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authorDavid Seifert <soap@gentoo.org>2016-09-03 10:55:18 +0200
committerDavid Seifert <soap@gentoo.org>2016-09-03 10:55:18 +0200
commit9574df41e529782826a9e6b32bdbac1678f47875 (patch)
tree2edb5ce830068f38609d5430a0c5094cc2749894 /sci-biology/bwa/bwa-0.7.13.ebuild
parentsci-biology/tophat: Various QA fixes, handle python properly (diff)
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sci-biology/bwa: Version bump to 0.7.15
Package-Manager: portage-2.3.0
Diffstat (limited to 'sci-biology/bwa/bwa-0.7.13.ebuild')
-rw-r--r--sci-biology/bwa/bwa-0.7.13.ebuild38
1 files changed, 0 insertions, 38 deletions
diff --git a/sci-biology/bwa/bwa-0.7.13.ebuild b/sci-biology/bwa/bwa-0.7.13.ebuild
deleted file mode 100644
index 2ce3ff34f35..00000000000
--- a/sci-biology/bwa/bwa-0.7.13.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=6
-
-inherit toolchain-funcs
-
-DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
-HOMEPAGE="http://bio-bwa.sourceforge.net/"
-SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="~amd64 ~x86 ~x64-macos"
-
-RDEPEND="dev-lang/perl"
-
-PATCHES=(
- "${FILESDIR}"/${P}-Makefile.patch
-)
-
-src_prepare() {
- default
- tc-export CC AR
-}
-
-src_install() {
- dobin bwa
-
- doman bwa.1
-
- exeinto /usr/libexec/${PN}
- doexe qualfa2fq.pl xa2multi.pl
-
- dodoc NEWS.md README-alt.md README.md
-}