proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

6 files changed, 440 insertions, 0 deletions

diff --git a/sci-chemistry/openbabel-python/Manifest b/sci-chemistry/openbabel-python/Manifest
new file mode 100644
index 000000000000..082e5b029843
--- /dev/null
+++ b/sci-chemistry/openbabel-python/Manifest
@@ -0,0 +1 @@
+DIST openbabel-2.3.2.tar.gz 20509105 SHA256 4eaca26679aa6cc85ebf96af19191472ac63ca442c36b0427b369c3a25705188 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919 WHIRLPOOL 74eff18b73d24c8f702e5573a58ba6afba8402e9ce8782de95dc0568575a7d2d632dbc8e8a98b3cd25efdfa7379494f7dcd449342c81ddf73f42a387bce77aaa
diff --git a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-bindings_only.patch b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-bindings_only.patch
new file mode 100644
index 000000000000..2e776b4029ec
--- /dev/null
+++ b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-bindings_only.patch
@@ -0,0 +1,209 @@
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 449f4b4..1c9ad00 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -252,7 +252,8 @@ if(NOT MSVC)
+     }
+    " SCANDIR_NEEDS_CONST)
+ 
+-  set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}")
++  set(OB_MODULE_PATH "${CMAKE_INSTALL_PREFIX}/${OB_PLUGIN_INSTALL_DIR}"
++      CACHE PATH "Set to system install for bindings only build")
+   add_definitions(-DOB_MODULE_PATH="\\"${OB_MODULE_PATH}\\"")
+ 
+   # Add some visibility support when using GCC
+@@ -380,7 +381,8 @@ if(UNIX AND BUILD_SHARED)
+   if(APPLE)
+     set(CMAKE_INSTALL_NAME_DIR ${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR})
+   else()
+-    set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}")
++    set(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${LIB_INSTALL_DIR}"
++        CACHE PATH "Set sane rpath")
+     set(CMAKE_SKIP_BUILD_RPATH FALSE)
+     set(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)
+     set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
+@@ -477,6 +479,13 @@ endif()
+ # Should the language bindings be regenereted?
+ option(RUN_SWIG "Generate language bindings with SWIG" OFF)
+ 
++# Build bindings only
++option(BINDINGS_ONLY "Build bindings only" OFF)
++
++# Point to library if building bindings only
++set(BABEL_SYSTEM_LIBRARY ${BABEL_LIBRARY}
++    CACHE PATH "Point to openbabel library if building bindings only")
++
+ # Should all bindings be built?
+ option(ALL_BINDINGS "Build all languages bindings" OFF)
+ 
+diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt
+index 16e9000..ecd2295 100644
+--- a/scripts/CMakeLists.txt
++++ b/scripts/CMakeLists.txt
+@@ -92,16 +92,30 @@ if (DO_PYTHON_BINDINGS)
+     endif(RUN_SWIG)
+ 
+     add_library(bindings_python MODULE ${openbabel_SOURCE_DIR}/scripts/python/openbabel-python.cpp)
+-    target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY})
++    if(BINDINGS_ONLY)
++        target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_SYSTEM_LIBRARY})
++    else()
++        target_link_libraries(bindings_python ${PYTHON_LIBRARIES} ${BABEL_LIBRARY})
++    endif()
++
+     if(NOT WIN32)
+         set_target_properties(bindings_python PROPERTIES
+             OUTPUT_NAME _openbabel
+             PREFIX ""
+             SUFFIX .so )
+-        add_dependencies(bindings_python openbabel)
+-        install(TARGETS bindings_python LIBRARY DESTINATION ${LIB_INSTALL_DIR})
+-        install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py DESTINATION ${LIB_INSTALL_DIR})
+-        install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py DESTINATION ${LIB_INSTALL_DIR})
++        if(NOT BINDINGS_ONLY)
++            add_dependencies(bindings_python openbabel)
++        endif()
++
++        install(TARGETS bindings_python
++                LIBRARY DESTINATION ${LIB_INSTALL_DIR}
++                COMPONENT bindings_python)
++        install(FILES ${openbabel_SOURCE_DIR}/scripts/python/openbabel.py
++                DESTINATION ${LIB_INSTALL_DIR}
++                COMPONENT bindings_python)
++        install(FILES ${openbabel_SOURCE_DIR}/scripts/python/pybel.py
++                DESTINATION ${LIB_INSTALL_DIR}
++                COMPONENT bindings_python)
+     else(NOT WIN32)
+         set_target_properties(bindings_python PROPERTIES
+             OUTPUT_NAME _openbabel
+diff --git a/test/CMakeLists.txt b/test/CMakeLists.txt
+index 7841782..6f3495f 100644
+--- a/test/CMakeLists.txt
++++ b/test/CMakeLists.txt
+@@ -2,7 +2,12 @@
+ add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"")
+ 
+ # define FORMATDIR for location of format plugin binaries
+-add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib/\\"")
++if(BINDINGS_ONLY)
++  set(FORMATDIR "${OB_MODULE_PATH}/")
++else()
++  set(FORMATDIR "${openbabel_BINARY_DIR}/lib${LIB_SUFFIX}/")
++endif()
++add_definitions(-DFORMATDIR="\\"${FORMATDIR}/\\"")
+ 
+ ###########################################################
+ #  new tests using obtest.h
+@@ -89,7 +94,7 @@ foreach(test ${tests})
+   add_test(${test}_Test ${TEST_PATH}/test_${test})
+   set_tests_properties(${test}_Test PROPERTIES
+     FAIL_REGULAR_EXPRESSION "ERROR;FAIL;Test failed"
+-    ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib")
++    ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}")
+ endforeach(test ${tests})
+ 
+ ############################################################
+@@ -152,7 +157,7 @@ if(WITH_INCHI)
+              ${TEST_PATH}/test_inchiwrite ${inchidata}/${test} ${inchidata}/${test}.txt)
+     set_tests_properties(inchi${test}_Test PROPERTIES
+                          FAIL_REGULAR_EXPRESSION "Not ok"
+-                         ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib"
++                         ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
+     )
+   endforeach(test ${inchitests})
+ endif(WITH_INCHI)
+@@ -166,7 +171,7 @@ foreach(test ${old_tests})
+   add_test(${test}_Test ${TEST_PATH}/test_${test})
+   set_tests_properties(${test}_Test PROPERTIES
+     FAIL_REGULAR_EXPRESSION "not ok"
+-    ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib"
++    ENVIRONMENT "BABEL_DATADIR=${CMAKE_SOURCE_DIR}/data;LD_LIBRARY_PATH=${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
+  )
+ endforeach(test ${old_tests})
+ 
+@@ -181,8 +186,8 @@ if(NOT BUILD_SHARED AND NOT BUILD_MIXED)
+ endif()
+ install(TARGETS roundtrip
+                 RUNTIME DESTINATION bin
+-                LIBRARY DESTINATION lib
+-                ARCHIVE DESTINATION lib
++                LIBRARY DESTINATION lib${LIB_SUFFIX}
++                ARCHIVE DESTINATION lib${LIB_SUFFIX}
+ )
+ 
+ ###########################
+@@ -199,10 +204,10 @@ if(NOT MINGW AND NOT CYGWIN)
+         babel sym smartssym fastsearch unique kekule)
+     foreach(pytest ${pytests})
+     SET_SOURCE_FILES_PROPERTIES(test${pytest}.py PROPERTIES
+-      PYTHONPATH "${CMAKE_SOURCE_DIR}/scripts/python:${CMAKE_BINARY_DIR}/lib"
+-      BABEL_LIBDIR "${CMAKE_BINARY_DIR}/lib"
++      PYTHONPATH "${CMAKE_SOURCE_DIR}/scripts/python:${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
++      BABEL_LIBDIR "${FORMATDIR}"
+       BABEL_DATADIR "${CMAKE_SOURCE_DIR}/data"
+-      LD_LIBRARY_PATH "${CMAKE_BINARY_DIR}/lib"
++      LD_LIBRARY_PATH "${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
+     )
+       ADD_PYTHON_TEST(pytest_${pytest} test${pytest}.py)
+       set_tests_properties(pytest_${pytest} PROPERTIES
+@@ -221,10 +226,10 @@ if (PYTHON_BINDINGS)
+       bindings _pybel example)
+   foreach(pybindtest ${pybindtests})
+     SET_SOURCE_FILES_PROPERTIES(test${pybindtest}.py PROPERTIES
+-        PYTHONPATH "${CMAKE_SOURCE_DIR}/scripts/python:${CMAKE_BINARY_DIR}/lib"
+-        BABEL_LIBDIR "${CMAKE_BINARY_DIR}/lib"
++        PYTHONPATH "${CMAKE_SOURCE_DIR}/scripts/python:${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
++        BABEL_LIBDIR "${FORMATDIR}"
+         BABEL_DATADIR "${CMAKE_SOURCE_DIR}/data"
+-        LD_LIBRARY_PATH "${CMAKE_BINARY_DIR}/lib"
++        LD_LIBRARY_PATH "${CMAKE_BINARY_DIR}/lib${LIB_SUFFIX}"
+     )
+     if(MSVC)
+       SET_SOURCE_FILES_PROPERTIES(test${pybindtest}.py PROPERTIES
+diff --git a/tools/CMakeLists.txt b/tools/CMakeLists.txt
+index 1f547bf..fb98441 100644
+--- a/tools/CMakeLists.txt
++++ b/tools/CMakeLists.txt
+@@ -38,8 +38,8 @@ if(BUILD_SHARED)
+     target_link_libraries(${tool} ${BABEL_LIBRARY})
+     install(TARGETS ${tool}
+                     RUNTIME DESTINATION bin
+-                    LIBRARY DESTINATION lib
+-                    ARCHIVE DESTINATION lib
++                    LIBRARY DESTINATION lib${LIB_SUFFIX}
++                    ARCHIVE DESTINATION lib${LIB_SUFFIX}
+     )
+   endforeach(tool)
+ 
+@@ -53,8 +53,8 @@ if(BUILD_SHARED)
+     target_link_libraries(obspectrophore ${BABEL_LIBRARY})
+     install(TARGETS obspectrophore
+                     RUNTIME DESTINATION bin
+-                    LIBRARY DESTINATION lib
+-                    ARCHIVE DESTINATION lib
++                    LIBRARY DESTINATION lib${LIB_SUFFIX}
++                    ARCHIVE DESTINATION lib${LIB_SUFFIX}
+     )
+ 
+     # obgrep -- requires getopt
+@@ -66,8 +66,8 @@ if(BUILD_SHARED)
+       target_link_libraries(obgrep ${BABEL_LIBRARY})
+       install(TARGETS obgrep
+                       RUNTIME DESTINATION bin
+-                      LIBRARY DESTINATION lib
+-                      ARCHIVE DESTINATION lib
++                      LIBRARY DESTINATION lib${LIB_SUFFIX}
++                      ARCHIVE DESTINATION lib${LIB_SUFFIX}
+       )
+   endif(NOT MINIMAL_BUILD)
+ 
+@@ -146,7 +146,7 @@ else(BUILD_SHARED)
+ 
+   install(TARGETS babel
+           RUNTIME DESTINATION bin
+-          LIBRARY DESTINATION lib
+-          ARCHIVE DESTINATION lib)
++          LIBRARY DESTINATION lib${LIB_SUFFIX}
++          ARCHIVE DESTINATION lib${LIB_SUFFIX})
+ 
+ endif(BUILD_SHARED)
diff --git a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch
new file mode 100644
index 000000000000..d30efd55bd92
--- /dev/null
+++ b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-swig-3.0.3.patch
@@ -0,0 +1,97 @@
+ scripts/openbabel-python.i | 34 +++++++++++++++++-----------------
+ 1 file changed, 17 insertions(+), 17 deletions(-)
+
+diff --git a/scripts/openbabel-python.i b/scripts/openbabel-python.i
+index 7cb8f24..d893129 100644
+--- a/scripts/openbabel-python.i
++++ b/scripts/openbabel-python.i
+@@ -227,7 +227,7 @@ CAST_GENERICDATA_TO(SquarePlanarStereo)
+ %include <openbabel/math/transform3d.h>
+ %include <openbabel/math/spacegroup.h>
+ 
+-# CloneData should be used instead of the following method
++// CloneData should be used instead of the following method
+ %ignore OpenBabel::OBBase::SetData;
+ %include <openbabel/base.h>
+ 
+@@ -289,7 +289,7 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
+ %ignore OpenBabel::OBDescriptor::LessThan;
+ %include <openbabel/descriptor.h>
+ 
+-# Ignore shadowed methods
++// Ignore shadowed methods
+ %ignore OpenBabel::OBForceField::VectorSubtract(const double *const, const double *const, double *);
+ %ignore OpenBabel::OBForceField::VectorMultiply(const double *const, const double, double *);
+ %include <openbabel/forcefield.h>
+@@ -310,7 +310,7 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
+ 
+ %warnfilter(503) OpenBabel::OBBitVec; // Not wrapping any of the overloaded operators
+ %include <openbabel/bitvec.h>
+-# Ignore shadowed method
++// Ignore shadowed method
+ %ignore OpenBabel::OBRotor::GetRotAtoms() const;
+ %include <openbabel/rotor.h>
+ %ignore OpenBabel::Swab;
+@@ -321,13 +321,13 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
+ %include <openbabel/math/align.h>
+ #endif
+ 
+-# The following %ignores avoid warning messages due to shadowed classes.
+-# This does not imply a loss of functionality as (in this case)
+-# the shadowed class is identical (from the point of view of SWIG) to
+-# the shadowing class.
+-# This is because C++ references (&) are transformed by SWIG back into
+-# pointers, so that OBAtomIter(OBMol &) would be treated the same as
+-# OBAtomIter(OBMol *).
++// The following %ignores avoid warning messages due to shadowed classes.
++// This does not imply a loss of functionality as (in this case)
++// the shadowed class is identical (from the point of view of SWIG) to
++// the shadowing class.
++// This is because C++ references (&) are transformed by SWIG back into
++// pointers, so that OBAtomIter(OBMol &) would be treated the same as
++// OBAtomIter(OBMol *).
+ 
+ %ignore OBAtomAtomIter(OBAtom &);
+ %ignore OBAtomBondIter(OBAtom &);
+@@ -346,9 +346,9 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
+ %ignore OBResidueIter(OBMol &);
+ %ignore OBResidueAtomIter(OBResidue &);
+ 
+-# These classes are renamed so that they can be replaced by Python
+-# classes of the same name which provide Pythonic iterators
+-# (see %pythoncode section below)
++// These classes are renamed so that they can be replaced by Python
++// classes of the same name which provide Pythonic iterators
++// (see %pythoncode section below)
+ 
+ %rename(_OBAtomAtomIter) OpenBabel::OBAtomAtomIter;
+ %rename(_OBAtomBondIter) OpenBabel::OBAtomBondIter;
+@@ -367,8 +367,8 @@ OBMol.BeginResidues = OBMol.EndResidues = OBMol.BeginResidue = OBMol.EndResidue
+ 
+ %include <openbabel/obiter.h>
+ 
+-# The following class, OBiter, is subclassed to provide Python iterators
+-# equivalent to the C++ iterators in obiter.h and the plugin iterators
++// The following class, OBiter, is subclassed to provide Python iterators
++// equivalent to the C++ iterators in obiter.h and the plugin iterators
+ 
+ %pythoncode %{
+ class OBIter(object):
+@@ -459,7 +459,7 @@ def double_array(mylist):
+     return c
+ %}
+ 
+-# Copy some of the global variables in cvar into the openbabel namespace
++// Copy some of the global variables in cvar into the openbabel namespace
+ 
+ %pythoncode %{
+ obErrorLog = cvar.obErrorLog
+@@ -470,7 +470,7 @@ atomtyper = cvar.atomtyper
+ aromtyper = cvar.aromtyper
+ %}
+ 
+-# Functions to set the log file to std::cout and std::cerr
++// Functions to set the log file to std::cout and std::cerr
+        
+ %ignore OBForceField::SetLogFile(std::ostream *pos);
+ %extend OpenBabel::OBForceField {
diff --git a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-testpybel.patch b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-testpybel.patch
new file mode 100644
index 000000000000..7a0114975fff
--- /dev/null
+++ b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.2-testpybel.patch
@@ -0,0 +1,28 @@
+From b34edb6de512e5735d87cb0893804a4abd14f9b7 Mon Sep 17 00:00:00 2001
+From: baoilleach <baoilleach@71e0b675-c112-0410-beda-96664073b5c2>
+Date: Mon, 1 Oct 2012 20:40:36 +0000
+Subject: [PATCH] scripts/python/testpybel.py: Minor fix to enable failing
+ test to pass. Failures due to the new MOL Chiral Flag data
+ that I stored a while ago.
+
+git-svn-id: https://openbabel.svn.sourceforge.net/svnroot/openbabel/openbabel/trunk@5022 71e0b675-c112-0410-beda-96664073b5c2
+---
+ scripts/python/examples/testpybel.py | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/scripts/python/examples/testpybel.py b/scripts/python/examples/testpybel.py
+index aa5fcd4..7951851 100644
+--- a/scripts/python/examples/testpybel.py
++++ b/scripts/python/examples/testpybel.py
+@@ -336,7 +336,7 @@ class TestPybel(TestToolkit):
+     tpsaname = "TPSA"
+     Nbits = 3
+     Nfpbits = 32
+-    datakeys = ['NSC', 'Comment', 'OpenBabel Symmetry Classes']
++    datakeys = ['NSC', 'Comment', 'OpenBabel Symmetry Classes', 'MOL Chiral Flag']
+ 
+     def testFP_FP3(self):
+         "Checking the results from FP3"
+-- 
+1.7.12.3
+
diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml
new file mode 100644
index 000000000000..2fec701db8fc
--- /dev/null
+++ b/sci-chemistry/openbabel-python/metadata.xml
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+  <longdescription>
+OpenBabel is a chemical toolbox designed to speak the many languages of
+chemical data. It's an open, collaborative project allowing anyone to
+search, convert, analyze, or store data from molecular modeling, chemistry,
+solid-state materials, biochemistry, or related areas. This package enables
+to access OpenBabel library from Python programs.
+</longdescription>
+  <upstream>
+    <remote-id type="sourceforge">openbabel</remote-id>
+  </upstream>
+</pkgmetadata>
diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
new file mode 100644
index 000000000000..593e536eb844
--- /dev/null
+++ b/sci-chemistry/openbabel-python/openbabel-python-2.3.2.ebuild
@@ -0,0 +1,90 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 python3_{3,4} )
+
+inherit cmake-utils eutils multilib python-r1
+
+DESCRIPTION="Python bindings for OpenBabel (including Pybel)"
+HOMEPAGE="http://openbabel.sourceforge.net/"
+SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz"
+
+KEYWORDS="amd64 ~arm ppc x86 ~amd64-linux ~x86-linux"
+SLOT="0"
+LICENSE="GPL-2"
+IUSE=""
+
+REQUIRED_USE="${PYTHON_REQUIRED_USE}"
+
+RDEPEND="${PYTHON_DEPS}
+	!sci-chemistry/babel
+	~sci-chemistry/openbabel-${PV}
+	sys-libs/zlib"
+DEPEND="${RDEPEND}
+	>=dev-lang/swig-2"
+
+S="${WORKDIR}"/openbabel-${PV}
+
+PATCHES=(
+	"${FILESDIR}"/${P}-testpybel.patch
+	"${FILESDIR}"/${P}-bindings_only.patch
+	"${FILESDIR}"/${P}-swig-3.0.3.patch
+	)
+
+src_prepare() {
+	cmake-utils_src_prepare
+	sed \
+		-e "s:\"\.\.\":\"${EPREFIX}/usr\":g" \
+		-i test/testbabel.py || die
+	swig -python -c++ -small -O -templatereduce -naturalvar \
+		-I"${EPREFIX}/usr/include/openbabel-2.0" \
+		-o scripts/python/openbabel-python.cpp \
+		-DHAVE_EIGEN \
+		-outdir scripts/python \
+		scripts/openbabel-python.i \
+		|| die "Regeneration of openbabel-python.cpp failed"
+}
+
+src_configure() {
+	my_impl_src_configure() {
+		local mycmakeargs="${mycmakeargs}
+			-DCMAKE_INSTALL_RPATH=
+			-DBINDINGS_ONLY=ON
+			-DBABEL_SYSTEM_LIBRARY="${EPREFIX}/usr/$(get_libdir)/libopenbabel.so"
+			-DOB_MODULE_PATH="${EPREFIX}/usr/$(get_libdir)/openbabel/${PV}"
+			-DLIB_INSTALL_DIR="${ED}/usr/$(get_libdir)/${EPYTHON}/site-packages"
+			-DPYTHON_BINDINGS=ON
+			-DPYTHON_EXECUTABLE=${PYTHON}
+			-DPYTHON_INCLUDE_DIR="${EPREFIX}/usr/include/${EPYTHON}"
+			-DPYTHON_INCLUDE_PATH="${EPREFIX}/usr/include/${EPYTHON}"
+			-DPYTHON_LIBRARY="${EPREFIX}/usr/$(get_libdir)/lib${EPYTHON}.so"
+			-DENABLE_TESTS=ON"
+
+		cmake-utils_src_configure
+	}
+
+	python_foreach_impl my_impl_src_configure
+}
+
+src_compile() {
+	python_foreach_impl cmake-utils_src_make bindings_python
+}
+
+src_test() {
+	python_foreach_impl cmake-utils_src_test -R py
+}
+
+src_install() {
+	my_impl_src_install() {
+		cd "${BUILD_DIR}" || die
+
+		cmake -DCOMPONENT=bindings_python -P cmake_install.cmake
+
+		python_optimize
+	}
+
+	python_foreach_impl my_impl_src_install
+}