diff options
| author |   azazello <gentoo@horizon.ath.cx> | 2008-01-18 17:59:19 +0000 |
|---|---|---|
| committer | azazello <gentoo@horizon.ath.cx> | 2008-01-18 17:59:19 +0000 |
| commit | fa6017df31707d1a30eacb3b1d5b7c613686070d (patch) | |
| tree | cc8028afe561ceecbef96638087b18a8e7042179 /sci-biology | |
| parent | Removed parafoam USE flag for sci-libs/openfoam-bin (diff) | |
| download | sunrise-fa6017df31707d1a30eacb3b1d5b7c613686070d.tar.gz sunrise-fa6017df31707d1a30eacb3b1d5b7c613686070d.tar.bz2 sunrise-fa6017df31707d1a30eacb3b1d5b7c613686070d.zip | |
sci-biology/twinscan: New package twinscan, bug 154939
svn path=/sunrise/; revision=5457
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/twinscan/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/twinscan/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/twinscan/metadata.xml | 5 | ||||
| -rw-r--r-- | sci-biology/twinscan/twinscan-4.1.2.ebuild | 30 |
4 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/twinscan/ChangeLog b/sci-biology/twinscan/ChangeLog new file mode 100644 index 000000000..67a7c6c3c --- /dev/null +++ b/sci-biology/twinscan/ChangeLog @@ -0,0 +1,8 @@ +# ChangeLog for sci-biology/twinscan +# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + + 18 Jan 2008; azazello <gentoo@horizon.ath.cx> +metadata.xml, + +twinscan-4.1.2.ebuild: + New package twinscan, bug 154939 + diff --git a/sci-biology/twinscan/Manifest b/sci-biology/twinscan/Manifest new file mode 100644 index 000000000..5fa2df74f --- /dev/null +++ b/sci-biology/twinscan/Manifest @@ -0,0 +1,4 @@ +DIST iscan-4.1.2.tar_.gz 5894833 RMD160 80cd142ae9cbd44c8d582eac5c13113702c77769 SHA1 86a67f78aba51d4deccdf5583936dd8853c615ff SHA256 30c7e980b2ccbba22a5e2d7ff0d7c1aaeb610cc1cec81432bb30e87f03f7e56a +EBUILD twinscan-4.1.2.ebuild 741 RMD160 74fbc29c195afa0641e0266f6f7a2179747c5640 SHA1 c92a1962663b267b811d1ae96c5fc8f85b731722 SHA256 a3917c987efbf643b87adfa909e96b82c8de49680f507db1d6e3f81aec3931e1 +MISC ChangeLog 246 RMD160 dc8514be54fd4b4e8dd37118dca71190cebff71f SHA1 7f40078e1449d0d7aa17aac1f21d9924c872c52d SHA256 3496a3947a48a6109ea9d87e372a09e665b0c163a678825c38a53ed83cc3afd9 +MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 diff --git a/sci-biology/twinscan/metadata.xml b/sci-biology/twinscan/metadata.xml new file mode 100644 index 000000000..7e3286984 --- /dev/null +++ b/sci-biology/twinscan/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>maintainer-wanted</herd> +</pkgmetadata> diff --git a/sci-biology/twinscan/twinscan-4.1.2.ebuild b/sci-biology/twinscan/twinscan-4.1.2.ebuild new file mode 100644 index 000000000..4d48fe293 --- /dev/null +++ b/sci-biology/twinscan/twinscan-4.1.2.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +DESCRIPTION="A gene structure prediction pipeline" +LICENSE="as-is" +HOMEPAGE="http://mblab.wustl.edu/software/twinscan" +SLOT="0" +IUSE="" +KEYWORDS="~x86" +SRC_URI="http://mblab.wustl.edu/software/download/iscan-${PV}.tar_.gz" + +S="${WORKDIR}/N-SCAN" + +RDEPEND="sci-biology/repeatmasker" + +src_unpack() { + unpack ${A} + tar -C "${WORKDIR}" -xf iscan-${PV}.tar_ + sed -i "s|\(use strict;\)|\1\nuse lib \"/usr/share/${PN}/lib/perl5\";|" "${S}"/bin/*.pl || die +} + +src_install() { + dobin "${S}/bin/iscan" + dobin "${S}/bin/"*".pl" + insinto /usr/share/${PN} + doins -r "${S}/parameters" + doins -r "${S}/lib" + dodoc examples/* README* +} |