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author | David Seifert <soap@gentoo.org> | 2020-06-21 15:49:29 +0200 |
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committer | David Seifert <soap@gentoo.org> | 2020-06-21 15:49:29 +0200 |
commit | e551399e2f1a78e5037eb8930c0a53e11d97618c (patch) | |
tree | 86503eb9d2c0ad99769355241a9204759a5008c2 | |
parent | app-antivirus/clamav: new revision to unbundle tomsfastmath. (diff) | |
download | gentoo-e551399e2f1a78e5037eb8930c0a53e11d97618c.tar.gz gentoo-e551399e2f1a78e5037eb8930c0a53e11d97618c.tar.bz2 gentoo-e551399e2f1a78e5037eb8930c0a53e11d97618c.zip |
sci-biology/mcl: [QA] Call AM_PROG_AR
Closes: https://bugs.gentoo.org/725326
Package-Manager: Portage-2.3.101, Repoman-2.3.22
Signed-off-by: David Seifert <soap@gentoo.org>
-rw-r--r-- | sci-biology/mcl/files/mcl-14.137-fix-autotools.patch | 52 | ||||
-rw-r--r-- | sci-biology/mcl/mcl-14.137.ebuild | 16 |
2 files changed, 59 insertions, 9 deletions
diff --git a/sci-biology/mcl/files/mcl-14.137-fix-autotools.patch b/sci-biology/mcl/files/mcl-14.137-fix-autotools.patch new file mode 100644 index 000000000000..0d2c052a91b0 --- /dev/null +++ b/sci-biology/mcl/files/mcl-14.137-fix-autotools.patch @@ -0,0 +1,52 @@ +--- a/configure.ac ++++ b/configure.ac +@@ -144,6 +144,7 @@ + AC_PROG_INSTALL + AC_PROG_LN_S + AC_PROG_RANLIB ++AM_PROG_AR + + # Checks for libraries. + # FIXME: Replace `main' with a function in `-lm': +--- a/doc/Makefile.am ++++ b/doc/Makefile.am +@@ -9,7 +9,6 @@ + ## http://www.w3.org/People/Raggett/tidy/ , by Dave Raggett <dsr@w3.org> + TIDY = tidy + +-docdir = $(datadir)/doc/$(PACKAGE) + + # mclfamily.html mclfamily.ps + +--- a/graphs/Makefile.am ++++ b/graphs/Makefile.am +@@ -1,7 +1,7 @@ + ## Process this file with automake to produce Makefile.in + ## $Id: Makefile.am,v 1.7 2007-01-29 11:35:37 flux Exp $ + +-exampledir = $(datadir)/doc/$(PACKAGE)/examples ++exampledir = $(docdir)/examples + + example_DATA = falkner.mci falkner2.mci falkner.coords make-falkner.pl \ + proteins.mci matula.mci lattice.mci honey.mci seven.mci infinity.mci \ +--- a/img/Makefile.am ++++ b/img/Makefile.am +@@ -1,7 +1,7 @@ + ## Process this file with automake to produce Makefile.in + ## $Id: Makefile.am,v 1.7 2007-01-29 11:35:37 flux Exp $ + +-exampledir = $(datadir)/doc/$(PACKAGE)/examples ++exampledir = $(docdir)/examples + + example_DATA = fa_1024.png fa_400.png fa_600.png fa_large.png fa.ps falkner-bidi.ps falkner.ps small.ps small.png + +--- a/src/alien/oxygen/doc/Makefile.am ++++ b/src/alien/oxygen/doc/Makefile.am +@@ -17,7 +17,6 @@ + ## http://www.w3.org/People/Raggett/tidy/ , by Dave Raggett <dsr@w3.org> + TIDY = tidy + +-docdir = $(datadir)/doc/$(PACKAGE) + + ## zoemtut.html is "on hold": do not install; zoem is not yet ready + ## for prime time diff --git a/sci-biology/mcl/mcl-14.137.ebuild b/sci-biology/mcl/mcl-14.137.ebuild index e48198deca29..40c96e8a4b12 100644 --- a/sci-biology/mcl/mcl-14.137.ebuild +++ b/sci-biology/mcl/mcl-14.137.ebuild @@ -1,7 +1,7 @@ -# Copyright 1999-2015 Gentoo Foundation +# Copyright 1999-2020 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=7 inherit autotools @@ -16,16 +16,14 @@ SLOT="0" KEYWORDS="~amd64 ~x86" IUSE="+blast" -PATCHES=("${FILESDIR}/${P}-qa-implicit-declarations.patch") S="${WORKDIR}/${MY_P}" +PATCHES=( + "${FILESDIR}"/${P}-qa-implicit-declarations.patch + "${FILESDIR}"/${P}-fix-autotools.patch +) + src_prepare() { - find \ - -name Makefile.am \ - -exec sed \ - -e '/docdir/d' \ - -e '/exampledir/s:doc::g' \ - -i '{}' + || die default eautoreconf } |