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| author |   Pacho Ramos <pacho@gentoo.org> | 2020-06-13 19:41:10 +0200 |
|---|---|---|
| committer | Pacho Ramos <pacho@gentoo.org> | 2020-06-13 19:41:48 +0200 |
| commit | 4b72e59ed9b1fcdb1ab88ede59c9a863549c5295 (patch) | |
| tree | 8fb7c03aea6f7951bcab5570fb34222cc0213d0c | |
| parent | multilib.eclass: export PKG_CONFIG in multilib_toolchain_setup (diff) | |
| download | gentoo-4b72e59ed9b1fcdb1ab88ede59c9a863549c5295.tar.gz gentoo-4b72e59ed9b1fcdb1ab88ede59c9a863549c5295.tar.bz2 gentoo-4b72e59ed9b1fcdb1ab88ede59c9a863549c5295.zip | |
sci-chemistry/mdtraj: Bump to 1.9.4
Closes: https://bugs.gentoo.org/711696
Closes: https://bugs.gentoo.org/718478
Package-Manager: Portage-2.3.100, Repoman-2.3.22
Signed-off-by: Pacho Ramos <pacho@gentoo.org>
| -rw-r--r-- | sci-chemistry/mdtraj/Manifest | 1 | ||||
| -rw-r--r-- | sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild | 43 |
2 files changed, 44 insertions, 0 deletions
diff --git a/sci-chemistry/mdtraj/Manifest b/sci-chemistry/mdtraj/Manifest index 982cdea3569f..8e63d1026da5 100644 --- a/sci-chemistry/mdtraj/Manifest +++ b/sci-chemistry/mdtraj/Manifest @@ -1 +1,2 @@ DIST mdtraj-1.9.1.tar.gz 1985711 BLAKE2B 625b7c1da998bd46732604dcc93c76f970f3c79f10e81aa9f4b3051ee45101efea8afd803d539ba1831dac3e7ed208d7c3773f74189a3887063cbff2b4d79df6 SHA512 015d9d1e258a7a207ac3b7e7a81b87c308e8684ee0a173ae9b722a90910e95e7f2ee18158c163212fae39d093b0cf397293d6e713538acb1fd20a7b70f2adc76 +DIST mdtraj-1.9.4.tar.gz 2133297 BLAKE2B c1507246bf0c8d7f6753f3d505f940e6f2f001361e42f10c9775647a7e6b58edf2d3953a8e48932f6bf9ad90b27e1baf30df6a7c1a590e49a860175822a25360 SHA512 55f67546db20ce63da3af2231df459e9983e15a65da960784613f746dcce820fe6b0deffbb21b528e93fc6cf674dc7a25ee11110894d2a89e5504e20d200ca38 diff --git a/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild b/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild new file mode 100644 index 000000000000..5537daa6a536 --- /dev/null +++ b/sci-chemistry/mdtraj/mdtraj-1.9.4.ebuild @@ -0,0 +1,43 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 +PYTHON_COMPAT=( python3_{6,7} ) +DISTUTILS_USE_SETUPTOOLS=rdepend + +inherit distutils-r1 + +DESCRIPTION="Read, write and analyze MD trajectories with only a few lines of Python code" +HOMEPAGE="http://mdtraj.org" +SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +RDEPEND=" + dev-python/astor[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/pytables[${PYTHON_USEDEP}] + dev-python/networkx[${PYTHON_USEDEP}] + sci-libs/scipy[${PYTHON_USEDEP}] +" +DEPEND="${RDEPEND} + test? ( + dev-python/jupyter_client[${PYTHON_USEDEP}] + dev-python/nbformat[${PYTHON_USEDEP}] + ) +" + +distutils_enable_tests pytest + +# Tests fail (in previous ebuild versions they weren't even run +RESTRICT="test" + +python_prepare() { + sed -e "s:re.match('build.*(mdtraj.*)', output_dir).group(1):'.':g" \ + -i basesetup.py || die + distutils-r1_python_prepare_all +} |