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authorAndreas Sturmlechner <asturm@gentoo.org>2018-04-05 15:46:51 +0200
committerAndreas Sturmlechner <asturm@gentoo.org>2018-04-06 01:24:56 +0200
commit95a1ccaaaae670544160aaab600509a6ee1a8d93 (patch)
tree8d03786b067d3f18bb4f4573188b655d4c3a0125
parentsci-biology/qrna: DEPEND on sci-biology/hmmer:2 (diff)
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sci-biology/qrna: Drop old
Package-Manager: Portage-2.3.28, Repoman-2.3.9
-rw-r--r--sci-biology/qrna/qrna-2.0.3c-r2.ebuild58
1 files changed, 0 insertions, 58 deletions
diff --git a/sci-biology/qrna/qrna-2.0.3c-r2.ebuild b/sci-biology/qrna/qrna-2.0.3c-r2.ebuild
deleted file mode 100644
index ea79f2d548f..00000000000
--- a/sci-biology/qrna/qrna-2.0.3c-r2.ebuild
+++ /dev/null
@@ -1,58 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit toolchain-funcs
-
-DESCRIPTION="Prototype ncRNA genefinder"
-HOMEPAGE="http://selab.janelia.org/software.html"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-RDEPEND="
- dev-lang/perl
- sci-biology/hmmer"
-DEPEND="${RDEPEND}"
-
-PATCHES=(
- "${FILESDIR}"/${P}-glibc-2.10.patch
- "${FILESDIR}"/${P}-ldflags.patch
-)
-
-src_prepare() {
- default
- sed \
- -e "s:^CC.*:CC = $(tc-getCC):" \
- -e "/^AR/s:ar:$(tc-getAR):g" \
- -e "/^RANLIB/s:ranlib:$(tc-getRANLIB):g" \
- -e "/CFLAGS/s:=.*$:= ${CFLAGS}:" \
- -i {src,squid,squid02}/Makefile || die
- rm -v squid*/*.a || die
-}
-
-src_compile() {
- local d
- for d in squid squid02 src; do
- emake -C ${d}
- done
-}
-
-src_install() {
- dobin src/{cfgbuild,eqrna,eqrna_sample,rnamat_main} scripts/*
-
- newdoc 00README README
- dodoc -r documentation/.
-
- insinto /usr/share/${PN}/data
- doins -r lib/.
- insinto /usr/share/${PN}/demos
- doins -r Demos/.
-
- # Sets the path to the QRNA data files
- doenvd "${FILESDIR}"/26qrna
-}