From 1afc16b8f25a66799bd25e2b2cfa9962d6715900 Mon Sep 17 00:00:00 2001
From: Horea Christian <horea.christ@yandex.com>
Date: Sat, 25 Jun 2016 14:21:30 +0200
Subject: sci-biology/dipy: nre package

Package-Manager: portage-2.3.0_rc1
---
 sci-biology/dipy/dipy-9999.ebuild | 34 ++++++++++++++++++++++++++++++++++
 sci-biology/dipy/metadata.xml     | 21 +++++++++++++++++++++
 2 files changed, 55 insertions(+)
 create mode 100644 sci-biology/dipy/dipy-9999.ebuild
 create mode 100644 sci-biology/dipy/metadata.xml

diff --git a/sci-biology/dipy/dipy-9999.ebuild b/sci-biology/dipy/dipy-9999.ebuild
new file mode 100644
index 000000000..a3852cc1c
--- /dev/null
+++ b/sci-biology/dipy/dipy-9999.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 python3_4 )
+
+inherit distutils-r1 git-r3
+
+DESCRIPTION="computational neuroanatomy project focusing on diffusion MRI"
+HOMEPAGE="http://nipy.org/dipy"
+SRC_URI=""
+EGIT_REPO_URI="git://github.com/nipy/dipy"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS=""
+IUSE="test"
+
+DEPEND="
+	test? ( dev-python/nose[${PYTHON_USEDEP}] )
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	"
+RDEPEND="
+	dev-python/cython
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	sci-libs/nibabel[${PYTHON_USEDEP}]
+	"
+
+src_test() {
+	emake test-code
+}
diff --git a/sci-biology/dipy/metadata.xml b/sci-biology/dipy/metadata.xml
new file mode 100644
index 000000000..80c312a7f
--- /dev/null
+++ b/sci-biology/dipy/metadata.xml
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <maintainer type="person">
+    <email>h.chr@mail.ru</email>
+    <name>Horea Christian</name>
+  </maintainer>
+  <maintainer type="project">
+    <email>sci@gentoo.org</email>
+    <name>Gentoo Science Project</name>
+  </maintainer>
+  <longdescription lang="en">
+    Dipy is a free and open source software project for computational neuroanatomy, focusing mainly on 
+    diffusion magnetic resonance imaging (dMRI) analysis. It implements a broad range of algorithms for 
+    denoising, registration, reconstruction, tracking, clustering, visualization, and statistical 
+    analysis of MRI data.
+  </longdescription>
+  <upstream>
+    <remote-id type="github">nipy/dipy</remote-id>
+  </upstream>
+</pkgmetadata>
-- 
cgit v1.2.3-65-gdbad


From fb40d97766959cab126905bdade24c33d2dc2c72 Mon Sep 17 00:00:00 2001
From: Horea Christian <horea.christ@yandex.com>
Date: Mon, 27 Jun 2016 00:21:03 +0200
Subject: sci-biology/dipy: implemented tests

Package-Manager: portage-2.3.0_rc1
---
 sci-biology/dipy/Manifest           |  1 +
 sci-biology/dipy/dipy-0.11.0.ebuild | 36 ++++++++++++++++++++++++++++++++++++
 sci-biology/dipy/dipy-9999.ebuild   | 21 ++++++++++++---------
 3 files changed, 49 insertions(+), 9 deletions(-)
 create mode 100644 sci-biology/dipy/Manifest
 create mode 100644 sci-biology/dipy/dipy-0.11.0.ebuild

diff --git a/sci-biology/dipy/Manifest b/sci-biology/dipy/Manifest
new file mode 100644
index 000000000..1c13b2538
--- /dev/null
+++ b/sci-biology/dipy/Manifest
@@ -0,0 +1 @@
+DIST dipy-0.11.0.tar.gz 4943339 SHA256 b9b7c19ccf9d5087f2bdea86478319a5355bb4d4c5cb23afd7d85b09048d1716 SHA512 012c043f6c555d7abf0e67598a129b9538af6e9c3b613356ed7e015d866e85a165f8d1d3f79efa2f79bc0e101a908c42778bbdec0244f1fa122e1ff828f93cda WHIRLPOOL 9b5a24355fd8eccd168c7583dab725cc2d4a398f15f1fc1b3b7609f253d461286bf41f2e80d2c2adc85f20659169307e3523c4c2c4ceab94c94e7096bec7d358
diff --git a/sci-biology/dipy/dipy-0.11.0.ebuild b/sci-biology/dipy/dipy-0.11.0.ebuild
new file mode 100644
index 000000000..9c97079ce
--- /dev/null
+++ b/sci-biology/dipy/dipy-0.11.0.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=6
+
+PYTHON_COMPAT=( python2_7 python3_4 )
+
+inherit distutils-r1
+
+DESCRIPTION="computational neuroanatomy project focusing on diffusion MRI"
+HOMEPAGE="http://nipy.org/dipy"
+SRC_URI="https://github.com/nipy/dipy/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+
+DEPEND="
+	test? ( dev-python/nose[${PYTHON_USEDEP}] )
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	dev-python/cython[${PYTHON_USEDEP}]
+	"
+RDEPEND="
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	sci-libs/nibabel[${PYTHON_USEDEP}]
+	"
+
+python_test() {
+	distutils_install_for_testing
+	cd "${TEST_DIR}"/lib || die
+	nosetests || die
+}
+
diff --git a/sci-biology/dipy/dipy-9999.ebuild b/sci-biology/dipy/dipy-9999.ebuild
index a3852cc1c..beb75e456 100644
--- a/sci-biology/dipy/dipy-9999.ebuild
+++ b/sci-biology/dipy/dipy-9999.ebuild
@@ -19,16 +19,19 @@ KEYWORDS=""
 IUSE="test"
 
 DEPEND="
-	test? ( dev-python/nose[${PYTHON_USEDEP}] )
-	dev-python/setuptools[${PYTHON_USEDEP}]
-	"
+        test? ( dev-python/nose[${PYTHON_USEDEP}] )
+        dev-python/setuptools[${PYTHON_USEDEP}]
+        dev-python/cython[${PYTHON_USEDEP}]
+        "
 RDEPEND="
-	dev-python/cython
 	dev-python/numpy[${PYTHON_USEDEP}]
-	sci-libs/scipy[${PYTHON_USEDEP}]
-	sci-libs/nibabel[${PYTHON_USEDEP}]
-	"
+        sci-libs/scipy[${PYTHON_USEDEP}]
+        sci-libs/nibabel[${PYTHON_USEDEP}]
+        "
 
-src_test() {
-	emake test-code
+python_test() {
+        distutils_install_for_testing
+        cd "${TEST_DIR}"/lib || die
+        nosetests || die
 }
+
-- 
cgit v1.2.3-65-gdbad