summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorAndreas Sturmlechner <asturm@gentoo.org>2018-10-14 18:30:19 +0200
committerAndreas Sturmlechner <asturm@gentoo.org>2018-10-14 18:34:29 +0200
commitfad62bd824b9ea69a19200061544567eb9e78730 (patch)
treeddc5b06edb6be5dfded0123b16c12069e2f29bc8 /sci-biology
parentsci-biology/express: EAPI-6 bump (diff)
downloadgentoo-fad62bd824b9ea69a19200061544567eb9e78730.tar.gz
gentoo-fad62bd824b9ea69a19200061544567eb9e78730.tar.bz2
gentoo-fad62bd824b9ea69a19200061544567eb9e78730.zip
sci-biology/express: Drop old
Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org> Package-Manager: Portage-2.3.51, Repoman-2.3.11
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/express/Manifest1
-rw-r--r--sci-biology/express/express-0.9.5-r1.ebuild35
2 files changed, 0 insertions, 36 deletions
diff --git a/sci-biology/express/Manifest b/sci-biology/express/Manifest
index 2e05adafed7..9c2cc4ebf49 100644
--- a/sci-biology/express/Manifest
+++ b/sci-biology/express/Manifest
@@ -1,2 +1 @@
-DIST express-0.9.5-src.tgz 766024 BLAKE2B 3818bc9de30a5201d587d3e18feee85f3014b68672eaef32ce0fa5989e0ce2cd7ee8bb8c617db0cde2d061db0f31ba76c49aa03f66be92c40826a6ede35ebca9 SHA512 3a7360ffbe57f4f712b6db38d551d31384d995050a86238d79299edb12f0e7f5dca6f362b7858b5051ea2879af2b3559f78f9780d75ef2ef6fdad7398f781403
DIST express-1.5.1-src.tgz 931166 BLAKE2B 5eb185e4b001f26f0dd32885b256b9fa48c89f546d67d7f8472cade69dde25375a5fc8efed5f01b615d63b641b674f7034a13f9483eb7967a6fd784a55c8878e SHA512 59cf6511a879311247c65334285ea056d571d4fd950aa6243041fa10075ff0d1ddd2afbcfe12e5f7f3e7cdd22fe37fd7f6b43ed4a8eb28d7a33d72366dc549ee
diff --git a/sci-biology/express/express-0.9.5-r1.ebuild b/sci-biology/express/express-0.9.5-r1.ebuild
deleted file mode 100644
index 945398a17a8..00000000000
--- a/sci-biology/express/express-0.9.5-r1.ebuild
+++ /dev/null
@@ -1,35 +0,0 @@
-# Copyright 1999-2014 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit cmake-utils
-
-DESCRIPTION="Streaming RNA-Seq Analysis"
-HOMEPAGE="http://bio.math.berkeley.edu/eXpress/"
-SRC_URI="http://bio.math.berkeley.edu/eXpress/downloads/express-${PV}/express-${PV}-src.tgz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND="
- >=dev-libs/boost-1.52.0:=
- sys-libs/zlib
- sci-biology/bamtools"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${P}-src"
-
-CMAKE_USE_DIR="${S}/src"
-
-src_prepare() {
- sed \
- -e 's|"${CMAKE_CURRENT_SOURCE_DIR}/../bamtools/lib/libbamtools.a"|bamtools|' \
- -e '1 a find_package(Boost 1.52 COMPONENTS filesystem program_options system thread)' \
- -e '1 a find_package(ZLIB)' \
- -e '/add_executable/ a include_directories("/usr/include/bamtools")' \
- -i src/CMakeLists.txt || die
-
- cmake-utils_src_prepare
-}