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authorDavid Seifert <soap@gentoo.org>2022-02-14 00:28:29 +0100
committerDavid Seifert <soap@gentoo.org>2022-02-14 00:28:29 +0100
commit0f52c8b7809ead391dbb3dd363a5b92bd5a1f18f (patch)
treedacefc35eb540acbd9d99c9ac1f8fca4ae8fc501 /eclass/emboss-r3.eclass
parentsci-libs/libxc: drop 5.1.0, 5.1.4, 5.1.6 (diff)
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emboss-r3.eclass: revbump for EAPI 8
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'eclass/emboss-r3.eclass')
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diff --git a/eclass/emboss-r3.eclass b/eclass/emboss-r3.eclass
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+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+# @ECLASS: emboss-r3.eclass
+# @MAINTAINER:
+# sci-biology@gentoo.org
+# @AUTHOR:
+# Original author: Author Olivier Fisette <ofisette@gmail.com>
+# Next gen author: Justin Lecher <jlec@gentoo.org>
+# Next gen author: Ted Tanberry <ted.tanberry@gmail.com>
+# @SUPPORTED_EAPIS: 8
+# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons).
+# @DESCRIPTION:
+# The inheriting ebuild must provide EBO_DESCRIPTION before the inherit line.
+#
+# Example:
+#
+# EAPI=8
+#
+# EBO_DESCRIPTION="applications from the CBS group"
+#
+# inherit emboss-r3
+
+# @ECLASS-VARIABLE: EBO_DESCRIPTION
+# @PRE_INHERIT
+# @DEFAULT_UNSET
+# @DESCRIPTION:
+# Completes the generic description of the embassy module as follows:
+#
+# EMBOSS integrated version of ${EBO_DESCRIPTION}, e.g.
+#
+# "EMBOSS integrated version of applications from the CBS group"
+#
+# Defaults to the upstream name of the module.
+
+case ${EAPI} in
+ 8) ;;
+ *) die "${ECLASS}: EAPI ${EAPI:-0} not supported" ;;
+esac
+
+if [[ ! ${_EMBOSS_R3_ECLASS} ]]; then
+_EMBOSS_R3_ECLASS=1
+
+inherit flag-o-matic
+
+HOMEPAGE="http://emboss.sourceforge.net/"
+
+LICENSE="LGPL-2 GPL-2"
+SLOT="0"
+IUSE="mysql pdf png postgres X"
+
+RDEPEND="
+ dev-libs/expat
+ dev-libs/libpcre:3
+ sci-libs/plplot:=
+ sys-libs/zlib
+ mysql? ( dev-db/mysql-connector-c:0= )
+ pdf? ( media-libs/libharu:= )
+ png? ( media-libs/gd:2=[png] )
+ postgres? ( dev-db/postgresql:= )
+ X? ( x11-libs/libXt )"
+
+if [[ ${PN} == embassy-* ]]; then
+ EMBASSY_PACKAGE=yes
+ # The EMBASSY package name, retrieved from the inheriting ebuild's name
+ EN=${PN:8}
+ # The full name and version of the EMBASSY package (excluding the Gentoo
+ # revision number)
+ EF="${EN^^}-${PV}"
+
+ [[ ${EBO_DESCRIPTION} ]] || die "EBO_DESCRIPTION was not set before inheriting emboss-r3.eclass"
+
+ DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
+ SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PV}.tar.gz"
+ RDEPEND+=" >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]"
+
+ S="${WORKDIR}/${EF}"
+fi
+
+DEPEND="${RDEPEND}"
+
+# @FUNCTION: emboss-r3_src_configure
+# @DESCRIPTION:
+# runs econf with following options.
+#
+# --enable-shared
+# $(use_with X x)
+# $(use_with png pngdriver)
+# $(use_with pdf hpdf)
+# $(use_with mysql mysql)
+# $(use_with postgres postgresql)
+# --enable-large
+# --without-java
+# --enable-systemlibs
+#
+# can be appended to like econf, e.g.
+# emboss-r3_src_configure --enable-foo
+
+emboss-r3_src_configure() {
+ local myconf=(
+ --enable-shared
+ $(use_with X x)
+ $(use_with png pngdriver "${ESYSROOT}"/usr)
+ $(use_with pdf hpdf "${ESYSROOT}"/usr)
+ $(use_with mysql mysql "${EPREFIX}"/usr/bin/mysql_config)
+ $(use_with postgres postgresql "${EPREFIX}"/usr/bin/pg_config)
+ --enable-large
+ --without-java
+ --enable-systemlibs
+ )
+
+ [[ ${EMBASSY_PACKAGE} == yes ]] &&
+ append-cppflags "-I${ESYSROOT}/usr/include/emboss"
+
+ econf "${myconf[@]}" "$@"
+}
+
+# @FUNCTION: emboss-r3_src_install
+# @DESCRIPTION:
+# Installs the package into the staging area and removes unnecessary .la files.
+
+emboss-r3_src_install() {
+ default
+
+ # delete .la files
+ find "${ED}" -name '*.la' -delete || die
+}
+
+fi
+
+EXPORT_FUNCTIONS src_configure src_install