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authorDavid Seifert <soap@gentoo.org>2017-02-19 19:41:38 +0100
committerDavid Seifert <soap@gentoo.org>2017-02-19 19:44:39 +0100
commitb40760bd69c57dae5c57650ee8507e5ac0d54b1c (patch)
treed7f9eda41d0c3bea0672d71435d21d4bf314b024 /eclass
parentsci-biology/embassy-vienna: Remove old (diff)
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sci-biology/emboss: Remove old
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/3937
Diffstat (limited to 'eclass')
-rw-r--r--eclass/emboss-r1.eclass134
1 files changed, 0 insertions, 134 deletions
diff --git a/eclass/emboss-r1.eclass b/eclass/emboss-r1.eclass
deleted file mode 100644
index 2b58de68a2c..00000000000
--- a/eclass/emboss-r1.eclass
+++ /dev/null
@@ -1,134 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-# @ECLASS: emboss-r1.eclass
-# @MAINTAINER:
-# sci-biology@gentoo.org
-# jlec@gentoo.org
-# ted.tanberry@gmail.com
-# @AUTHOR:
-# Original author: Author Olivier Fisette <ofisette@gmail.com>
-# Next gen author: Justin Lecher <jlec@gentoo.org>
-# Next gen author: Ted Tanberry <ted.tanberry@gmail.com>
-# @BLURB: Use this to easy install EMBOSS and EMBASSY programs (EMBOSS add-ons).
-# @DESCRIPTION:
-# The inheriting ebuild must set at least EAPI=5 and provide EBO_DESCRIPTION before the inherit line.
-# KEYWORDS should be set. Additionally "(R|P)DEPEND"encies and other standard
-# ebuild variables can be extended (FOO+=" bar").
-#
-# Example:
-#
-# EAPI="5"
-#
-# EBO_DESCRIPTION="applications from the CBS group"
-#
-# inherit emboss-r1
-
-# @ECLASS-VARIABLE: EBO_DESCRIPTION
-# @DEFAULT_UNSET
-# @DESCRIPTION:
-# Should be set. Completes the generic description of the embassy module as follows:
-#
-# EMBOSS integrated version of ${EBO_DESCRIPTION}, e.g.
-#
-# "EMBOSS integrated version of applications from the CBS group"
-#
-# Defaults to the upstream name of the module.
-
-# @ECLASS-VARIABLE: EBO_EXTRA_ECONF
-# @DEFAULT_UNSET
-# @DESCRIPTION:
-# Extra config options passed to econf.
-
-case ${EAPI:-0} in
- 5) ;;
- *) die "this eclass doesn't support < EAPI 5" ;;
-esac
-
-inherit autotools-utils eutils flag-o-matic
-
-HOMEPAGE="http://emboss.sourceforge.net/"
-LICENSE="LGPL-2 GPL-2"
-
-SLOT="0"
-IUSE="mysql pdf png postgres static-libs X"
-
-DEPEND="
- dev-libs/expat
- dev-libs/libpcre:3
- sci-libs/plplot
- sys-libs/zlib
- mysql? ( virtual/mysql )
- pdf? ( media-libs/libharu )
- png? ( media-libs/gd[png] )
- postgres? ( dev-db/postgresql:= )
- X? ( x11-libs/libXt )"
-RDEPEND="${DEPEND}"
-
-if [[ ${PN} == embassy-* ]]; then
- EMBASSY_PACKAGE=yes
- # The EMBASSY package name, retrieved from the inheriting ebuild's name
- EN=${PN:8}
- # The full name and version of the EMBASSY package (excluding the Gentoo
- # revision number)
- EF=$(echo ${EN} | tr "[:lower:]" "[:upper:]")-${PV}
- : ${EBO_DESCRIPTION:=${EN}}
- DESCRIPTION="EMBOSS integrated version of ${EBO_DESCRIPTION}"
- SRC_URI="ftp://emboss.open-bio.org/pub/EMBOSS/${EF}.tar.gz -> embassy-${EN}-${PVR}.tar.gz"
- DEPEND+=" >=sci-biology/emboss-6.6.0[mysql=,pdf=,png=,postgres=,static-libs=,X=]"
-
- S="${WORKDIR}"/${EF}
-fi
-
-# @FUNCTION: emboss-r1_src_prepare
-# @DESCRIPTION:
-# Does the following things
-#
-# 1. Renames configure.in to configure.ac, if possible
-# 2. Applies ${PATCHES[@]} and runs autotools via autotools-utils.eclass
-#
-
-emboss-r1_src_prepare() {
- if [[ -e configure.in ]]; then
- mv configure.{in,ac} || die
- fi
-
- autotools-utils_src_prepare
-}
-
-# @FUNCTION: emboss-r1_src_configure
-# @DESCRIPTION:
-# runs econf with following options.
-#
-# $(use_with X x)
-# $(use_with png pngdriver)
-# $(use_with pdf hpdf)
-# $(use_with mysql mysql)
-# $(use_with postgres postgresql)
-# $(use_enable static-libs static)
-# --enable-large
-# --without-java
-# --enable-systemlibs
-# ${EBO_EXTRA_ECONF}
-
-emboss-r1_src_configure() {
- local myeconfargs=(
- $(use_with X x)
- $(use_with png pngdriver "${EPREFIX}/usr")
- $(use_with pdf hpdf "${EPREFIX}/usr")
- $(use_with mysql mysql "${EPREFIX}/usr/bin/mysql_config")
- $(use_with postgres postgresql "${EPREFIX}/usr/bin/pg_config")
- --enable-large
- --without-java
- --enable-systemlibs
- ${EBO_EXTRA_ECONF}
- )
-
- [[ ${EMBASSY_PACKAGE} == yes ]] && \
- append-cppflags "-I${EPREFIX}/usr/include/emboss"
-
- autotools-utils_src_configure
-}
-
-EXPORT_FUNCTIONS src_prepare src_configure