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# Copyright 2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=5
inherit autotools-utils eutils versionator
MY_PV=$(replace_all_version_separators '-')
DESCRIPTION="General purpose trace and experiment file reading/writing interface"
HOMEPAGE="https://github.com/jkbonfield/io_lib
http://staden.sourceforge.net/"
SRC_URI="https://github.com/jkbonfield/io_lib/archive/${PN}-${MY_PV}.tar.gz -> ${P}.tar.gz"
LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="+bzip2 curl +libdeflate lzma static-libs"
S="${WORKDIR}"/"${PN}-${PN}-${MY_PV}"
# >>> Working in BUILD_DIR: "/scratch/var/tmp/portage/sci-libs/io_lib-1.14.11/work/io_lib-1.14.11_build"
# /scratch/var/tmp/portage/sci-libs/io_lib-1.14.11/temp/environment: line 530: pushd: /scratch/var/tmp/portage/sci-libs/io_lib-1.14.11/work/io_lib-1.14.11_build: No such file or directory
# * ERROR: sci-libs/io_lib-1.14.11::science failed (install phase):
# * (no error message)
# *
# * Call stack:
# * ebuild.sh, line 124: Called src_install
# * environment, line 2506: Called autotools-utils_src_install
# * environment, line 530: Called die
# * The specific snippet of code:
# * pushd "${BUILD_DIR}" > /dev/null || die;
#
BUILD_DIR="${S}"
# Prototype changes in io_lib-1.9.0 create incompatibilities with BioPerl. (Only
# versions 1.8.11 and 1.8.12 will work with the BioPerl Staden extensions.)
#DEPEND="!sci-biology/bioperl"
DEPEND="
libdeflate? ( app-arch/libdeflate )
lzma? ( app-arch/xz-utils:= app-arch/lzma )
bzip2? ( app-arch/bzip2 )
curl? ( net-misc/curl )
sys-libs/zlib"
RDEPEND="${DEPEND}"
src_prepare(){
# https://github.com/jkbonfield/io_lib/issues/12
eautoreconf
default
}
src_configure(){
# https://github.com/jkbonfield/io_lib/issues/11
# https://github.com/jkbonfield/io_lib/issues/13
local myconf=()
! use static-libs && myconf+=( "--enable-static=no" )
econf ${myconf[@]} $(use_with libdeflate)
}
src_compile(){
# BUG: "have to" provide my own src_compile() because ${P}_build dir is missing now
# alternatively BUILD_DIR="${S}" would probably help here too
emake
}
src_install() {
# cd "${S}" || die # this does not help to get around the ${P}_build missing
# what helped was to set BUILD_DIR="${S}" above
autotools-utils_src_install
dodoc docs/{Hash_File_Format,ZTR_format}
}
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