+++ b/sci-biology/BlastToSam/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">AstrorEnales/BlastToSam</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">AstrorEnales/BlastToSam</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/DisEMBL/metadata.xml b/sci-biology/DisEMBL/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/DisEMBL/metadata.xml
+++ b/sci-biology/DisEMBL/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/EBARDenovo/metadata.xml b/sci-biology/EBARDenovo/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/EBARDenovo/metadata.xml
+++ b/sci-biology/EBARDenovo/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/ESTate/metadata.xml b/sci-biology/ESTate/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/ESTate/metadata.xml
+++ b/sci-biology/ESTate/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/FLASH/metadata.xml b/sci-biology/FLASH/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/FLASH/metadata.xml
+++ b/sci-biology/FLASH/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Fastaq/metadata.xml b/sci-biology/Fastaq/metadata.xml
index 04b6bd54b..d5f0ab569 100644
--- a/sci-biology/Fastaq/metadata.xml
+++ b/sci-biology/Fastaq/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">sanger-pathogens/Fastaq</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">sanger-pathogens/Fastaq</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/GAL/metadata.xml b/sci-biology/GAL/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/GAL/metadata.xml
+++ b/sci-biology/GAL/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/Gambit/metadata.xml b/sci-biology/Gambit/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/Gambit/metadata.xml
+++ b/sci-biology/Gambit/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/ICC/metadata.xml b/sci-biology/ICC/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/ICC/metadata.xml
+++ b/sci-biology/ICC/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/IMAGE/metadata.xml b/sci-biology/IMAGE/metadata.xml
index 3dcd782d1..9c059c62e 100644
--- a/sci-biology/IMAGE/metadata.xml
+++ b/sci-biology/IMAGE/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">image2</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">image2</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/InterMine/metadata.xml b/sci-biology/InterMine/metadata.xml
index 5c9c50b32..0114515a6 100644
--- a/sci-biology/InterMine/metadata.xml
+++ b/sci-biology/InterMine/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">intermine/intermine</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">intermine/intermine</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/KING/metadata.xml b/sci-biology/KING/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/KING/metadata.xml
+++ b/sci-biology/KING/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/KaKs_Calculator/metadata.xml b/sci-biology/KaKs_Calculator/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/KaKs_Calculator/metadata.xml
+++ b/sci-biology/KaKs_Calculator/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/MaSuRCA/metadata.xml b/sci-biology/MaSuRCA/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/MaSuRCA/metadata.xml
+++ b/sci-biology/MaSuRCA/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/MagicViewer/metadata.xml b/sci-biology/MagicViewer/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/MagicViewer/metadata.xml
+++ b/sci-biology/MagicViewer/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/MeV/metadata.xml b/sci-biology/MeV/metadata.xml
index 6ed96d4bc..bd7adb92f 100644
--- a/sci-biology/MeV/metadata.xml
+++ b/sci-biology/MeV/metadata.xml
@@ -1,14 +1,14 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/MochiView/metadata.xml b/sci-biology/MochiView/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/MochiView/metadata.xml
+++ b/sci-biology/MochiView/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/MolBioLib/metadata.xml b/sci-biology/MolBioLib/metadata.xml
index cfa9e50ee..3b9e38617 100644
--- a/sci-biology/MolBioLib/metadata.xml
+++ b/sci-biology/MolBioLib/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">molbiolib</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">molbiolib</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/MuSeqBox/metadata.xml b/sci-biology/MuSeqBox/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/MuSeqBox/metadata.xml
+++ b/sci-biology/MuSeqBox/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/NGSTools/metadata.xml b/sci-biology/NGSTools/metadata.xml
index fe6859dd7..642261079 100644
--- a/sci-biology/NGSTools/metadata.xml
+++ b/sci-biology/NGSTools/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">ngsep</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">ngsep</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/OBO-Edit/metadata.xml b/sci-biology/OBO-Edit/metadata.xml
index 115a34c41..acbbc35a4 100644
--- a/sci-biology/OBO-Edit/metadata.xml
+++ b/sci-biology/OBO-Edit/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/ONTO-PERL/metadata.xml b/sci-biology/ONTO-PERL/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/ONTO-PERL/metadata.xml
+++ b/sci-biology/ONTO-PERL/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/ORFcor/metadata.xml b/sci-biology/ORFcor/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/ORFcor/metadata.xml
+++ b/sci-biology/ORFcor/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/RADtools/metadata.xml b/sci-biology/RADtools/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/RADtools/metadata.xml
+++ b/sci-biology/RADtools/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/RSeQC/metadata.xml b/sci-biology/RSeQC/metadata.xml
index 54bdfb597..5c8442330 100644
--- a/sci-biology/RSeQC/metadata.xml
+++ b/sci-biology/RSeQC/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">rseqc</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">rseqc</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Ray/metadata.xml b/sci-biology/Ray/metadata.xml
index fb7092ff7..982286fb0 100644
--- a/sci-biology/Ray/metadata.xml
+++ b/sci-biology/Ray/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/Rcorrector/metadata.xml b/sci-biology/Rcorrector/metadata.xml
index 7cca6fb36..3d9746ae9 100644
--- a/sci-biology/Rcorrector/metadata.xml
+++ b/sci-biology/Rcorrector/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">mourisl/Rcorrector</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">mourisl/Rcorrector</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/SEECER/metadata.xml b/sci-biology/SEECER/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/SEECER/metadata.xml
+++ b/sci-biology/SEECER/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/SOAPdenovo2/metadata.xml b/sci-biology/SOAPdenovo2/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/SOAPdenovo2/metadata.xml
+++ b/sci-biology/SOAPdenovo2/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/SPAdes/metadata.xml b/sci-biology/SPAdes/metadata.xml
index 4baa30821..f1a8d4826 100644
--- a/sci-biology/SPAdes/metadata.xml
+++ b/sci-biology/SPAdes/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
truSPAdes includes support for Illumina TruSeq Synthetic Long Read technology reads.
hammer and ionhammer are read error correcting modules for Illumina /IonTorrent reads, resp.
dipspades is assembly module for highly polymorphic diploid genomes
diff --git a/sci-biology/SSAKE/metadata.xml b/sci-biology/SSAKE/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/SSAKE/metadata.xml
+++ b/sci-biology/SSAKE/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/STAR/metadata.xml b/sci-biology/STAR/metadata.xml
index f053775b5..1f2f45f25 100644
--- a/sci-biology/STAR/metadata.xml
+++ b/sci-biology/STAR/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">alexdobin/STAR</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">alexdobin/STAR</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Scaffolder-evaluation/metadata.xml b/sci-biology/Scaffolder-evaluation/metadata.xml
index ede9259b5..337db209e 100644
--- a/sci-biology/Scaffolder-evaluation/metadata.xml
+++ b/sci-biology/Scaffolder-evaluation/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">martinghunt/Scaffolder-evaluation</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/SnpEff/metadata.xml b/sci-biology/SnpEff/metadata.xml
index c7accda31..51896f0c1 100644
--- a/sci-biology/SnpEff/metadata.xml
+++ b/sci-biology/SnpEff/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">snpeff</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">snpeff</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/SolexaQA/metadata.xml b/sci-biology/SolexaQA/metadata.xml
index f7714240a..6196a9f60 100644
--- a/sci-biology/SolexaQA/metadata.xml
+++ b/sci-biology/SolexaQA/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">solexaqa</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">solexaqa</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/StarORF/metadata.xml b/sci-biology/StarORF/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/StarORF/metadata.xml
+++ b/sci-biology/StarORF/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/TransDecoder/metadata.xml b/sci-biology/TransDecoder/metadata.xml
index 1a522bbe1..544c79e74 100644
--- a/sci-biology/TransDecoder/metadata.xml
+++ b/sci-biology/TransDecoder/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">TransDecoder/TransDecoder</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">TransDecoder/TransDecoder</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/Trinotate/metadata.xml b/sci-biology/Trinotate/metadata.xml
index b183ac8ee..eaf731f09 100644
--- a/sci-biology/Trinotate/metadata.xml
+++ b/sci-biology/Trinotate/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">Trinotate/Trinotate</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">Trinotate/Trinotate</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/VarScan-bin/metadata.xml b/sci-biology/VarScan-bin/metadata.xml
index 01850f614..eab817006 100644
--- a/sci-biology/VarScan-bin/metadata.xml
+++ b/sci-biology/VarScan-bin/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">dkoboldt/varscan</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">dkoboldt/varscan</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/VarScan/metadata.xml b/sci-biology/VarScan/metadata.xml
index c9cbb67e6..0ab7b8b95 100644
--- a/sci-biology/VarScan/metadata.xml
+++ b/sci-biology/VarScan/metadata.xml
@@ -1,12 +1,12 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">dkoboldt/varscan</remote-id>
- <remote-id type="sourceforge">varscan</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">dkoboldt/varscan</remote-id>
+ <remote-id type="sourceforge">varscan</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/VelvetOptimiser/metadata.xml b/sci-biology/VelvetOptimiser/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/VelvetOptimiser/metadata.xml
+++ b/sci-biology/VelvetOptimiser/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/YASRA/metadata.xml b/sci-biology/YASRA/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/YASRA/metadata.xml
+++ b/sci-biology/YASRA/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/abacas/metadata.xml b/sci-biology/abacas/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/abacas/metadata.xml
+++ b/sci-biology/abacas/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/act-bin/metadata.xml b/sci-biology/act-bin/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/act-bin/metadata.xml
+++ b/sci-biology/act-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/aghermann/metadata.xml b/sci-biology/aghermann/metadata.xml
index b62282781..7d37ce2e8 100644
--- a/sci-biology/aghermann/metadata.xml
+++ b/sci-biology/aghermann/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>johnhommer@gmail.com</email>
- <name>Andrei Zavada</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>johnhommer@gmail.com</email>
+ <name>Andrei Zavada</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
Aghermann is a program designed around a common workflow in
sleep-research, complete with scoring facility; cairo subpixel
drawing on screen or to file; conventional PSD and EEG Micrcontinuity
diff --git a/sci-biology/align_to_scf/metadata.xml b/sci-biology/align_to_scf/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/align_to_scf/metadata.xml
+++ b/sci-biology/align_to_scf/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml
index 5b2ca1a74..5c72bf01a 100644
--- a/sci-biology/amos/metadata.xml
+++ b/sci-biology/amos/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
AMOS is collection of tools and class interfaces for the assembly of DNA
sequencing reads. The package includes a robust infrastructure, modular assembly
pipelines, and tools for overlapping, consensus generation, contigging, and
assembly manipulation
</longdescription>
- <upstream>
- <remote-id type="sourceforge">amos</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="sourceforge">amos</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/ampliconnoise/metadata.xml b/sci-biology/ampliconnoise/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/ampliconnoise/metadata.xml
+++ b/sci-biology/ampliconnoise/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/angsd/metadata.xml b/sci-biology/angsd/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/angsd/metadata.xml
+++ b/sci-biology/angsd/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/ants/metadata.xml b/sci-biology/ants/metadata.xml
index 71c2ce955..6f359a5c0 100644
--- a/sci-biology/ants/metadata.xml
+++ b/sci-biology/ants/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud).
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription>ANTs extracts information from complex datasets that include imaging (Word Cloud).
Paired with ANTsR (answer), ANTs is useful for managing, interpreting and visualizing multidimensional
data. ANTs is popularly considered a state-of-the-art medical image registration and segmentation
toolkit. ANTsR is an emerging tool supporting standardized multimodality image analysis. ANTs depends
diff --git a/sci-biology/apollo/metadata.xml b/sci-biology/apollo/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/apollo/metadata.xml
+++ b/sci-biology/apollo/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/arachne/metadata.xml b/sci-biology/arachne/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/arachne/metadata.xml
+++ b/sci-biology/arachne/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/argo-bin/metadata.xml b/sci-biology/argo-bin/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/argo-bin/metadata.xml
+++ b/sci-biology/argo-bin/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/argo/metadata.xml b/sci-biology/argo/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/argo/metadata.xml
+++ b/sci-biology/argo/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/artemis/metadata.xml b/sci-biology/artemis/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/artemis/metadata.xml
+++ b/sci-biology/artemis/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/assembly-stats/metadata.xml b/sci-biology/assembly-stats/metadata.xml
index e528fb05f..33f80074b 100644
--- a/sci-biology/assembly-stats/metadata.xml
+++ b/sci-biology/assembly-stats/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">martinghunt/assembly-stats</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">martinghunt/assembly-stats</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/atsas/metadata.xml b/sci-biology/atsas/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/atsas/metadata.xml
+++ b/sci-biology/atsas/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/augustus/metadata.xml b/sci-biology/augustus/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/augustus/metadata.xml
+++ b/sci-biology/augustus/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/bam-readcount/metadata.xml b/sci-biology/bam-readcount/metadata.xml
index 2f50f6cb0..4a0f6e04b 100644
--- a/sci-biology/bam-readcount/metadata.xml
+++ b/sci-biology/bam-readcount/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">genome/bam-readcount</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">genome/bam-readcount</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/bambino/metadata.xml b/sci-biology/bambino/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/bambino/metadata.xml
+++ b/sci-biology/bambino/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/bambus/metadata.xml b/sci-biology/bambus/metadata.xml
index 1054fc1ed..6f58cca41 100644
--- a/sci-biology/bambus/metadata.xml
+++ b/sci-biology/bambus/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/barnacle/metadata.xml b/sci-biology/barnacle/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/barnacle/metadata.xml
+++ b/sci-biology/barnacle/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/barrnap/metadata.xml b/sci-biology/barrnap/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/barrnap/metadata.xml
+++ b/sci-biology/barrnap/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/beagle/metadata.xml b/sci-biology/beagle/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/beagle/metadata.xml
+++ b/sci-biology/beagle/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/beaglecall/metadata.xml b/sci-biology/beaglecall/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/beaglecall/metadata.xml
+++ b/sci-biology/beaglecall/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/bedops/metadata.xml b/sci-biology/bedops/metadata.xml
index 275007996..5398e25bb 100644
--- a/sci-biology/bedops/metadata.xml
+++ b/sci-biology/bedops/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">bedops/bedops</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">bedops/bedops</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/bfast/metadata.xml b/sci-biology/bfast/metadata.xml
index 45f337087..b60dfbcbc 100644
--- a/sci-biology/bfast/metadata.xml
+++ b/sci-biology/bfast/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">bfast</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">bfast</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/bio-cd-hit-report/metadata.xml b/sci-biology/bio-cd-hit-report/metadata.xml
index ed211409a..becca79c5 100644
--- a/sci-biology/bio-cd-hit-report/metadata.xml
+++ b/sci-biology/bio-cd-hit-report/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="rubygems">bio-cd-hit-report</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="rubygems">bio-cd-hit-report</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/biobambam/metadata.xml b/sci-biology/biobambam/metadata.xml
index 38f3b45cf..25aa7fc17 100644
--- a/sci-biology/biobambam/metadata.xml
+++ b/sci-biology/biobambam/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription lang="en">
This package contains some tools for processing BAM files including
bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name
@@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This
bamsort: reads BAM and writes BAM resorted by coordinates or query name
bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name
</longdescription>
- <upstream>
- <remote-id type="github">gt1/biobambam</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">gt1/biobambam</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/biobambam2/metadata.xml b/sci-biology/biobambam2/metadata.xml
index cb036d969..88dabed5a 100644
--- a/sci-biology/biobambam2/metadata.xml
+++ b/sci-biology/biobambam2/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription lang="en">
This package contains some tools for processing BAM files including
bamcollate2: reads BAM and writes BAM reordered such that alignment or collated by query name
@@ -15,7 +15,7 @@ bamrecompress: reads BAM and writes BAM with a defined compression setting. This
bamsort: reads BAM and writes BAM resorted by coordinates or query name
bamtofastq: reads BAM and writes FastQ; output can be collated or uncollated by query name
</longdescription>
- <upstream>
- <remote-id type="github">gt1/biobambam2</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">gt1/biobambam2</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/biopieces/metadata.xml b/sci-biology/biopieces/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/biopieces/metadata.xml
+++ b/sci-biology/biopieces/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/bismark/metadata.xml b/sci-biology/bismark/metadata.xml
index 00744d612..7fbe43fac 100644
--- a/sci-biology/bismark/metadata.xml
+++ b/sci-biology/bismark/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>yanlinlin82@gmail.com</email>
- <name>Linlin Yan</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>yanlinlin82@gmail.com</email>
+ <name>Linlin Yan</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription lang="en">
Bismark is a program to map bisulfite treated sequencing reads to a genome of
interest and perform methylation calls in a single step. The output can be
easily imported into a genome viewer, such as SeqMonk, and enables a researcher
diff --git a/sci-biology/blasr/metadata.xml b/sci-biology/blasr/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/blasr/metadata.xml
+++ b/sci-biology/blasr/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/blat/metadata.xml
+++ b/sci-biology/blat/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/blue/metadata.xml b/sci-biology/blue/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/blue/metadata.xml
+++ b/sci-biology/blue/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/brat/metadata.xml b/sci-biology/brat/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/brat/metadata.xml
+++ b/sci-biology/brat/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/brat_bw/metadata.xml b/sci-biology/brat_bw/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/brat_bw/metadata.xml
+++ b/sci-biology/brat_bw/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/brat_nova/metadata.xml b/sci-biology/brat_nova/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/brat_nova/metadata.xml
+++ b/sci-biology/brat_nova/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/bru2nii/metadata.xml b/sci-biology/bru2nii/metadata.xml
index 90ef9367d..65fc7e751 100644
--- a/sci-biology/bru2nii/metadata.xml
+++ b/sci-biology/bru2nii/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
This is a simple tool for converting Bruker ParaVision MRI data to
the NIfTI file format. It includes both a drag-and-drop graphical
interface (Bru2Nii) as well as a command line tool (Bru2).
</longdescription>
- <upstream>
- <remote-id type="github">neurolabusc/Bru2Nii</remote-id>
- </upstream>
- <use>
- <flag name="gui">Build graphical user interface</flag>
- </use>
+ <upstream>
+ <remote-id type="github">neurolabusc/Bru2Nii</remote-id>
+ </upstream>
+ <use>
+ <flag name="gui">Build graphical user interface</flag>
+ </use>
</pkgmetadata>
diff --git a/sci-biology/bx-python/metadata.xml b/sci-biology/bx-python/metadata.xml
index 8cdea5d5a..3e13342e3 100644
--- a/sci-biology/bx-python/metadata.xml
+++ b/sci-biology/bx-python/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mschu.dev@gmail.com</email>
- <name>Michael Schubert</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="bitbucket">james_taylor/bx-python</remote-id>
- <remote-id type="pypi">bx-python</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="bitbucket">james_taylor/bx-python</remote-id>
+ <remote-id type="pypi">bx-python</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/caftools/metadata.xml b/sci-biology/caftools/metadata.xml
index 81b61ad3b..ebb2f204c 100644
--- a/sci-biology/caftools/metadata.xml
+++ b/sci-biology/caftools/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
CAF is a text format for describing sequence assemblies. It is acedb-compliant
and is an extension of the ace-file format used earlier, but with support for
base quality measures and a more extensive description of the Sequence data.
diff --git a/sci-biology/cast-bin/metadata.xml b/sci-biology/cast-bin/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/cast-bin/metadata.xml
+++ b/sci-biology/cast-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cd-hit-auxtools/metadata.xml b/sci-biology/cd-hit-auxtools/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/cd-hit-auxtools/metadata.xml
+++ b/sci-biology/cd-hit-auxtools/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml
index 7f866330d..95aec8089 100644
--- a/sci-biology/cd-hit/metadata.xml
+++ b/sci-biology/cd-hit/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="project">
diff --git a/sci-biology/cdbfasta/metadata.xml b/sci-biology/cdbfasta/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/cdbfasta/metadata.xml
+++ b/sci-biology/cdbfasta/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/cegma/metadata.xml b/sci-biology/cegma/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/cegma/metadata.xml
+++ b/sci-biology/cegma/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cg-cat/metadata.xml b/sci-biology/cg-cat/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/cg-cat/metadata.xml
+++ b/sci-biology/cg-cat/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cgview-bin/metadata.xml b/sci-biology/cgview-bin/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/cgview-bin/metadata.xml
+++ b/sci-biology/cgview-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/clover/metadata.xml b/sci-biology/clover/metadata.xml
index cc4673633..770d40f6d 100644
--- a/sci-biology/clover/metadata.xml
+++ b/sci-biology/clover/metadata.xml
@@ -1,11 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>maintainer-wanted@gentoo.org</email>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>maintainer-wanted@gentoo.org</email>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cluster/metadata.xml b/sci-biology/cluster/metadata.xml
index 2c86135a2..dbca977f9 100644
--- a/sci-biology/cluster/metadata.xml
+++ b/sci-biology/cluster/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>je_fro@gentoo.org</email>
- <name>Jeff Gardner</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>je_fro@gentoo.org</email>
+ <name>Jeff Gardner</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription lang="en">
Cluster provides an interface to access methods of gene expression data
analysis.
</longdescription>
diff --git a/sci-biology/clview/metadata.xml b/sci-biology/clview/metadata.xml
index 31020917d..7adf609cd 100644
--- a/sci-biology/clview/metadata.xml
+++ b/sci-biology/clview/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/cnrun/metadata.xml b/sci-biology/cnrun/metadata.xml
index 1b2b557a9..7e97ca658 100644
--- a/sci-biology/cnrun/metadata.xml
+++ b/sci-biology/cnrun/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>johnhommer@gmail.com</email>
- <name>Andrei Zavada</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <longdescription>
+ <maintainer type="person">
+ <email>johnhommer@gmail.com</email>
+ <name>Andrei Zavada</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <longdescription>
CNrun is a neuronal network simulator, with these features:
* a conductance- and rate-based Hodgkin-Huxley neurons, a Rall and
diff --git a/sci-biology/codonw/metadata.xml b/sci-biology/codonw/metadata.xml
index fcb129873..7cadd7d4c 100644
--- a/sci-biology/codonw/metadata.xml
+++ b/sci-biology/codonw/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">codonw</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">codonw</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/conform-gt/metadata.xml b/sci-biology/conform-gt/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/conform-gt/metadata.xml
+++ b/sci-biology/conform-gt/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/conifer/metadata.xml b/sci-biology/conifer/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/conifer/metadata.xml
+++ b/sci-biology/conifer/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/conrad/metadata.xml b/sci-biology/conrad/metadata.xml
index 8d38b0b1a..814dcabcc 100644
--- a/sci-biology/conrad/metadata.xml
+++ b/sci-biology/conrad/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">conradcrf</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">conradcrf</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/consed2gap/metadata.xml b/sci-biology/consed2gap/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/consed2gap/metadata.xml
+++ b/sci-biology/consed2gap/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/coral/metadata.xml b/sci-biology/coral/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/coral/metadata.xml
+++ b/sci-biology/coral/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/cortex_var/metadata.xml b/sci-biology/cortex_var/metadata.xml
index aeef1bbec..a2867d6fd 100644
--- a/sci-biology/cortex_var/metadata.xml
+++ b/sci-biology/cortex_var/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">cortexassembler</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">cortexassembler</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/cramtools/metadata.xml b/sci-biology/cramtools/metadata.xml
index 0a1821f4a..5a55ad312 100644
--- a/sci-biology/cramtools/metadata.xml
+++ b/sci-biology/cramtools/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">enasequence/cramtools</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">enasequence/cramtools</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/cross_genome/metadata.xml b/sci-biology/cross_genome/metadata.xml
index 18786886b..28cd3af39 100644
--- a/sci-biology/cross_genome/metadata.xml
+++ b/sci-biology/cross_genome/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">phusion2</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">phusion2</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/cutadapt/metadata.xml b/sci-biology/cutadapt/metadata.xml
index b6f11bf51..6099a3fab 100644
--- a/sci-biology/cutadapt/metadata.xml
+++ b/sci-biology/cutadapt/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">marcelm/cutadapt</remote-id>
- <remote-id type="pypi">cutadapt</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">marcelm/cutadapt</remote-id>
+ <remote-id type="pypi">cutadapt</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/dawg/metadata.xml b/sci-biology/dawg/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/dawg/metadata.xml
+++ b/sci-biology/dawg/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/dcmstack/metadata.xml b/sci-biology/dcmstack/metadata.xml
index 8425c0d53..ae9640ffb 100644
--- a/sci-biology/dcmstack/metadata.xml
+++ b/sci-biology/dcmstack/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/deeptools/metadata.xml b/sci-biology/deeptools/metadata.xml
index ae7de7d62..a11dba65f 100644
--- a/sci-biology/deeptools/metadata.xml
+++ b/sci-biology/deeptools/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">fidelram/deepTools</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">fidelram/deepTools</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/dipy/metadata.xml b/sci-biology/dipy/metadata.xml
index 23f050681..de88739b5 100644
--- a/sci-biology/dipy/metadata.xml
+++ b/sci-biology/dipy/metadata.xml
@@ -1,21 +1,21 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>horea.christ@gmail.com</email>
- <name>Horea Christian</name>
- </maintainer>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <longdescription lang="en">
+ <maintainer type="person">
+ <email>horea.christ@gmail.com</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on
diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for
denoising, registration, reconstruction, tracking, clustering, visualization, and statistical
analysis of MRI data.
</longdescription>
- <upstream>
- <remote-id type="github">nipy/dipy</remote-id>
- </upstream>
+ <upstream>
+ <remote-id type="github">nipy/dipy</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/discrover/metadata.xml b/sci-biology/discrover/metadata.xml
index 1055813e9..90c7c21bc 100644
--- a/sci-biology/discrover/metadata.xml
+++ b/sci-biology/discrover/metadata.xml
@@ -1,28 +1,28 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>jonas@maaskola.de</email>
- <name>Jonas Maaskola</name>
- </maintainer>
- <use>
- <flag name="cairo">
+ <maintainer type="person">
+ <email>jonas@maaskola.de</email>
+ <name>Jonas Maaskola</name>
+ </maintainer>
+ <use>
+ <flag name="cairo">
Use Cairo for sequence logo plotting capabilities
</flag>
- <flag name="dreme">
+ <flag name="dreme">
Enable usage of DREME from the MEME package for seeding
</flag>
- <flag name="lto">
+ <flag name="lto">
Compile with link-time optimization (LTO)
</flag>
- <flag name="misc_scripts">
+ <flag name="misc_scripts">
Install miscellaneous scripts
</flag>
- <flag name="rmathlib">
+ <flag name="rmathlib">
Link to the standalone Rmathlib for statistical routines
</flag>
- </use>
- <upstream>
- <remote-id type="github">maaskola/discrover</remote-id>
- </upstream>
+ </use>
+ <upstream>
+ <remote-id type="github">maaskola/discrover</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/dna2pep/metadata.xml b/sci-biology/dna2pep/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/dna2pep/metadata.xml
+++ b/sci-biology/dna2pep/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/ePCR/metadata.xml b/sci-biology/ePCR/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/ePCR/metadata.xml
+++ b/sci-biology/ePCR/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/edena/metadata.xml b/sci-biology/edena/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/edena/metadata.xml
+++ b/sci-biology/edena/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/ensembl-tools/metadata.xml b/sci-biology/ensembl-tools/metadata.xml
index 2457da65b..7cd2955fb 100644
--- a/sci-biology/ensembl-tools/metadata.xml
+++ b/sci-biology/ensembl-tools/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">Ensembl/ensembl-tools</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">Ensembl/ensembl-tools</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/epga/metadata.xml b/sci-biology/epga/metadata.xml
index 615525179..c0597b729 100644
--- a/sci-biology/epga/metadata.xml
+++ b/sci-biology/epga/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">bioinfomaticsCSU/EPGA</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/erpin/metadata.xml b/sci-biology/erpin/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/erpin/metadata.xml
+++ b/sci-biology/erpin/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/est2assembly/metadata.xml b/sci-biology/est2assembly/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/est2assembly/metadata.xml
+++ b/sci-biology/est2assembly/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/estscan/metadata.xml b/sci-biology/estscan/metadata.xml
index 138f8c095..c79c2d1b5 100644
--- a/sci-biology/estscan/metadata.xml
+++ b/sci-biology/estscan/metadata.xml
@@ -1,19 +1,19 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <use>
- <flag name="icc">Undocumented USE</flag>
- <flag name="ifc">Undocumented USE</flag>
- </use>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <use>
+ <flag name="icc">Undocumented USE</flag>
+ <flag name="ifc">Undocumented USE</flag>
+ </use>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/eugene/metadata.xml
+++ b/sci-biology/eugene/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/eval/metadata.xml b/sci-biology/eval/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/eval/metadata.xml
+++ b/sci-biology/eval/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/exomiser-bin/metadata.xml b/sci-biology/exomiser-bin/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/exomiser-bin/metadata.xml
+++ b/sci-biology/exomiser-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/exonerate-gff3/metadata.xml b/sci-biology/exonerate-gff3/metadata.xml
index 378558dab..34cada23a 100644
--- a/sci-biology/exonerate-gff3/metadata.xml
+++ b/sci-biology/exonerate-gff3/metadata.xml
@@ -1,18 +1,18 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <use>
- <flag name="utils">Unknown</flag>
- </use>
- <upstream>
- <remote-id type="github">hotdogee/exonerate-gff3</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <use>
+ <flag name="utils">Unknown</flag>
+ </use>
+ <upstream>
+ <remote-id type="github">hotdogee/exonerate-gff3</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/fastdnaml/metadata.xml b/sci-biology/fastdnaml/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/fastdnaml/metadata.xml
+++ b/sci-biology/fastdnaml/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/fastqc/metadata.xml b/sci-biology/fastqc/metadata.xml
index 1d67411d5..138cb7705 100644
--- a/sci-biology/fastqc/metadata.xml
+++ b/sci-biology/fastqc/metadata.xml
@@ -5,7 +5,7 @@
<email>mmokrejs@fold.natur.cuni.cz</email>
<name>Martin Mokrejs</name>
</maintainer>
-<maintainer type="project">
+ <maintainer type="project">
<email>sci-biology@gentoo.org</email>
<name>Gentoo Biology Project</name>
</maintainer>
diff --git a/sci-biology/fastx_toolkit/metadata.xml b/sci-biology/fastx_toolkit/metadata.xml
index 4db9d1693..880cea016 100644
--- a/sci-biology/fastx_toolkit/metadata.xml
+++ b/sci-biology/fastx_toolkit/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">agordon/fastx_toolkit</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">agordon/fastx_toolkit</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/ffindex/metadata.xml b/sci-biology/ffindex/metadata.xml
index 18e09466d..138cb7705 100644
--- a/sci-biology/ffindex/metadata.xml
+++ b/sci-biology/ffindex/metadata.xml
@@ -1,12 +1,12 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/fgap-bin/metadata.xml b/sci-biology/fgap-bin/metadata.xml
index 59e8a4413..b53e13d28 100644
--- a/sci-biology/fgap-bin/metadata.xml
+++ b/sci-biology/fgap-bin/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">fgap</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">fgap</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/fgap/metadata.xml b/sci-biology/fgap/metadata.xml
index 59e8a4413..b53e13d28 100644
--- a/sci-biology/fgap/metadata.xml
+++ b/sci-biology/fgap/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">fgap</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">fgap</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/flexbar/metadata.xml b/sci-biology/flexbar/metadata.xml
index adfdd237a..e449a61d2 100644
--- a/sci-biology/flexbar/metadata.xml
+++ b/sci-biology/flexbar/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/freebayes/metadata.xml b/sci-biology/freebayes/metadata.xml
index fdd189bd5..493885416 100644
--- a/sci-biology/freebayes/metadata.xml
+++ b/sci-biology/freebayes/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">ekg/freebayes</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">ekg/freebayes</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/fsa/metadata.xml b/sci-biology/fsa/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/fsa/metadata.xml
+++ b/sci-biology/fsa/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/full_lengther_next/metadata.xml b/sci-biology/full_lengther_next/metadata.xml
index 18e09466d..138cb7705 100644
--- a/sci-biology/full_lengther_next/metadata.xml
+++ b/sci-biology/full_lengther_next/metadata.xml
@@ -1,12 +1,12 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/gap2caf/metadata.xml b/sci-biology/gap2caf/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/gap2caf/metadata.xml
+++ b/sci-biology/gap2caf/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/gatk/metadata.xml b/sci-biology/gatk/metadata.xml
index baaa7e21c..5a54c7fec 100644
--- a/sci-biology/gatk/metadata.xml
+++ b/sci-biology/gatk/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">broadgsa/gatk</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">broadgsa/gatk</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/gemini/metadata.xml b/sci-biology/gemini/metadata.xml
index 745bce5e5..260a8b4ae 100644
--- a/sci-biology/gemini/metadata.xml
+++ b/sci-biology/gemini/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">arq5x/gemini</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">arq5x/gemini</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/geneid/metadata.xml b/sci-biology/geneid/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/geneid/metadata.xml
+++ b/sci-biology/geneid/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/genepop/metadata.xml b/sci-biology/genepop/metadata.xml
index 004c99555..8417d1580 100644
--- a/sci-biology/genepop/metadata.xml
+++ b/sci-biology/genepop/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- </pkgmetadata>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+</pkgmetadata>
diff --git a/sci-biology/generecon/metadata.xml b/sci-biology/generecon/metadata.xml
index ba3b7651b..de97c87f7 100644
--- a/sci-biology/generecon/metadata.xml
+++ b/sci-biology/generecon/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>lucas.chiesa@gmail.com</email>
- <name>Lucas Chiesa</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>lucas.chiesa@gmail.com</email>
+ <name>Lucas Chiesa</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/genometools/metadata.xml b/sci-biology/genometools/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/genometools/metadata.xml
+++ b/sci-biology/genometools/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/genomeview-bin/metadata.xml b/sci-biology/genomeview-bin/metadata.xml
index 6646b4398..0f267b755 100644
--- a/sci-biology/genomeview-bin/metadata.xml
+++ b/sci-biology/genomeview-bin/metadata.xml
@@ -1,4 +1,4 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
<maintainer type="person">
diff --git a/sci-biology/germline/metadata.xml b/sci-biology/germline/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/germline/metadata.xml
+++ b/sci-biology/germline/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/gfftools/metadata.xml b/sci-biology/gfftools/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/gfftools/metadata.xml
+++ b/sci-biology/gfftools/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/gffutils/metadata.xml b/sci-biology/gffutils/metadata.xml
index 154685621..c9fe23ced 100644
--- a/sci-biology/gffutils/metadata.xml
+++ b/sci-biology/gffutils/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mschu.dev@gmail.com</email>
- <name>Michael Schubert</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">daler/gffutils</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mschu.dev@gmail.com</email>
+ <name>Michael Schubert</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">daler/gffutils</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/glean/metadata.xml b/sci-biology/glean/metadata.xml
index d0f646374..0f267b755 100644
--- a/sci-biology/glean/metadata.xml
+++ b/sci-biology/glean/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">downloads</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/gmap/metadata.xml b/sci-biology/gmap/metadata.xml
index 959160fe4..8417d1580 100644
--- a/sci-biology/gmap/metadata.xml
+++ b/sci-biology/gmap/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/grabix/metadata.xml b/sci-biology/grabix/metadata.xml
index 5ad9ab32c..eeafbb654 100644
--- a/sci-biology/grabix/metadata.xml
+++ b/sci-biology/grabix/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">arq5x/grabix</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">arq5x/grabix</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/graf-bin/metadata.xml b/sci-biology/graf-bin/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/graf-bin/metadata.xml
+++ b/sci-biology/graf-bin/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/grass/metadata.xml b/sci-biology/grass/metadata.xml
index 8563b702d..b4153fae5 100644
--- a/sci-biology/grass/metadata.xml
+++ b/sci-biology/grass/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">AlexeyG/GRASS</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">AlexeyG/GRASS</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/hexamer/metadata.xml b/sci-biology/hexamer/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/hexamer/metadata.xml
+++ b/sci-biology/hexamer/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/hisat2/metadata.xml b/sci-biology/hisat2/metadata.xml
index b28711aa3..2a70cba7e 100644
--- a/sci-biology/hisat2/metadata.xml
+++ b/sci-biology/hisat2/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">infphilo/hisat2</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">infphilo/hisat2</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/hts-python/metadata.xml b/sci-biology/hts-python/metadata.xml
index 39221baa1..ac270e09b 100644
--- a/sci-biology/hts-python/metadata.xml
+++ b/sci-biology/hts-python/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">brentp/hts-python</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">brentp/hts-python</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/hydra-sv/metadata.xml b/sci-biology/hydra-sv/metadata.xml
index 8425c0d53..ae9640ffb 100644
--- a/sci-biology/hydra-sv/metadata.xml
+++ b/sci-biology/hydra-sv/metadata.xml
@@ -1,8 +1,8 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci@gentoo.org</email>
- <name>Gentoo Science Project</name>
- </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/idba/metadata.xml b/sci-biology/idba/metadata.xml
index f68a1b6fa..138cb7705 100644
--- a/sci-biology/idba/metadata.xml
+++ b/sci-biology/idba/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/igv/metadata.xml b/sci-biology/igv/metadata.xml
index 94761dc0e..8b6e6434a 100644
--- a/sci-biology/igv/metadata.xml
+++ b/sci-biology/igv/metadata.xml
@@ -1,11 +1,11 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">broadinstitute/IGV</remote-id>
- </upstream>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">broadinstitute/IGV</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/imagej/metadata.xml b/sci-biology/imagej/metadata.xml
index 4f14b2e58..ca2867d8c 100644
--- a/sci-biology/imagej/metadata.xml
+++ b/sci-biology/imagej/metadata.xml
@@ -1,15 +1,15 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <use>
- <flag name="plugins">Install additional plugins</flag>
- </use>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <use>
+ <flag name="plugins">Install additional plugins</flag>
+ </use>
</pkgmetadata>
diff --git a/sci-biology/jannovar-bin/metadata.xml b/sci-biology/jannovar-bin/metadata.xml
index faceb6e46..5e4e28811 100644
--- a/sci-biology/jannovar-bin/metadata.xml
+++ b/sci-biology/jannovar-bin/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">charite/jannovar</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">charite/jannovar</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/jannovar/metadata.xml b/sci-biology/jannovar/metadata.xml
index faceb6e46..5e4e28811 100644
--- a/sci-biology/jannovar/metadata.xml
+++ b/sci-biology/jannovar/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">charite/jannovar</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="github">charite/jannovar</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/jellyfish/metadata.xml b/sci-biology/jellyfish/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/jellyfish/metadata.xml
+++ b/sci-biology/jellyfish/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/jigsaw/metadata.xml b/sci-biology/jigsaw/metadata.xml
index 1699e58b2..138cb7705 100644
--- a/sci-biology/jigsaw/metadata.xml
+++ b/sci-biology/jigsaw/metadata.xml
@@ -1,12 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
-<maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
</pkgmetadata>
diff --git a/sci-biology/jtreeview-bin/metadata.xml b/sci-biology/jtreeview-bin/metadata.xml
index 40552f721..ce99cfe6c 100644
--- a/sci-biology/jtreeview-bin/metadata.xml
+++ b/sci-biology/jtreeview-bin/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">jtreeview</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="sourceforge">jtreeview</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/jtreeview/metadata.xml b/sci-biology/jtreeview/metadata.xml
index 8dddf1715..5139daeeb 100644
--- a/sci-biology/jtreeview/metadata.xml
+++ b/sci-biology/jtreeview/metadata.xml
@@ -1,16 +1,16 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="bitbucket">TreeView3Dev/treeview3</remote-id>
- <remote-id type="sourceforge">jtreeview</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>
+ <name>Martin Mokrejs</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci-biology@gentoo.org</email>
+ <name>Gentoo Biology Project</name>
+ </maintainer>
+ <upstream>
+ <remote-id type="bitbucket">TreeView3Dev/treeview3</remote-id>
+ <remote-id type="sourceforge">jtreeview</remote-id>
+ </upstream>
</pkgmetadata>
diff --git a/sci-biology/karect/metadata.xml b/sci-biology/karect/metadata.xml
index 0ac12d618..de13610d5 100644
--- a/sci-biology/karect/metadata.xml
+++ b/sci-biology/karect/metadata.xml
@@ -1,15 +1,15 @@
-<?xml version='1.0' encoding='UTF-8'?>
+<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">aminallam/karect</remote-id>
- </upstream>
+ <maintainer type="person">
+ <email>mmokrejs@fold.natur.cuni.cz</email>