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authorRobin H. Johnson <robbat2@gentoo.org>2015-08-08 13:49:04 -0700
committerRobin H. Johnson <robbat2@gentoo.org>2015-08-08 17:38:18 -0700
commit56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch)
tree3f91093cdb475e565ae857f1c5a7fd339e2d781e /dev-haskell/biosff
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proj/gentoo: Initial commit
This commit represents a new era for Gentoo: Storing the gentoo-x86 tree in Git, as converted from CVS. This commit is the start of the NEW history. Any historical data is intended to be grafted onto this point. Creation process: 1. Take final CVS checkout snapshot 2. Remove ALL ChangeLog* files 3. Transform all Manifests to thin 4. Remove empty Manifests 5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$ 5.1. Do not touch files with -kb/-ko keyword flags. Signed-off-by: Robin H. Johnson <robbat2@gentoo.org> X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'dev-haskell/biosff')
-rw-r--r--dev-haskell/biosff/Manifest1
-rw-r--r--dev-haskell/biosff/biosff-0.3.7.1.ebuild36
-rw-r--r--dev-haskell/biosff/metadata.xml15
3 files changed, 52 insertions, 0 deletions
diff --git a/dev-haskell/biosff/Manifest b/dev-haskell/biosff/Manifest
new file mode 100644
index 00000000000..5eaf3e81326
--- /dev/null
+++ b/dev-haskell/biosff/Manifest
@@ -0,0 +1 @@
+DIST biosff-0.3.7.1.tar.gz 26705 SHA256 982f238e056c3d65bae94c505da61e91239b624a8446ecee3b03eae258c7bad7 SHA512 ce075d734864b9a00999d5c37c824ece5ba475b583536eb842835b4a44ff56581f18ba8ddf065f2ea4416ff4f96279f6a46f5e57330a43d40164f4cabab2ab9f WHIRLPOOL 5bfb9b47df171165e9a4f03df7b3ec54c7dd07d784940409f703cb51b844449e46329164546525d9a49f8462d9bc0863d9c053b2d9d67d59e21cf99d0829d271
diff --git a/dev-haskell/biosff/biosff-0.3.7.1.ebuild b/dev-haskell/biosff/biosff-0.3.7.1.ebuild
new file mode 100644
index 00000000000..0b7b3912f57
--- /dev/null
+++ b/dev-haskell/biosff/biosff-0.3.7.1.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+# ebuild generated by hackport 0.3.4.9999
+
+CABAL_FEATURES="bin lib profile haddock hoogle hscolour"
+inherit haskell-cabal
+
+DESCRIPTION="Library and executables for working with SFF files"
+HOMEPAGE="http://biohaskell.org/"
+SRC_URI="mirror://hackage/packages/archive/${PN}/${PV}/${P}.tar.gz"
+
+LICENSE="LGPL-2.1"
+SLOT="0/${PV}"
+KEYWORDS="~amd64 ~x86"
+IUSE="+fclip +flower +frecover"
+
+RDEPEND="dev-haskell/binary:=[profile?]
+ >=dev-haskell/biocore-0.3:=[profile?]
+ dev-haskell/cmdargs:=[profile?]
+ >=dev-haskell/mtl-2:=[profile?]
+ >=dev-lang/ghc-7.4.1:=
+"
+DEPEND="${RDEPEND}
+ >=dev-haskell/cabal-1.6
+"
+
+src_configure() {
+ haskell-cabal_src_configure \
+ $(cabal_flag fclip fclip) \
+ $(cabal_flag flower flower) \
+ $(cabal_flag frecover frecover)
+}
diff --git a/dev-haskell/biosff/metadata.xml b/dev-haskell/biosff/metadata.xml
new file mode 100644
index 00000000000..714e2ad3539
--- /dev/null
+++ b/dev-haskell/biosff/metadata.xml
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <herd>haskell</herd>
+ <longdescription>
+ The library contains the functionality for reading and writing
+ SFF files (sequencing data from 454 and Ion Torrent). It duplicates
+ code from (and is incompatible with) the &quot;bio&quot; library.
+ </longdescription>
+ <use>
+ <flag name="fclip">Build the fclip executable.</flag>
+ <flag name="flower">Build the flower executable.</flag>
+ <flag name="frecover">Build the frecover executable.</flag>
+ </use>
+</pkgmetadata>