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authorSergey Torokhov <torokhov-s-a@yandex.ru>2022-05-07 00:36:41 +0300
committerSam James <sam@gentoo.org>2022-05-13 20:03:53 +0000
commit95eccece0ac1413544a5f45bd40b50271d5cb65e (patch)
tree5755a8504c0a7eaafa8dba76638075c0cbb3f7ce
parentnet-libs/nodejs: remove unused patch (diff)
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sci-libs/cantera: 2.6.0 version bump
dev-python/pip is used to install python bindings and dev-python/pytest is used for python tests since this release Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Closes: https://github.com/gentoo/gentoo/pull/25357 Signed-off-by: Sam James <sam@gentoo.org>
-rw-r--r--sci-libs/cantera/Manifest1
-rw-r--r--sci-libs/cantera/cantera-2.6.0.ebuild147
-rw-r--r--sci-libs/cantera/files/cantera-2.6.0_env.patch57
3 files changed, 205 insertions, 0 deletions
diff --git a/sci-libs/cantera/Manifest b/sci-libs/cantera/Manifest
index 67533340104..beccad72939 100644
--- a/sci-libs/cantera/Manifest
+++ b/sci-libs/cantera/Manifest
@@ -1 +1,2 @@
DIST cantera-2.5.1.tar.gz 2492422 BLAKE2B b48c5d12fc2b69d309759afd20b55dc2533c23ccba840109cf7a85c4ebb8306eb48d9f007914184a9d409f7bf296814fe09e6e62a29cf8384edd954fdff2af4e SHA512 8cd65f6b86b3009f22ec243cb7cb833e26919c4925fd15fba8fb98aad2180d8c0fe7550e13efeb7cce55abab06d9400230d59c9c43b4d3be6b0575b1164a56bc
+DIST cantera-2.6.0.tar.gz 2586243 BLAKE2B 3562dc3641c70cdbd5e07062ecee56c0658b098c20bb477c3e741731db01e38fccf624e6769377420b01dd4bac72a0608cf226cce40ac12f13e71081090e06bc SHA512 74e12c89af38236bcc064034f74edcc690895151a9e453e728d130b83f5f527e675750c68a3fe36eea3c6aec6969685aa8828ae740a2e27b5df72a8ccc4d2856
diff --git a/sci-libs/cantera/cantera-2.6.0.ebuild b/sci-libs/cantera/cantera-2.6.0.ebuild
new file mode 100644
index 00000000000..35884d89636
--- /dev/null
+++ b/sci-libs/cantera/cantera-2.6.0.ebuild
@@ -0,0 +1,147 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{8..10} )
+
+FORTRAN_NEEDED=fortran
+FORTRAN_STANDARD="77 90"
+
+inherit fortran-2 python-single-r1 scons-utils toolchain-funcs
+
+DESCRIPTION="Object-oriented tool suite for chemical kinetics, thermodynamics, and transport"
+HOMEPAGE="https://www.cantera.org"
+SRC_URI="https://github.com/Cantera/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="+cti fortran lapack +python test"
+RESTRICT="!test? ( test )"
+
+REQUIRED_USE="
+ python? ( cti )
+ ${PYTHON_REQUIRED_USE}
+"
+
+RDEPEND="
+ ${PYTHON_DEPS}
+ lapack? ( virtual/lapack )
+ cti? (
+ $(python_gen_cond_dep '
+ dev-python/ruamel-yaml[${PYTHON_USEDEP}]
+ ')
+ )
+ python? (
+ $(python_gen_cond_dep '
+ dev-python/numpy[${PYTHON_USEDEP}]
+ ')
+ )
+ dev-cpp/yaml-cpp
+ <sci-libs/sundials-5.9.0:0=[lapack?]
+"
+
+DEPEND="
+ ${RDEPEND}
+ dev-cpp/eigen:3
+ dev-libs/boost
+ dev-libs/libfmt
+ python? (
+ $(python_gen_cond_dep '
+ dev-python/cython[${PYTHON_USEDEP}]
+ dev-python/pip[${PYTHON_USEDEP}]
+ ')
+ )
+ test? (
+ >=dev-cpp/gtest-1.11.0
+ python? (
+ $(python_gen_cond_dep '
+ dev-python/h5py[${PYTHON_USEDEP}]
+ dev-python/pandas[${PYTHON_USEDEP}]
+ dev-python/pytest[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ ')
+ )
+ )
+"
+
+PATCHES=( "${FILESDIR}/${P}_env.patch" )
+
+pkg_setup() {
+ fortran-2_pkg_setup
+ python-single-r1_pkg_setup
+}
+
+## Full list of configuration options of Cantera is presented here:
+## http://cantera.org/docs/sphinx/html/compiling/config-options.html
+src_configure() {
+ scons_vars=(
+ AR="$(tc-getAR)"
+ CC="$(tc-getCC)"
+ CXX="$(tc-getCXX)"
+ cc_flags="${CXXFLAGS}"
+ cxx_flags="-std=c++11"
+ debug="no"
+ FORTRAN="$(tc-getFC)"
+ FORTRANFLAGS="${FCFLAGS}"
+ optimize_flags="-Wno-inline"
+ renamed_shared_libraries="no"
+ use_pch="no"
+ ## In some cases other order can break the detection of right location of Boost: ##
+ system_fmt="y"
+ system_sundials="y"
+ system_eigen="y"
+ system_yamlcpp="y"
+ env_vars="all"
+ extra_inc_dirs="/usr/include/eigen3"
+ )
+ use lapack && scons_vars+=( blas_lapack_libs="lapack,blas" )
+ use test || scons_vars+=( googletest="none" )
+
+ scons_targets=(
+ f90_interface=$(usex fortran y n)
+ )
+
+ if use cti ; then
+ local scons_python=$(usex python full minimal)
+ scons_targets+=( python_package="${scons_python}" python_cmd="${EPYTHON}" )
+ else
+ scons_targets+=( python_package="none" )
+ fi
+}
+
+src_compile() {
+ escons build "${scons_vars[@]}" "${scons_targets[@]}" prefix="/usr"
+}
+
+src_test() {
+ escons test
+}
+
+src_install() {
+ escons install stage_dir="${D}" libdirname="$(get_libdir)"
+ if ! use cti ; then
+ rm -r "${D}/usr/share/man" || die "Can't remove man files."
+ else
+ # Run the byte-compile of modules
+ python_optimize "${D}$(python_get_sitedir)/${PN}"
+ fi
+
+ # User could remove this line if require static libs for development purpose
+ find "${ED}" -name '*.a' -delete || die
+}
+
+pkg_postinst() {
+ if use cti && ! use python ; then
+ elog "Cantera was build without 'python' use-flag therefore the CTI tools 'ck2cti' and 'ck2yaml"
+ elog "will convert Chemkin files to Cantera format without verification of kinetic mechanism."
+ fi
+
+ local post_msg=$(usex fortran "and Fortran " "")
+ elog "C++ ${post_msg}samples are installed to '/usr/share/${PN}/samples/' directory."
+
+ if use python ; then
+ elog "Python examples are installed to '$(python_get_sitedir)/${PN}/examples/' directories."
+ fi
+}
diff --git a/sci-libs/cantera/files/cantera-2.6.0_env.patch b/sci-libs/cantera/files/cantera-2.6.0_env.patch
new file mode 100644
index 00000000000..e49fb4679dd
--- /dev/null
+++ b/sci-libs/cantera/files/cantera-2.6.0_env.patch
@@ -0,0 +1,57 @@
+diff -Naur old/SConstruct new/SConstruct
+--- old/SConstruct
++++ new/SConstruct
+@@ -178,6 +178,10 @@
+
+ config_options = [
+ Option(
++ "AR",
++ "The archiver to use.",
++ "${AR}"),
++ Option(
+ "CXX",
+ "The C++ compiler to use.",
+ "${CXX}"),
+@@ -740,7 +744,7 @@
+ toolchain = ["default"]
+
+ env = Environment(tools=toolchain+["textfile", "subst", "recursiveInstall", "wix", "gch"],
+- ENV={"PATH": os.environ["PATH"]},
++ ENV={'PATH': os.environ['PATH'], 'CCACHE_DIR': os.environ.get('CCACHE_DIR','')},
+ toolchain=toolchain,
+ **extraEnvArgs)
+
+@@ -775,7 +779,7 @@
+
+ add_RegressionTest(env)
+
+-opts.AddVariables(*config.to_scons(["CC", "CXX"], env=env))
++opts.AddVariables(*config.to_scons(["AR", "CC", "CXX"], env=env))
+ opts.Update(env)
+
+ # Check if this is actually Apple's clang on macOS
+@@ -861,11 +865,7 @@
+ env['cantera_pure_version'] = re.match(r'(\d+\.\d+\.\d+)', env['cantera_version']).group(0)
+ env['cantera_short_version'] = re.match(r'(\d+\.\d+)', env['cantera_version']).group(0)
+
+-try:
+- env["git_commit"] = get_command_output("git", "rev-parse", "--short", "HEAD")
+- logger.info(f"Building Cantera from git commit '{env['git_commit']}'")
+-except (subprocess.CalledProcessError, FileNotFoundError):
+- env["git_commit"] = "unknown"
++env["git_commit"] = "unknown"
+
+ # Print values of all build options:
+ # the (updated) "cantera.conf" combines all options that were specified by the user
+diff -Naur old/test_problems/SConscript new/test_problems/SConscript
+--- old/test_problems/SConscript
++++ new/test_problems/SConscript
+@@ -233,7 +233,7 @@
+ artifacts=['vcs_equilibrate_res.csv'])
+
+ CompileAndTest('clib', 'clib_test', 'clib_test',
+- extensions=['^clib_test.c'], libs=localenv['cantera_shared_libs'])
++ extensions=['^clib_test.c'])
+
+ # C++ Samples
+ Test('cxx-bvp', 'cxx_samples', '#build/samples/cxx/bvp/blasius', None,