diff options
| author |   Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 13:49:04 -0700 |
|---|---|---|
| committer | Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 17:38:18 -0700 |
| commit | 56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch) | |
| tree | 3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-misc | |
| download | gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.gz gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.bz2 gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.zip | |
proj/gentoo: Initial commit
This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.
This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.
Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-misc')
83 files changed, 2751 insertions, 0 deletions
diff --git a/sci-misc/ViSP-images/Manifest b/sci-misc/ViSP-images/Manifest new file mode 100644 index 000000000000..7f3fb8d07a4a --- /dev/null +++ b/sci-misc/ViSP-images/Manifest @@ -0,0 +1 @@ +DIST ViSP-images-2.10.0.zip 70776344 SHA256 9e4638f583aa12de03e6bdd7d35378ee62df6a5511bf3adf4da6f194cc45d7c1 SHA512 8e44216d3dd54e775544cbd8db156e846d5d7600d205fdfe16100313237b8b9bb7989b8e4272ff9d6e7ec593f121764e1acda93420f1175448e57b5baf2bbcfb WHIRLPOOL b2c8be0812322ab778025d6c6a69f14bccb16c44ea25cbb9828f2d3588cf5e1068ed4b29fbc3977abd3736faa44a4c5032f0397f8db8557e42b2ad06e0a245be diff --git a/sci-misc/ViSP-images/ViSP-images-2.10.0.ebuild b/sci-misc/ViSP-images/ViSP-images-2.10.0.ebuild new file mode 100644 index 000000000000..ab62d45bb383 --- /dev/null +++ b/sci-misc/ViSP-images/ViSP-images-2.10.0.ebuild @@ -0,0 +1,25 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +DESCRIPTION="ViSP images data set" +HOMEPAGE="http://www.irisa.fr/lagadic/visp/" +SRC_URI="http://www.irisa.fr/lagadic/visp/download/sequence/ViSP-images-${PV}.zip" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~arm" +IUSE="" + +DEPEND="app-arch/unzip" +RDEPEND="" +S="${WORKDIR}/${PN}" + +src_install() { + dodoc README ChangeLog + rm -f README LICENSE.txt ChangeLog + dodir /usr/share/visp-images-data/ + mv "${S}" "${ED}/usr/share/visp-images-data/" +} diff --git a/sci-misc/ViSP-images/metadata.xml b/sci-misc/ViSP-images/metadata.xml new file mode 100644 index 000000000000..e7dd05f66879 --- /dev/null +++ b/sci-misc/ViSP-images/metadata.xml @@ -0,0 +1,8 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<maintainer> +<email>aballier@gentoo.org</email> +<name>Alexis Ballier</name> +</maintainer> +</pkgmetadata> diff --git a/sci-misc/apertium/Manifest b/sci-misc/apertium/Manifest new file mode 100644 index 000000000000..676f259b7e51 --- /dev/null +++ b/sci-misc/apertium/Manifest @@ -0,0 +1 @@ +DIST apertium-3.2.0.tar.gz 767311 SHA256 6ce2fdc85da5d1e50d69da2e50cc97a87b689476f2c83417765636d9a4b7e9ac SHA512 ec80d72480e414eb9a169241d0921b21009dde7c1da9a773f500f16ac785741be1f4a221c25b3b32e7847405f76e93b5feadb6f541170c0742718e27dfa1fb25 WHIRLPOOL 44b8c6fcda7abe363540d1b3ce344322bec60ff1b822ffb5f228a50b156f9660798a9aafa3c9ccf25652cf858be32efb41b06d5d05e7d8fd3284db7d81aac4a4 diff --git a/sci-misc/apertium/apertium-3.2.0.ebuild b/sci-misc/apertium/apertium-3.2.0.ebuild new file mode 100644 index 000000000000..1cce57a6fe7e --- /dev/null +++ b/sci-misc/apertium/apertium-3.2.0.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils + +DESCRIPTION="Shallow-transfer machine Translation engine and toolbox" +HOMEPAGE="http://apertium.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86" +IUSE="static-libs" + +RDEPEND=" + dev-libs/libxslt + dev-libs/libpcre[cxx] + >=sci-misc/lttoolbox-3.2 + virtual/libiconv" +DEPEND="${RDEPEND} + virtual/pkgconfig" + +PATCHES=( + "${FILESDIR}"/${PV}-flags.patch + "${FILESDIR}"/${PV}-datadir.patch + "${FILESDIR}"/${P}-libpcre.patch + ) + +MAKEOPTS+=" -j1" +AUTOTOOLS_IN_SOURCE_BUILD=1 diff --git a/sci-misc/apertium/files/3.2.0-datadir.patch b/sci-misc/apertium/files/3.2.0-datadir.patch new file mode 100644 index 000000000000..d081cd50bc79 --- /dev/null +++ b/sci-misc/apertium/files/3.2.0-datadir.patch @@ -0,0 +1,35 @@ +diff -Nur apertium-3.2.0.orig/apertium/Makefile.am apertium-3.2.0/apertium/Makefile.am +--- apertium-3.2.0.orig/apertium/Makefile.am 2011-07-29 06:55:49.000000000 +0100 ++++ apertium-3.2.0/apertium/Makefile.am 2011-07-29 07:03:58.000000000 +0100 +@@ -66,10 +66,10 @@ + + instdir = apertium + +-apertiumdir = $(prefix)/share/apertium ++apertiumdir = $(datadir)/ + apertiuminclude = $(prefix)/include/apertium-$(GENERIC_API_VERSION) + apertiumlib = $(prefix)/lib +-apertiumsysconf = $(prefix)/etc/apertium ++apertiumsysconf = $(sysconfdir)/apertium + + apertium_DATA = deformat.xsl reformat.xsl new2old.xsl lexchoice.xsl \ + lexchoicebil.xsl tagger.dtd interchunk.dtd format.dtd \ +diff -Nur apertium-3.2.0.orig/Makefile.am apertium-3.2.0/Makefile.am +--- apertium-3.2.0.orig/Makefile.am 2011-07-29 06:55:49.000000000 +0100 ++++ apertium-3.2.0/Makefile.am 2011-07-29 07:08:39.000000000 +0100 +@@ -1,13 +1,10 @@ + SUBDIRS = $(GENERIC_LIBRARY_NAME) + DIST_SUBDIRS = $(GENERIC_LIBRARY_NAME) + +-modesdir=$(prefix)/share/apertium/modes ++modesdir = $(datadir)/apertium/modes ++modes_DATA = README-MODES + + pkgconfigdir = $(libdir)/pkgconfig + pkgconfig_DATA = apertium-$(GENERIC_RELEASE).pc + + EXTRA_DIST=autogen.sh README-MODES +- +-install-data-local: +- mkdir -p $(modesdir) +- $(INSTALL_DATA) README-MODES $(modesdir)/README diff --git a/sci-misc/apertium/files/3.2.0-flags.patch b/sci-misc/apertium/files/3.2.0-flags.patch new file mode 100644 index 000000000000..9bdc4a34c117 --- /dev/null +++ b/sci-misc/apertium/files/3.2.0-flags.patch @@ -0,0 +1,72 @@ +diff -Nur apertium-3.2.0.orig/configure.ac apertium-3.2.0/configure.ac +--- apertium-3.2.0.orig/configure.ac 2011-07-29 06:43:38.000000000 +0100 ++++ apertium-3.2.0/configure.ac 2011-07-29 06:46:26.000000000 +0100 +@@ -54,68 +54,6 @@ + + # Checks for programs. + +-AC_MSG_CHECKING([Compilation architecture: PPC, i686, x86_64, Other]) +-if test x$(which arch) = x +-then ARCH=$($(which uname) -m) +-else ARCH=$($(which arch)) +-fi +- +-case "${target_os}" in +- mingw*) +- MinGW=yes +- ;; +- cygwin*) +- Cygwin=yes +- ;; +-esac +- +-if test x$ARCH = xppc +-then +- AC_MSG_RESULT([PowerPC]) +- CFLAGS="$CFLAGS -Wall -ansi -fomit-frame-pointer" +- CXXFLAGS="$CXXFLAGS -Wall -ansi -fomit-frame-pointer" +-else +- if test x$MinGW = xyes +- then +- AC_MSG_RESULT([MinGW]) +- CFLAGS="$CFLAGS -Wall -march=i686 -O3 -DMINGW -fomit-frame-pointer \ +- -funroll-loops -I/include -L/lib" +- CXXFLAGS="$CXXFLAGS -Wall -march=i686 -O3 \ +- -fomit-frame-pointer -funroll-loops -I/include -L/lib" +- CPPFLAGS="$CPPFLAGS -I/include" +- else +- if test x$Cygwin = xyes +- then +- AC_MSG_RESULT([Cygwin]) +- CFLAGS="$CFLAGS -Wall -march=i686 -O3 -fomit-frame-pointer \ +- -funroll-loops" +- CXXFLAGS="$CXXFLAGS -Wall -march=i686 -O3 \ +- -fomit-frame-pointer -funroll-loops" +- CPPFLAGS="$CPPFLAGS" +- else +- if test x$ARCH = xi686 +- then +- AC_MSG_RESULT([i686]) +- CFLAGS="$CFLAGS -Wall -ansi -march=i686 -O3 -fomit-frame-pointer -funroll-loops" +- CXXFLAGS="$CXXFLAGS -Wall -ansi -march=i686 -O3 \ +- -fomit-frame-pointer -funroll-loops" +- else +- if test x$ARCH = xx86_64 +- then +- AC_MSG_RESULT([x86_64]) +- CFLAGS="-Wall -ansi -O3 -mtune=nocona -fomit-frame-pointer -funroll-loops $CFLAGS" +- CXXFLAGS="-Wall -ansi -O3 -mtune=nocona \ +- -fomit-frame-pointer -funroll-loops $CXXFLAGS" +- else +- AC_MSG_RESULT([Other]) +- CFLAGS="-Wall -ansi -O3 $CFLAGS" +- CXXFLAGS="-Wall -ansi -O3 $CXXFLAGS" +- fi +- fi +- fi +- fi +-fi +- + AC_PROG_CXX + AC_PROG_LIBTOOL + AM_SANITY_CHECK diff --git a/sci-misc/apertium/files/apertium-3.2.0-libpcre.patch b/sci-misc/apertium/files/apertium-3.2.0-libpcre.patch new file mode 100644 index 000000000000..29a6a5483bb8 --- /dev/null +++ b/sci-misc/apertium/files/apertium-3.2.0-libpcre.patch @@ -0,0 +1,43 @@ + configure.ac | 28 ++++++++++++++++------------ + 1 file changed, 16 insertions(+), 12 deletions(-) + +diff --git a/configure.ac b/configure.ac +index 0bfca01..2d8ec3b 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -183,19 +183,23 @@ AC_CHECK_FUNCS(strcasecmp) + + if test x$(uname) != xDarwin; + then +-AC_CHECK_HEADER(pcreposix.h, +- AC_CHECK_LIB(pcre, pcre_info,[ +- LIBS="$LIBS -lpcreposix -lpcre" +- no_comp_check=yes], +- AC_MSG_ERROR([*** unable to locate pcre library ***])), +- AC_MSG_ERROR([*** unable to locate pcreposix.h include file ***])) ++PKG_CHECK_MODULES([PCRE], ++ [libpcre libpcreposix libpcrecpp], ++ [LIBS="${LIBS} ${PCRE_LIBS}" no_comp_check=yes], [ ++ AC_CHECK_HEADER(pcreposix.h, ++ AC_CHECK_LIB(pcre, pcre_version,[ ++ LIBS="$LIBS -lpcreposix -lpcre" ++ no_comp_check=yes], ++ AC_MSG_ERROR([*** unable to locate pcre library ***])), ++ AC_MSG_ERROR([*** unable to locate pcreposix.h include file ***])) + +-AC_CHECK_HEADER(pcrecpp.h, +- AC_CHECK_LIB(pcrecpp,pcre_compile,[ +- LIBS="$LIBS -lpcrecpp" +- no_comp_check=yes], +- AC_MSG_ERROR([*** unable to locate pcrecpp library ***])), +- AC_MSG_ERROR([*** unable to locate pcrecpp.h include file ***])) ++ AC_CHECK_HEADER(pcrecpp.h, ++ AC_CHECK_LIB(pcrecpp,pcre_compile,[ ++ LIBS="$LIBS -lpcrecpp" ++ no_comp_check=yes], ++ AC_MSG_ERROR([*** unable to locate pcrecpp library ***])), ++ AC_MSG_ERROR([*** unable to locate pcrecpp.h include file ***])) ++ ]) + fi + + diff --git a/sci-misc/apertium/metadata.xml b/sci-misc/apertium/metadata.xml new file mode 100644 index 000000000000..4b8ef8827ae3 --- /dev/null +++ b/sci-misc/apertium/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci</herd> + <longdescription lang="en"> + Apertium is an open-source shallow-transfer machine translation + engine and toolbox. +</longdescription> + <upstream> + <remote-id type="sourceforge">apertium</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/boinc/Manifest b/sci-misc/boinc/Manifest new file mode 100644 index 000000000000..a064a6ba6649 --- /dev/null +++ b/sci-misc/boinc/Manifest @@ -0,0 +1,2 @@ +DIST boinc-7.2.0.tar.xz 25138432 SHA256 714ac3a10bec41afc224e8343f5bc221a488eefca4592dbc9ce4eea2c10cad5e SHA512 4ee360c14117cf4bbc26dfb48682462cdd15ca04b16f40b76562c0f5fa1a4531775762a1ce1f59960b4d0166a5d429af1279199f5140d3e112c72361ad01c46e WHIRLPOOL 3d41bf1f80d04aa9ec576da18bbb6a8078c98060bd6167dcf6a75fa34619fb95831695fb145a8f4400ec0d99a743f42539751667fcbc505fba7c747c0e0bedfd +DIST boinc-7.4.42.tar.gz 44075908 SHA256 2656727628cae8b15c39e48e08e0521aae345dd1cf4674c6730150500b30145f SHA512 6eabb130d38c55b551ce216afcb8b4a27d9755c4a20dfc30e7ab0c7e8ba5ab5af6995348ec5fee6b9711aa85f7fdbcef78b05894873d8780f20c9e29e17c8ad1 WHIRLPOOL 3b61de0a5a443d457ceda3c01bf824fa5d9a72c7e5d8e8da1bf35f1510a7d3fb72dbbf8ce329b2f8ca18c82afc16852df0cd047d4870b06537ddff473277d655 diff --git a/sci-misc/boinc/boinc-7.2.0-r1.ebuild b/sci-misc/boinc/boinc-7.2.0-r1.ebuild new file mode 100644 index 000000000000..8330ab3336d6 --- /dev/null +++ b/sci-misc/boinc/boinc-7.2.0-r1.ebuild @@ -0,0 +1,147 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +#WANT_AUTOMAKE="1.11" + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils flag-o-matic eutils wxwidgets user systemd + +DESCRIPTION="The Berkeley Open Infrastructure for Network Computing" +HOMEPAGE="http://boinc.ssl.berkeley.edu/" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +LICENSE="LGPL-2.1" +SLOT="0" +KEYWORDS="~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86" +IUSE="X cuda static-libs" + +RDEPEND=" + !sci-misc/boinc-bin + !app-admin/quickswitch + >=app-misc/ca-certificates-20080809 + dev-libs/openssl:0= + net-misc/curl[ssl,-gnutls(-),-nss(-),curl_ssl_openssl(+)] + sys-apps/util-linux + sys-libs/zlib + cuda? ( + >=dev-util/nvidia-cuda-toolkit-2.1 + >=x11-drivers/nvidia-drivers-180.22 + ) + X? ( + dev-db/sqlite:3 + media-libs/freeglut + sys-libs/glibc:2.2 + virtual/jpeg:0= + x11-libs/gtk+:2 + >=x11-libs/libnotify-0.7 + x11-libs/wxGTK:2.8[X,opengl] + ) +" +DEPEND="${RDEPEND} + sys-devel/gettext + app-text/docbook-xml-dtd:4.4 + app-text/docbook2X +" + +PATCHES=( + "${FILESDIR}"/${P}-fix_subdirs.patch +) + +AUTOTOOLS_IN_SOURCE_BUILD=1 + +src_prepare() { + # prevent bad changes in compile flags, bug 286701 + sed -i -e "s:BOINC_SET_COMPILE_FLAGS::" configure.ac || die "sed failed" + + autotools-utils_src_prepare +} + +src_configure() { + local wxconf="" + + # add gtk includes + append-flags "$(pkg-config --cflags gtk+-2.0)" + + # look for wxGTK + if use X; then + WX_GTK_VER="2.8" + need-wxwidgets unicode + wxconf+=" --with-wx-config=${WX_CONFIG}" + else + wxconf+=" --without-wxdir" + fi + + local myeconfargs=( + --disable-server + --enable-client + --enable-dynamic-client-linkage + --disable-static + --enable-unicode + --with-ssl + $(use_with X x) + $(use_enable X manager) + ${wxconf} + ) + autotools-utils_src_configure +} + +src_install() { + autotools-utils_src_install + + dodir /var/lib/${PN}/ + keepdir /var/lib/${PN}/ + + if use X; then + newicon "${S}"/packages/generic/sea/${PN}mgr.48x48.png ${PN}.png || die + make_desktop_entry boincmgr "${PN}" "${PN}" "Math;Science" "Path=/var/lib/${PN}" + fi + + # cleanup cruft + rm -rf "${ED}"/etc/ + + newinitd "${FILESDIR}"/${PN}.init ${PN} + newconfd "${FILESDIR}"/${PN}.conf ${PN} + systemd_dounit "${FILESDIR}"/${PN}.service +} + +pkg_preinst() { + enewgroup ${PN} + # note this works only for first install so we have to + # elog user about the need of being in video group + if use cuda; then + enewuser ${PN} -1 -1 /var/lib/${PN} "${PN},video" + else + enewuser ${PN} -1 -1 /var/lib/${PN} "${PN}" + fi +} + +pkg_postinst() { + echo + elog "You are using the source compiled version of ${PN}." + use X && elog "The graphical manager can be found at /usr/bin/${PN}mgr" + elog + elog "You need to attach to a project to do anything useful with ${PN}." + elog "You can do this by running /etc/init.d/${PN} attach" + elog "The howto for configuration is located at:" + elog "http://boinc.berkeley.edu/wiki/Anonymous_platform" + elog + # Add warning about the new password for the client, bug 121896. + if use X; then + elog "If you need to use the graphical manager the password is in:" + elog "/var/lib/${PN}/gui_rpc_auth.cfg" + elog "Where /var/lib/ is default RUNTIMEDIR, that can be changed in:" + elog "/etc/conf.d/${PN}" + elog "You should change this password to something more memorable (can be even blank)." + elog "Remember to launch init script before using manager. Or changing the password." + elog + fi + if use cuda; then + elog "To be able to use CUDA you should add boinc user to video group." + elog "Run as root:" + elog "gpasswd -a boinc video" + fi +} diff --git a/sci-misc/boinc/boinc-7.2.0.ebuild b/sci-misc/boinc/boinc-7.2.0.ebuild new file mode 100644 index 000000000000..c162cf1d311c --- /dev/null +++ b/sci-misc/boinc/boinc-7.2.0.ebuild @@ -0,0 +1,146 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +#WANT_AUTOMAKE="1.11" + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils flag-o-matic eutils wxwidgets user + +DESCRIPTION="The Berkeley Open Infrastructure for Network Computing" +HOMEPAGE="http://boinc.ssl.berkeley.edu/" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +LICENSE="LGPL-2.1" +SLOT="0" +KEYWORDS="~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86" +IUSE="X cuda static-libs" + +RDEPEND=" + !sci-misc/boinc-bin + !app-admin/quickswitch + >=app-misc/ca-certificates-20080809 + dev-libs/openssl:0= + net-misc/curl[ssl,-gnutls(-),-nss(-),curl_ssl_openssl(+)] + sys-apps/util-linux + sys-libs/zlib + cuda? ( + >=dev-util/nvidia-cuda-toolkit-2.1 + >=x11-drivers/nvidia-drivers-180.22 + ) + X? ( + dev-db/sqlite:3 + media-libs/freeglut + sys-libs/glibc:2.2 + virtual/jpeg:0= + x11-libs/gtk+:2 + >=x11-libs/libnotify-0.7 + x11-libs/wxGTK:2.8[X,opengl] + ) +" +DEPEND="${RDEPEND} + sys-devel/gettext + app-text/docbook-xml-dtd:4.4 + app-text/docbook2X +" + +PATCHES=( + "${FILESDIR}"/${P}-fix_subdirs.patch +) + +AUTOTOOLS_IN_SOURCE_BUILD=1 + +src_prepare() { + # prevent bad changes in compile flags, bug 286701 + sed -i -e "s:BOINC_SET_COMPILE_FLAGS::" configure.ac || die "sed failed" + + autotools-utils_src_prepare +} + +src_configure() { + local wxconf="" + + # add gtk includes + append-flags "$(pkg-config --cflags gtk+-2.0)" + + # look for wxGTK + if use X; then + WX_GTK_VER="2.8" + need-wxwidgets unicode + wxconf+=" --with-wx-config=${WX_CONFIG}" + else + wxconf+=" --without-wxdir" + fi + + local myeconfargs=( + --disable-server + --enable-client + --enable-dynamic-client-linkage + --disable-static + --enable-unicode + --with-ssl + $(use_with X x) + $(use_enable X manager) + ${wxconf} + ) + autotools-utils_src_configure +} + +src_install() { + autotools-utils_src_install + + dodir /var/lib/${PN}/ + keepdir /var/lib/${PN}/ + + if use X; then + newicon "${S}"/packages/generic/sea/${PN}mgr.48x48.png ${PN}.png || die + make_desktop_entry boincmgr "${PN}" "${PN}" "Math;Science" "Path=/var/lib/${PN}" + fi + + # cleanup cruft + rm -rf "${ED}"/etc/ + + newinitd "${FILESDIR}"/${PN}.init ${PN} + newconfd "${FILESDIR}"/${PN}.conf ${PN} +} + +pkg_preinst() { + enewgroup ${PN} + # note this works only for first install so we have to + # elog user about the need of being in video group + if use cuda; then + enewuser ${PN} -1 -1 /var/lib/${PN} "${PN},video" + else + enewuser ${PN} -1 -1 /var/lib/${PN} "${PN}" + fi +} + +pkg_postinst() { + echo + elog "You are using the source compiled version of ${PN}." + use X && elog "The graphical manager can be found at /usr/bin/${PN}mgr" + elog + elog "You need to attach to a project to do anything useful with ${PN}." + elog "You can do this by running /etc/init.d/${PN} attach" + elog "The howto for configuration is located at:" + elog "http://boinc.berkeley.edu/wiki/Anonymous_platform" + elog + # Add warning about the new password for the client, bug 121896. + if use X; then + elog "If you need to use the graphical manager the password is in:" + elog "/var/lib/${PN}/gui_rpc_auth.cfg" + elog "Where /var/lib/ is default RUNTIMEDIR, that can be changed in:" + elog "/etc/conf.d/${PN}" + elog "You should change this password to something more memorable (can be even blank)." + elog "Remember to launch init script before using manager. Or changing the password." + elog + fi + if use cuda; then + elog "To be able to use CUDA you should add boinc user to video group." + elog "Run as root:" + elog "gpasswd -a boinc video" + fi +} diff --git a/sci-misc/boinc/boinc-7.4.42.ebuild b/sci-misc/boinc/boinc-7.4.42.ebuild new file mode 100644 index 000000000000..2cfff07888ef --- /dev/null +++ b/sci-misc/boinc/boinc-7.4.42.ebuild @@ -0,0 +1,141 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +#WANT_AUTOMAKE="1.11" + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils eutils flag-o-matic systemd user versionator wxwidgets + +MY_PV=$(get_version_component_range 1-2) + +DESCRIPTION="The Berkeley Open Infrastructure for Network Computing" +HOMEPAGE="http://boinc.ssl.berkeley.edu/" +SRC_URI="https://github.com/BOINC/boinc/archive/client_release/${MY_PV}/${PV}.tar.gz -> ${P}.tar.gz" + +LICENSE="LGPL-2.1" +SLOT="0" +KEYWORDS="~amd64 ~ia64 ~ppc ~ppc64 ~sparc ~x86" +IUSE="X cuda static-libs" + +RDEPEND=" + !sci-misc/boinc-bin + !app-admin/quickswitch + >=app-misc/ca-certificates-20080809 + dev-libs/openssl:0= + net-misc/curl[ssl,-gnutls(-),-nss(-),curl_ssl_openssl(+)] + sys-apps/util-linux + sys-libs/zlib + cuda? ( + >=dev-util/nvidia-cuda-toolkit-2.1 + >=x11-drivers/nvidia-drivers-180.22 + ) + X? ( + dev-db/sqlite:3 + media-libs/freeglut + sys-libs/glibc:2.2 + virtual/jpeg:0= + x11-libs/gtk+:2 + >=x11-libs/libnotify-0.7 + x11-libs/wxGTK:2.8[X,opengl] + ) +" +DEPEND="${RDEPEND} + sys-devel/gettext + app-text/docbook-xml-dtd:4.4 + app-text/docbook2X +" + +S="${WORKDIR}/${PN}-client_release-${MY_PV}-${PV}" + +AUTOTOOLS_IN_SOURCE_BUILD=1 + +src_prepare() { + # prevent bad changes in compile flags, bug 286701 + sed -i -e "s:BOINC_SET_COMPILE_FLAGS::" configure.ac || die "sed failed" + + autotools-utils_src_prepare +} + +src_configure() { + local myeconfargs=( + --disable-server + --enable-client + --enable-dynamic-client-linkage + --disable-static + --enable-unicode + --with-ssl + $(use_with X x) + $(use_enable X manager) + ) + + # look for wxGTK + if use X; then + WX_GTK_VER="2.8" + need-wxwidgets unicode + myeconfargs+=(--with-wx-config="${WX_CONFIG}") + else + myeconfargs+=(--without-wxdir) + fi + + autotools-utils_src_configure +} + +src_install() { + autotools-utils_src_install + + keepdir /var/lib/${PN} + + if use X; then + newicon "${S}"/packages/generic/sea/${PN}mgr.48x48.png ${PN}.png + make_desktop_entry boincmgr "${PN}" "${PN}" "Math;Science" "Path=/var/lib/${PN}" + fi + + # cleanup cruft + rm -rf "${ED}"/etc + + newinitd "${FILESDIR}"/${PN}.init ${PN} + newconfd "${FILESDIR}"/${PN}.conf ${PN} + systemd_dounit "${FILESDIR}"/${PN}.service +} + +pkg_preinst() { + enewgroup ${PN} + # note this works only for first install so we have to + # elog user about the need of being in video group + local groups="${PN}" + if use cuda; then + group+=",video" + fi + enewuser ${PN} -1 -1 /var/lib/${PN} "${groups}" +} + +pkg_postinst() { + echo + elog "You are using the source compiled version of boinc." + use X && elog "The graphical manager can be found at /usr/bin/boincmgr" + elog + elog "You need to attach to a project to do anything useful with boinc." + elog "You can do this by running /etc/init.d/boinc attach" + elog "The howto for configuration is located at:" + elog "http://boinc.berkeley.edu/wiki/Anonymous_platform" + elog + # Add warning about the new password for the client, bug 121896. + if use X; then + elog "If you need to use the graphical manager the password is in:" + elog "/var/lib/boinc/gui_rpc_auth.cfg" + elog "Where /var/lib/ is default RUNTIMEDIR, that can be changed in:" + elog "/etc/conf.d/boinc" + elog "You should change this password to something more memorable (can be even blank)." + elog "Remember to launch init script before using manager. Or changing the password." + elog + fi + if use cuda; then + elog "To be able to use CUDA you should add boinc user to video group." + elog "Run as root:" + elog "gpasswd -a boinc video" + fi +} diff --git a/sci-misc/boinc/files/boinc-7.2.0-fix_subdirs.patch b/sci-misc/boinc/files/boinc-7.2.0-fix_subdirs.patch new file mode 100644 index 000000000000..be0a02c30cfd --- /dev/null +++ b/sci-misc/boinc/files/boinc-7.2.0-fix_subdirs.patch @@ -0,0 +1,69 @@ + Makefile.am | 14 +++++++------- + configure.ac | 5 ----- + 2 files changed, 7 insertions(+), 12 deletions(-) + +diff --git a/Makefile.am b/Makefile.am +index 6322db1..45d8b67 100644 +--- a/Makefile.am ++++ b/Makefile.am +@@ -10,13 +10,13 @@ ACLOCAL_AMFLAGS = -I m4 + + if ENABLE_LIBRARIES + API_SUBDIRS = api lib +-if ENABLE_SERVER +- API_SUBDIRS += zip +-endif ++#if ENABLE_SERVER ++# API_SUBDIRS += zip ++#endif + endif + + if ENABLE_SERVER +- SERVER_SUBDIRS = db test py sched apps tools vda html ++ SERVER_SUBDIRS = db test py sched apps tools vda + ## once contained samples/example_app which breaks out-of-source-tree builds + endif + +@@ -26,9 +26,9 @@ endif + + if ENABLE_MANAGER + CLIENTGUI_SUBDIRS = clientgui locale +-if BUILD_X11_SCREENSAVER +- CLIENTGUI_SUBDIRS += clientscr +-endif ++#if BUILD_X11_SCREENSAVER ++# CLIENTGUI_SUBDIRS += clientscr ++#endif + endif + + # ORDER MATTERS below. One must build dependencies FIRST, then things +diff --git a/configure.ac b/configure.ac +index 2bef437..5a9e104 100644 +--- a/configure.ac ++++ b/configure.ac +@@ -955,7 +955,6 @@ AC_CONFIG_FILES([ + apps/Makefile + clientgui/Makefile + clientgui/res/Makefile +- clientscr/Makefile + client/Makefile + client/win/boinc_path_config.py:py/boinc_path_config.py.in + client/scripts/Makefile +@@ -963,7 +962,6 @@ AC_CONFIG_FILES([ + db/Makefile + doc/Makefile + doc/manpages/Makefile +- html/Makefile + lib/Makefile + locale/Makefile + Makefile +@@ -993,9 +991,6 @@ AC_CONFIG_FILES([ + tools/boinc_path_config.py:py/boinc_path_config.py.in + tools/Makefile + vda/Makefile +- zip/Makefile +- zip/zip/Makefile +- zip/unzip/Makefile + m4/Makefile + ]) + diff --git a/sci-misc/boinc/files/boinc.conf b/sci-misc/boinc/files/boinc.conf new file mode 100644 index 000000000000..0fef6ae58e37 --- /dev/null +++ b/sci-misc/boinc/files/boinc.conf @@ -0,0 +1,17 @@ +# Config file for /etc/init.d/boinc + +# Owner of BOINC process (must be existing) +USER="boinc" +GROUP="boinc" + +# Directory with runtime data: Work units, project binaries, user info etc. +RUNTIMEDIR="/var/lib/boinc" + +# Location of the boinc command line binary +BOINCBIN="/usr/bin/boinc_client" + +# Allow remote gui RPC yes or no +ALLOW_REMOTE_RPC="no" + +# nice level +NICELEVEL="19" diff --git a/sci-misc/boinc/files/boinc.init b/sci-misc/boinc/files/boinc.init new file mode 100644 index 000000000000..a350e3efd7c4 --- /dev/null +++ b/sci-misc/boinc/files/boinc.init @@ -0,0 +1,103 @@ +#!/sbin/runscript + +extra_started_commands="attach" + +depend() { + # we can use dns and net, but we can also in most cases live without them + use dns net ntp-client ntpd +} + +create_work_directory() { + if [ ! -d "${RUNTIMEDIR}" ]; then + einfo "Directory ${RUNTIMEDIR} not existing, creating now." + mkdir "${RUNTIMEDIR}" + if [ ! -d "${RUNTIMEDIR}" ]; then + eeror "Directory ${RUNTIMEDIR} could not be created!" + return 1 + fi + fi + if [ ! -e "${RUNTIMEDIR}"/ca-bundle.crt ] ; then + ln -s /etc/ssl/certs/ca-certificates.crt "${RUNTIMEDIR}"/ca-bundle.crt + fi +} + +cuda_check() { + if [ -f /opt/cuda/lib/libcudart.so ]; then + # symlink wont harm :] + ln -snf /opt/cuda/lib/libcudart.so "${RUNTIMEDIR}"/libcudart.so + fi +} + +check_baselayout() { + if [ "${RC_VERSION:-0}" = "0" ]; then + eerror "This script cannot be used for baselayout-1." + return 1 + fi +} + +start() { + check_baselayout || return 1 + create_work_directory || return 1 + cuda_check + + # always ensure proper ownership + chown -R "${USER}:${GROUP}" "${RUNTIMEDIR}" + + if [ ! -f "${RUNTIMEDIR}/lockfile" ]; then + einfo "File \"${RUNTIMEDIR}/lockfile\" does not exist, assuming first run." + einfo "You need to setup an account on the BOINC project homepage beforehand!" + einfo "Go to http://boinc.berkeley.edu/ and locate your project." + einfo "Then either run /etc/init.d/boinc attach or connect with a gui client" + einfo "and attach to a project with that." + echo + ewarn "Note that for attaching to some project you need your network up and running." + ewarn "network is needed only for jobs fetching afterwards" + fi + + if [ "${ALLOW_REMOTE_RPC}" = "yes" ]; then + ARGS="${ARGS} --allow_remote_gui_rpc" + fi + + ebegin "Starting ${SVCNAME}" + su -m ${USER} -c "nice -n ${NICELEVEL} \"${BOINCBIN}\" ${ARGS} --daemon --dir \"${RUNTIMEDIR}\" --redirectio" + eend $? +} + +attach() { + local password url key + + einfo "If you cant find your account key just try to obtain it by using:" + einfo " boinccmd --passwd PASSWORD_FROM_GUI_RPC_AUTH --lookup_account URL EMAIL PASSWORD" + + printf " Enter the Project URL: " + read url + printf " Enter your Account Key: " + read key + + if ! service_started; then + "${RC_SERVICE}" start + fi + + password=$(cat "${RUNTIMEDIR}/gui_rpc_auth.cfg") + + ebegin "${SVCNAME}: Attaching to project" + su -m ${USER} -c "boinccmd --passwd \"${password}\" --project_attach ${url} ${key}" + eend $? + + unset password url key + + sleep 10 + tail "${RUNTIMEDIR}/stdoutdae.txt" +} + +stop() { + local password + + password=$(cat "${RUNTIMEDIR}/gui_rpc_auth.cfg") + + ebegin "Stopping ${SVCNAME}" + su -m ${USER} -c "boinccmd --passwd \"${password}\" --quit" + eend $? + + unset password +} diff --git a/sci-misc/boinc/files/boinc.service b/sci-misc/boinc/files/boinc.service new file mode 100644 index 000000000000..af8edf4d5041 --- /dev/null +++ b/sci-misc/boinc/files/boinc.service @@ -0,0 +1,11 @@ +[Unit] +Description=BOINC Daemon + +[Service] +User=boinc +Group=boinc +Nice=19 +ExecStart=/usr/bin/boinc_client --dir /var/lib/boinc --redirectio + +[Install] +WantedBy=multi-user.target diff --git a/sci-misc/boinc/files/generate_tarball.sh b/sci-misc/boinc/files/generate_tarball.sh new file mode 100644 index 000000000000..eb98b46c39ff --- /dev/null +++ b/sci-misc/boinc/files/generate_tarball.sh @@ -0,0 +1,103 @@ +#!/usr/bin/env bash +## $Id$ +## Modified by scarabeus 2008-10-23 +############################################################################### +# functions +############################################################################### +# print out help function +help() { + echo "Welcome to Boinc tarball generator" + echo + echo "For correct usage set VERSION argument" + echo "Example:" + echo "$0 -v 6.1.1" + exit 0 +} +############################################################################### +# argument passing +############################################################################### +if [[ $1 == "--help" ]]; then + help +fi +while getopts v: arg ; do + case $arg in + v) VERSION=${OPTARG};; + *) help;; + esac +done +if [ -z "${VERSION}" ]; then + help +fi +############################################################################### +# variable definition +############################################################################### +GIT_URI="git://boinc.berkeley.edu/boinc-v2.git" +PACKAGE="boinc-${VERSION}" +BUNDLE_PREFIX="boinc-dist" +LOG=linux.log +############################################################################### +# prepare enviroment +############################################################################### +mkdir ${BUNDLE_PREFIX} -p +rm -rf "${BUNDLE_PREFIX}"/* # CLEANUP +cd "${BUNDLE_PREFIX}" +touch "${LOG}" +echo "" > "${LOG}" # LOG CLEANUP +############################################################################### +# get data from GIT +############################################################################### +echo "<Downloading files from GIT repository>" +echo "<******************************>" +# No direct archive possible +git clone ${GIT_URI} ${PACKAGE} >> "${LOG}" +pushd "${PACKAGE}" > /dev/null +git checkout -b gentoo client_release/${VERSION%.*}/${VERSION} || exit 0 +popd > /dev/null +############################################################################### +# cleanup files we fetched +############################################################################### +echo "<Cleaning up data we fetched>" +echo "<******************************>" +pushd "${PACKAGE}" > /dev/null + +# First remove NON Linux stuff we will not use +rm -rf mac_installer/ # mac installer scripts +rm -rf clientgui/mac/ # mac windows +rm -rf clientscr/ # windows screensaver +rm -rf clienttray/ # windows systray +rm -rf win_build/ # windows build stuff +rm -rf clientlib/ # only windows stuff +rm -rf client/os2/ # OS2 stuff +rm -rf client/win/ # windows stuff +rm -rf mac_build/ # mac build scripts +rm -rf RSAEuro/ # empty folder +rm -rf html/ # webpages WTF? + + +# BUNDLED STUFF NEEDED REMOVAL +rm -rf coprocs/ # CUDA +rm -rf curl/ +#rm -rf locale/*/*.mo # translations should be generated on user machines +# Actualy they dont generate them +rm -rf zlib/ +rm -rf zip/ +rm -rf openssl/ + +git commit -a -m "Cleaned" + +popd > /dev/null + +############################################################################### +# create tbz +############################################################################### +git archive --prefix=${PACKAGE}/ --remote=${PACKAGE} gentoo -o ${PACKAGE}.tar +xz -ve9 "${PACKAGE}".tar | tee -a "${LOG}" +find ./ -maxdepth 1 -type f -name \*.tar.xz -print | while read FILE ; do + echo "FILE: ${FILE}" + echo " SIZE: $(`which du` -h ${FILE} |`which awk` -F' ' '{print $1}')" + echo " MD5SUM: $(`which md5sum` ${FILE} |`which awk` -F' ' '{print $1}')" + echo " SHA1SUM: $(`which sha1sum` ${FILE} |`which awk` -F' ' '{print $1}')" + echo +done +echo "<<<All done>>>" +############################################################################### diff --git a/sci-misc/boinc/metadata.xml b/sci-misc/boinc/metadata.xml new file mode 100644 index 000000000000..587dfa1190b9 --- /dev/null +++ b/sci-misc/boinc/metadata.xml @@ -0,0 +1,19 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci</herd> + <longdescription lang="en"> + BOINC (Berkeley Open Infrastructure for Network Computing) is a software + platform for distributed computing using volunteered computer resources. +</longdescription> + <use> + <flag name="cuda"> + Use nvidia cuda toolkit for speeding up computations. + NOTE: works only for subset of nvidia graphic cards so make sure your card + is supported before opening bug about it. + </flag> + </use> + <upstream> + <remote-id type="github">BOINC/boinc</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/fitsverify/Manifest b/sci-misc/fitsverify/Manifest new file mode 100644 index 000000000000..7d301ae7dc6a --- /dev/null +++ b/sci-misc/fitsverify/Manifest @@ -0,0 +1 @@ +DIST fitsverify-4.17.tar.gz 42634 SHA256 1ffb76e285715477ac3d7de3cc5ce96e74c3cd81f9b3d840327dda39d0598c3b SHA512 0d15b8e4ae5098126bed2bb2dfaa47ac20d977ed707352dc7930ebaf23a7a20cc69458fd77f9e76888e2ec4ef8a2a2f180c2fe03b9b7a4c9299aeea6df831879 WHIRLPOOL f666800c32603027ea07dff975d104b525643e13bc7920bf6056d8ff2f5c0dc1701a4a7d870e5c0a64ca1399f199b3d542ffcbed6a6a280202d193c615305b0f diff --git a/sci-misc/fitsverify/fitsverify-4.17.ebuild b/sci-misc/fitsverify/fitsverify-4.17.ebuild new file mode 100644 index 000000000000..5b82bfe0c38e --- /dev/null +++ b/sci-misc/fitsverify/fitsverify-4.17.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 +inherit toolchain-funcs + +DESCRIPTION="FITS file format checker" +HOMEPAGE="http://heasarc.gsfc.nasa.gov/docs/software/ftools/fitsverify/" +SRC_URI="${HOMEPAGE}/${P}.tar.gz" + +LICENSE="public-domain" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +RDEPEND=">=sci-libs/cfitsio-3:0=" +DEPEND="${RDEPEND} + virtual/pkgconfig" + +S="${WORKDIR}/${PN}" + +src_compile() { + $(tc-getCC) -DSTANDALONE ${CFLAGS} ${LDFLAGS} \ + $($(tc-getPKG_CONFIG) --cflags cfitsio) \ + ftverify.c fvrf*.c \ + $($(tc-getPKG_CONFIG) --libs cfitsio) -o ${PN} \ + || die "compiled failed" +} + +src_install() { + dobin fitsverify + dodoc README +} diff --git a/sci-misc/fitsverify/metadata.xml b/sci-misc/fitsverify/metadata.xml new file mode 100644 index 000000000000..0398d6d922a2 --- /dev/null +++ b/sci-misc/fitsverify/metadata.xml @@ -0,0 +1,10 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<longdescription lang='en'> + fitsverify is a computer program that rigorously checks whether a + FITS format data file conforms to all the requirements defined in + the FITS (Flexible Image Transport System) standard document. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/flashdot/Manifest b/sci-misc/flashdot/Manifest new file mode 100644 index 000000000000..d43318fdf446 --- /dev/null +++ b/sci-misc/flashdot/Manifest @@ -0,0 +1 @@ +DIST flashdot-1.1.4.tar.bz2 464763 RMD160 16f0118a964d553c26bb04d1f5ce6c61f0712b3b SHA1 76d0a83c4dfd3d7410a27b0f673319e82e0af6ae SHA256 b43c05d2933c1381cfd5a0761250ce68ad0a138a150679df0bf7b80564c93439 diff --git a/sci-misc/flashdot/flashdot-1.1.4.ebuild b/sci-misc/flashdot/flashdot-1.1.4.ebuild new file mode 100644 index 000000000000..2711ac0dc461 --- /dev/null +++ b/sci-misc/flashdot/flashdot-1.1.4.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=2 + +DESCRIPTION="Generator for psychophysical experiments" +HOMEPAGE="http://www.flashdot.info/" +SRC_URI="mirror://gentoo/${P}.tar.bz2 + http://dev.gentoo.org/~tomka/files/${P}.tar.bz2" + +LICENSE="GPL-2" +KEYWORDS="~amd64 ~x86" +SLOT="0" + +IUSE="+ocamlopt" + +DEPEND=">=dev-lang/ocaml-3.10[ocamlopt?] + dev-ml/ocamlsdl + dev-ml/ocamlgsl + dev-ml/lablgl[glut] + x11-apps/xdpyinfo" +RDEPEND="${DEPEND}" + +MAKEOPTS="-j1 VERSION=${PV}" +use ocamlopt || MAKEOPTS="${MAKEOPTS} TARGETS=flashdot_bytecode BYTECODENAME=flashdot" + +src_compile() { + emake ${MAKEOPTS} || die "emake failed" +} + +src_install() { + emake ${MAKEOPTS} DESTDIR="${D}" CALLMODE=script install || die "install failed" +} diff --git a/sci-misc/flashdot/metadata.xml b/sci-misc/flashdot/metadata.xml new file mode 100644 index 000000000000..8f23be731dae --- /dev/null +++ b/sci-misc/flashdot/metadata.xml @@ -0,0 +1,13 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<maintainer> +<email>tomka@gentoo.org</email> +<name>Thomas Kahle</name> +</maintainer> +<herd>sci</herd> +<longdescription lang="en"> +FlashDot is a program for generating and presenting visual perceptual experiments that require a high temporal +precision. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/gato/Manifest b/sci-misc/gato/Manifest new file mode 100644 index 000000000000..430af62adae2 --- /dev/null +++ b/sci-misc/gato/Manifest @@ -0,0 +1 @@ +DIST Gato-1.1.2.tar.gz 272060 SHA256 eb700c73cc411be70713d34a936da62fca9c0173f875dba636e726e47dbfcadd SHA512 a0567bc3ddb6060b713f3453f6a89d978da580c97ab28f094b90e82cfc584ba1cd459add0c5f2d32e746fc074ac78b2f3394d752a7bbdf14c8ccdd90b25e5008 WHIRLPOOL 024df3365c169a93cf2850ed571ad04a5e732f0bd3e535bd401881236acf8538aa673ba5dbc6bfa8b40dddab5737de1b863ea2d2029807631114be59c526c550 diff --git a/sci-misc/gato/gato-1.1.2.ebuild b/sci-misc/gato/gato-1.1.2.ebuild new file mode 100644 index 000000000000..89d4077712ef --- /dev/null +++ b/sci-misc/gato/gato-1.1.2.ebuild @@ -0,0 +1,52 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +PYTHON_DEPEND="2" +PYTHON_USE_WITH="tk" + +inherit eutils python + +MYP="Gato-${PV}" + +DESCRIPTION="Graph Animation Toolbox" +HOMEPAGE="http://gato.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${MYP}.tar.gz" + +LICENSE="LGPL-2" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="" + +S="${WORKDIR}/${MYP}" + +pkg_setup() { + python_set_active_version 2 + python_pkg_setup +} + +src_prepare() { + # change TKinter call to avoid crashing of X + sed -i \ + -e 's:self.overrideredirect(1):self.overrideredirect(0):' \ + "${S}"/GatoDialogs.py || die "failed to patch GatoDialogs.py" +} + +src_install() { + # install python code + local instdir=$(python_get_sitedir)/${PN} + insinto ${instdir} + doins *.py + fperms 755 ${instdir}/{Gato,Gred}.py + python_convert_shebangs -r 2 "${ED}" + + # create symlinks + dosym ${instdir}/Gato.py /usr/bin/gato + dosym ${instdir}/Gred.py /usr/bin/gred + + # install data files + insinto /usr/share/${PN} + doins BFS.* DFS.* sample.cat +} diff --git a/sci-misc/gato/metadata.xml b/sci-misc/gato/metadata.xml new file mode 100644 index 000000000000..bc70ae41110c --- /dev/null +++ b/sci-misc/gato/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-mathematics</herd> + <longdescription lang="en"> + Gato - the Graph Animation Toolbox - is a software which visualizes + algorithms on mathematical graphs. +</longdescription> + <upstream> + <remote-id type="sourceforge">gato</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/gt-itm/Manifest b/sci-misc/gt-itm/Manifest new file mode 100644 index 000000000000..daf4db55dd8b --- /dev/null +++ b/sci-misc/gt-itm/Manifest @@ -0,0 +1,2 @@ +DIST gt-itm.tar.gz 623345 SHA256 0719947bb6e3a82d0054b6d4c74f5b3615c5583d326c32e11a848dcfed861538 SHA512 e775ac475d40fc753a27fb619f262d701818190fa3be90d587f95e215610918b56b9d67783d4e7e2f55d0064e5b2d2ce911042353b29bce1e4dbcf407ff9fabc WHIRLPOOL c447323fe98b7bef85d5fda86cfa3b559208694519be17ead0d5792dc8b27349a1c2b0bbde4d8a571f609c1c1a66b33b30888165215d332e64ee28b748328bab +DIST sgb2ns.tar.gz 50635 SHA256 902f1a3d1a57e87387dd3bd22b8fda7c1ee2830f87fa468ab775aa8feb2a22cb SHA512 77ec6fdad61f43bf078851852aa03dfea02df235a78853e477dacc8e2b94c0d8bda9772fc00d18fdaeabc419b2780c016b7a64a1a06ac0be2c8c2aa6608c06cf WHIRLPOOL ae6a0d2701c0a98eb7b059acc8760acc444ca086b4eb60e46cce4df1491012c9b1853cb1acc35c709938103a94f005c379c5bad9630b4a464af7460a3b9e3bfb diff --git a/sci-misc/gt-itm/files/gt-itm-implicits.patch b/sci-misc/gt-itm/files/gt-itm-implicits.patch new file mode 100644 index 000000000000..7618354469ff --- /dev/null +++ b/sci-misc/gt-itm/files/gt-itm-implicits.patch @@ -0,0 +1,111 @@ +--- gt-itm/src/geog.c ++++ gt-itm/src/geog.c +@@ -6,6 +6,7 @@ + */ + + #include <stdio.h> ++#include <stdlib.h> + #include <sys/param.h> /* for NBBY */ + #include <alloca.h> + #include <assert.h> +@@ -31,6 +32,9 @@ + + static char geogId[]="$Id$"; + ++long fdiam(Graph *g); ++void die(s); ++ + double + distance(Vertex *u, Vertex *v) + { +--- gt-itm/src/ts.c ++++ gt-itm/src/ts.c +@@ -8,6 +8,7 @@ + */ + + #include <stdio.h> ++#include <stdlib.h> + #include <sys/types.h> /* for NBBY */ + #include <alloca.h> + #include "gb_graph.h" +@@ -64,6 +65,10 @@ + return (x); } + */ + ++int td_OK(Vertex *snp,Vertex *dnp); ++long random(void); ++int stubs_OK(Vertex *snp0,Vertex *snp1); ++ + /* fast diameter computation using Floyd-Warshall + * Returns the HOP diameter of the graph, i.e. each edge given UNIT wt. + * Leaves the LENGTH diameter of the graph in g->Gldiam. +--- gt-itm/include/geog.h ++++ gt-itm/include/geog.h +@@ -74,3 +74,8 @@ + geo_parms* toppp, /* params for transit connectivity */ + geo_parms* transpp, /* " " transit domains */ + geo_parms* stubpp); /* " " stub domains */ ++ ++void randomize(long* a, long size, long mean, int iters); ++long idist(Vertex *u, Vertex *v); ++int printparms(char *buf,geo_parms *pp); ++int isconnected(Graph *G); +--- gt-itm/src/edriver.c ++++ gt-itm/src/edriver.c +@@ -35,6 +35,8 @@ + */ + + #include <stdio.h> ++#include <stdlib.h> ++#include <string.h> + #include "gb_graph.h" + #include "gb_save.h" + #include "gb_dijk.h" +--- gt-itm/include/eval.h ++++ gt-itm/include/eval.h +@@ -8,4 +8,7 @@ + enum Field {Len, A, B, Hops}; + + void twofield_sptree(Graph*, Vertex*, enum Field, enum Field); +- ++int finddegdist(Graph *g, int** degdist); ++void dopaths(Graph *g, enum Field f0, enum Field f1, int *rmin, int *rmax, float *ravg); ++void dodepthdist(Graph *g, int** ddist); ++int bicomp(Graph *g,int verbose); +--- gt-itm/src/dfs.c ++++ gt-itm/src/dfs.c +@@ -6,6 +6,7 @@ + */ + + #include <stdio.h> ++#include <stdlib.h> + #include <alloca.h> + #include <sys/types.h> + #include "gb_graph.h" +@@ -18,6 +19,8 @@ + + #define NBBY 8 + ++int dfs(Graph *G,int n,u_char *vis); ++ + /* check connectivity of graph g */ + /* uses depth-first search. */ + isconnected(Graph *G) +--- gt-itm/src/itm.c.orig 2010-10-12 17:11:25.748461793 +0200 ++++ gt-itm/src/itm.c 2010-10-12 17:13:09.237165705 +0200 +@@ -42,6 +42,7 @@ + #include <stdlib.h> /* for calloc(),atoi(),etc. */ + #include <string.h> /* for strtok() */ + #include "gb_graph.h" ++#include "gb_save.h" + #include "geog.h" + + #define LINE 512 +@@ -55,6 +56,7 @@ + char *delim = " \t\n", *nonestr = "<none>"; + static char errstr[256]; + ++void die(s); + + char * + get_geoparms(FILE * f, geo_parms * pp) diff --git a/sci-misc/gt-itm/gt-itm-19961004-r1.ebuild b/sci-misc/gt-itm/gt-itm-19961004-r1.ebuild new file mode 100644 index 000000000000..56b2fb092197 --- /dev/null +++ b/sci-misc/gt-itm/gt-itm-19961004-r1.ebuild @@ -0,0 +1,75 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +inherit eutils toolchain-funcs + +DESCRIPTION="Routines to generate and analyze graphs using different models for internetwork topology" +HOMEPAGE="http://www.cc.gatech.edu/fac/Ellen.Zegura/graphs.html + http://www.isi.edu/nsnam/ns/ns-topogen.html#gt-itm" +SRC_URI="http://www.cc.gatech.edu/fac/Ellen.Zegura/gt-itm/gt-itm.tar.gz + http://www.isi.edu/nsnam/dist/sgb2ns.tar.gz" + +LICENSE="all-rights-reserved sgb2ns" +SLOT="0" +KEYWORDS="~x86 ~amd64" +RESTRICT="mirror bindist" + +DEPEND="dev-util/sgb" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/${PN}" +S2="${WORKDIR}/sgb2ns" + +src_unpack() { + unpack sgb2ns.tar.gz + + mkdir "${S}" + cd "${S}" + unpack gt-itm.tar.gz + + sed -r -e '/^[[:alnum:]]+\.o:/d' \ + -e 's|LIBS = -lm -lgb.*|LIBS = -lm -lgb|' \ + -e 's/\$\(CC\)/& \$\(LDFLAGS\)/g' \ + -i "${S}"/src/Makefile || die + sed -r -e '/^SYS = -DSYSV/d' \ + -e 's|LIBS = -lm -lgb.*|LIBS = -lm -lgb|' \ + -e 's/\$\(CC\)/& \$\(LDFLAGS\)/g' \ + -i ${S2}/Makefile || die + + rm -f "${S}"/lib/* + + find "${S}"/sample-graphs/ -perm +111 -type f -name 'Run*' \ + | xargs -r -n1 sed -re 's|(\.\./)+bin/||g' -i || die + + sed -e 's|sys/types.h|sys/param.h|' -i "${S}"/src/geog.c || die + sed -e '162 s/connected $/connected \\/' -i "${S}"/src/eval.c || die + + # fix implicit function declarations + sed -e '/stdio.h/ a\#include <stdlib.h>' \ + -i "${S2}/sgb2comns.c" "${S2}/sgb2hierns.c" || die + sed -e "s/<strings.h>/<string.h>/g" \ + -i "${S2}/sgb2hierns.c" || die + epatch "${FILESDIR}"/${PN}-implicits.patch +} + +src_compile() { + cd "${S}"/src + emake CFLAGS="${CFLAGS} -I../include" LDFLAGS="${LDFLAGS}" \ + CC="$(tc-getCC)" || die + + cd "${S2}" + emake CFLAGS="${CFLAGS} -I\$(IDIR) -L\$(LDIR)" LDFLAGS="${LDFLAGS}" \ + CC="$(tc-getCC)" || die +} + +src_install() { + dobin "${S}"/bin/* || die + dodoc "${S}"/README "${S}"/docs/* || die + cp -pPR "${S}"/sample-graphs "${D}"/usr/share/doc/${PF} || die + + cd "${S2}" + dodoc *.tcl *.gb || die + newdoc README README.sgb2ns || die + +} diff --git a/sci-misc/gt-itm/metadata.xml b/sci-misc/gt-itm/metadata.xml new file mode 100644 index 000000000000..b229aec85b8f --- /dev/null +++ b/sci-misc/gt-itm/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +</pkgmetadata> diff --git a/sci-misc/h5utils/Manifest b/sci-misc/h5utils/Manifest new file mode 100644 index 000000000000..e19bb57225ab --- /dev/null +++ b/sci-misc/h5utils/Manifest @@ -0,0 +1 @@ +DIST h5utils-1.12.1.tar.gz 156785 SHA256 7290290ca5d5d4451d757a70c86baaa70d23a28edb09c951b6b77c22b924a38d SHA512 b4295ac52ddfe922ed9f0a9079c69d6fdba5a261558d8c820a8feae592db3bd57a3394ab1fc9ceead00038a80bc70f32e0a8aa437cb33182899553bfdbf1f547 WHIRLPOOL c717c41545533eb0ba9f7d4813c42e3fbbec3ef292f8461ead0f0dcbe4e7530d64740dffb94cf25e839420ac4633082c06833ea5013a1a9eb276ef516d632f14 diff --git a/sci-misc/h5utils/files/h5utils-1.12.1-automagic.patch b/sci-misc/h5utils/files/h5utils-1.12.1-automagic.patch new file mode 100644 index 000000000000..8de8580cfe38 --- /dev/null +++ b/sci-misc/h5utils/files/h5utils-1.12.1-automagic.patch @@ -0,0 +1,63 @@ +--- configure.ac ++++ configure.ac +@@ -74,44 +74,23 @@ + + ########################################################################### + +-# Only build h5fromh4 if we are using a version of HDF5 prior to 1.4, and +-# thus don't have the superior h4toh5 utility. Similarly for h5toh4. +-AC_CHECK_PROG(H4TOH5, h4toh5, h4toh5) +-AC_CHECK_PROG(H5TOH4, h5toh4, h5toh4) +- +-AC_ARG_WITH(hdf4, +- [AC_HELP_STRING([--with-hdf4], [build hdf4 utils even if h4toh5 and h5toh4 are present])], +- ok=$withval, ok=maybe) +-if test "x$ok" = xyes; then +- H4TOH5="" +- H5TOH4="" +-elif test "x$ok" = xno; then +- H4TOH5="h4toh5" +- H5TOH4="h5toh4" +-fi +- +-HDF4=no +-if test "x$H4TOH5" != xh4toh5 -o "x$H5TOH4" != xh5toh4; then +- AC_CHECK_LIB(jpeg, jpeg_start_compress, +- [AC_CHECK_LIB(df, DFSDgetdata, +- [H4_LIBS="-ldf -ljpeg"; HDF4=yes], +- [AC_MSG_WARN([can't find libdf (HDF4): won't be able to compile h5fromh4 or h4fromh5])], -ljpeg)], +- [AC_MSG_WARN([can't find libjpeg: won't be able to compile h5fromh4 or h4fromh5])]) +- +- if test $HDF4 = yes; then +- if test "x$H4TOH5" != xh4toh5; then +- MORE_H5UTILS="h5fromh4\$(EXEEXT) $MORE_H5UTILS" +- MORE_H5UTILS_MANS="h5fromh4.1 $MORE_H5UTILS_MANS" +- fi +- if test "x$H5TOH4" != xh5toh4; then +- MORE_H5UTILS="h4fromh5\$(EXEEXT) $MORE_H5UTILS" +- # MORE_H5UTILS_MANS="h4fromh5.1 $MORE_H5UTILS_MANS" +- fi +- fi +-fi +-AC_CHECK_HEADERS(hdf.h hdf/hdf.h) ++AC_ARG_WITH([hdf], AS_HELP_STRING([--with-hdf], [build hdf4 utils even if h4toh5 and h5toh4 are present])) + +-AC_SUBST(H4_LIBS) ++AS_IF([test "x$with_hdf" = "xyes"], [ ++ AC_CHECK_HEADERS(hdf.h hdf/hdf.h) ++ AC_CHECK_LIB(jpeg, jpeg_start_compress, ++ [AC_CHECK_LIB(df, DFSDgetdata, ++ [H4_LIBS="-ldf -ljpeg"; HDF4=yes], ++ [AC_MSG_WARN([can't find libdf (HDF4): won't be able to compile h5fromh4 or h4fromh5])], -ljpeg)], ++ [AC_MSG_WARN([can't find libjpeg: won't be able to compile h5fromh4 or h4fromh5])]) ++ if test $HDF4 = yes; then ++ MORE_H5UTILS="h5fromh4\$(EXEEXT) $MORE_H5UTILS" ++ MORE_H5UTILS_MANS="h5fromh4.1 $MORE_H5UTILS_MANS" ++ MORE_H5UTILS="h4fromh5\$(EXEEXT) $MORE_H5UTILS" ++ fi ++ ++ AC_SUBST(H4_LIBS) ++]) + + ########################################################################### + diff --git a/sci-misc/h5utils/files/h5utils-1.12.1-png15.patch b/sci-misc/h5utils/files/h5utils-1.12.1-png15.patch new file mode 100644 index 000000000000..e611310145eb --- /dev/null +++ b/sci-misc/h5utils/files/h5utils-1.12.1-png15.patch @@ -0,0 +1,43 @@ +Fix build with png-1.5. + +https://bugs.gentoo.org/show_bug.cgi?id=378919 + +Patch stolen from NetBSD +--- writepng.c ++++ writepng.c +@@ -240,6 +240,8 @@ void writepng(char *filename, + double skewsin = sin(skew), skewcos = cos(skew); + REAL minoverlay = 0, maxoverlay = 0; + png_byte mask_byte; ++ png_colorp palette = NULL; ++ + + /* we must use direct color for translucent overlays */ + if (overlay) +@@ -309,7 +311,7 @@ void writepng(char *filename, + } + /* Set error handling. REQUIRED if you aren't supplying your own * + * error hadnling functions in the png_create_write_struct() call. */ +- if (setjmp(png_ptr->jmpbuf)) { ++ if (setjmp(png_jmpbuf(png_ptr))) { + /* If we get here, we had a problem reading the file */ + fclose(fp); + png_destroy_write_struct(&png_ptr, (png_infopp) NULL); +@@ -334,8 +336,6 @@ void writepng(char *filename, + PNG_INTERLACE_NONE, + PNG_COMPRESSION_TYPE_BASE, PNG_FILTER_TYPE_BASE); + else { +- png_colorp palette; +- + png_set_IHDR(png_ptr, info_ptr, width, height, 8 /* bit_depth */ , + PNG_COLOR_TYPE_PALETTE, + PNG_INTERLACE_NONE, +@@ -434,7 +434,7 @@ void writepng(char *filename, + png_write_end(png_ptr, info_ptr); + + /* if you malloced the palette, free it here */ +- free(info_ptr->palette); ++ free(palette); + + /* if you allocated any text comments, free them here */ + diff --git a/sci-misc/h5utils/h5utils-1.12.1-r2.ebuild b/sci-misc/h5utils/h5utils-1.12.1-r2.ebuild new file mode 100644 index 000000000000..80ddd86d1730 --- /dev/null +++ b/sci-misc/h5utils/h5utils-1.12.1-r2.ebuild @@ -0,0 +1,42 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils + +DESCRIPTION="Utilities for visualization and conversion of HDF5 files" +HOMEPAGE="http://ab-initio.mit.edu/h5utils/" +SRC_URI="http://ab-initio.mit.edu/h5utils/${P}.tar.gz" + +SLOT="0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~ppc x86 ~amd64-linux ~x86-linux" +IUSE="hdf octave" + +DEPEND=" + media-libs/libpng:0= + sci-libs/hdf5:0= + sys-libs/zlib:0= + hdf? ( + sci-libs/hdf:0= + virtual/jpeg + )" +RDEPEND="${DEPEND}" + +PATCHES=( + "${FILESDIR}"/${P}-automagic.patch + "${FILESDIR}"/${P}-png15.patch +) + +src_configure() { + local myeconfargs=( + --without-v5d + $(use_with octave) + $(use_with hdf) + ) + autotools-utils_src_configure +} diff --git a/sci-misc/h5utils/metadata.xml b/sci-misc/h5utils/metadata.xml new file mode 100644 index 000000000000..3b1e1069c1a3 --- /dev/null +++ b/sci-misc/h5utils/metadata.xml @@ -0,0 +1,17 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<longdescription> + h5utils is a set of utilities for visualization and conversion of + scientific data in the free, portable HDF5 format. + Besides providing a simple tool for batch visualization as PNG images, + h5utils also includes programs to convert HDF5 datasets into the + formats required by other free visualization software (e.g. plain + text, Vis5d, and VTK). +</longdescription> +<use> + <flag name="octave">Build Octave plugins</flag> + <flag name="hdf">Build hdf to hdf5 (and vice-versa) converter</flag> +</use> +</pkgmetadata> diff --git a/sci-misc/lttoolbox/Manifest b/sci-misc/lttoolbox/Manifest new file mode 100644 index 000000000000..202ceded63de --- /dev/null +++ b/sci-misc/lttoolbox/Manifest @@ -0,0 +1,2 @@ +DIST lttoolbox-3.1.0.tar.gz 375031 SHA256 17ceeac6a2a2c0afdeded8f79594145b9964e78bc2ab8eb49bf2a35f63c80fb4 +DIST lttoolbox-3.2.0.tar.gz 372484 SHA256 1359291173ae4af6cbaa625f5ab63ad288b91f72ed0555b2a676e3dfe9b4c1fc diff --git a/sci-misc/lttoolbox/files/3.2.0-flags.patch b/sci-misc/lttoolbox/files/3.2.0-flags.patch new file mode 100644 index 000000000000..a6a56bf42c0d --- /dev/null +++ b/sci-misc/lttoolbox/files/3.2.0-flags.patch @@ -0,0 +1,43 @@ +diff -Nur lttoolbox-3.2.0.orig/configure.ac lttoolbox-3.2.0/configure.ac +--- lttoolbox-3.2.0.orig/configure.ac 2011-07-29 06:36:44.000000000 +0100 ++++ lttoolbox-3.2.0/configure.ac 2011-07-29 06:38:04.000000000 +0100 +@@ -51,39 +51,6 @@ + + # Checks for programs. + +-AC_MSG_CHECKING([Compilation architecture: PPC, i686, x86_64, Other]) +-if test x$(which arch) = x +-then ARCH=$($(which uname) -m) +-else ARCH=$($(which arch)) +-fi +- +-if test x$ARCH = xppc +-then +- AC_MSG_RESULT([PowerPC]) +- CFLAGS="-Wall -fomit-frame-pointer $CFLAGS" +- CXXFLAGS="-Wall -fomit-frame-pointer $CXXFLAGS" +-else +- if test x$ARCH = xi686 +- then +- AC_MSG_RESULT([i686]) +- CFLAGS="-Wall -march=i686 -O3 -fomit-frame-pointer -funroll-loops $CFLAGS" +- CXXFLAGS="-Wall -march=i686 -O3 \ +- -fomit-frame-pointer -funroll-loops $CXXFLAGS" +- +- else +- if test x$ARCH = xx86_64 +- then +- AC_MSG_RESULT([x86_64]) +- CFLAGS="-Wall -O3 -mtune=nocona -fomit-frame-pointer -funroll-loops $CFLAGS" +- CXXFLAGS="-Wall -O3 -mtune=nocona \ +- -fomit-frame-pointer -funroll-loops $CXXFLAGS" +- else +- AC_MSG_RESULT([Other]) +- CFLAGS="-Wall -O3 $CFLAGS" +- CXXFLAGS="-Wall -O3 $CXXFLAGS" +- fi +- fi +-fi + + AC_CANONICAL_HOST + diff --git a/sci-misc/lttoolbox/lttoolbox-3.1.0.ebuild b/sci-misc/lttoolbox/lttoolbox-3.1.0.ebuild new file mode 100644 index 000000000000..70b1cccd0b1e --- /dev/null +++ b/sci-misc/lttoolbox/lttoolbox-3.1.0.ebuild @@ -0,0 +1,20 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +DESCRIPTION="Toolbox for lexical processing, morphological analysis and generation of words" +HOMEPAGE="http://apertium.sourceforge.net" +SRC_URI="mirror://sourceforge/apertium/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="dev-libs/libxml2:2 + dev-libs/libxslt + dev-libs/libpcre + sys-libs/libunwind" +RDEPEND="${DEPEND}" diff --git a/sci-misc/lttoolbox/lttoolbox-3.2.0.ebuild b/sci-misc/lttoolbox/lttoolbox-3.2.0.ebuild new file mode 100644 index 000000000000..23dc5750b317 --- /dev/null +++ b/sci-misc/lttoolbox/lttoolbox-3.2.0.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 +inherit eutils autotools + +DESCRIPTION="Toolbox for lexical processing, morphological analysis and generation of words" +HOMEPAGE="http://apertium.sourceforge.net" +SRC_URI="mirror://sourceforge/apertium/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="static-libs" + +RDEPEND="dev-libs/libxml2:2" +DEPEND="${RDEPEND} + virtual/pkgconfig" + +src_prepare() { + epatch "${FILESDIR}"/${PV}-flags.patch + eautoreconf +} + +src_configure() { + econf $(use_enable static-libs static) +} diff --git a/sci-misc/lttoolbox/metadata.xml b/sci-misc/lttoolbox/metadata.xml new file mode 100644 index 000000000000..052d44463a30 --- /dev/null +++ b/sci-misc/lttoolbox/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci</herd> + <longdescription lang="en"> + lttoolbox is a toolbox for lexical processing, morphological analysis and + generation of words +</longdescription> + <upstream> + <remote-id type="sourceforge">apertium</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/mendeleydesktop/Manifest b/sci-misc/mendeleydesktop/Manifest new file mode 100644 index 000000000000..7c21798ffafb --- /dev/null +++ b/sci-misc/mendeleydesktop/Manifest @@ -0,0 +1,2 @@ +DIST mendeleydesktop-1.14-linux-i486.tar.bz2 33111869 SHA256 42c789b265545ccd8056668111cc6e7a09850491f2719e30170936f4e0940d6c SHA512 57e4f2e2af9644e6170755c008dea715cc206880425dd5fd9bb18052cdec769b1cab5e2226725e7614f29cce8e42039f2e394db81495de371a4ffa11ea967d0f WHIRLPOOL 5e0772618348715a48ab43563c55f96d8bba5a99db07d29b4dca86e711e4ce2a0dcabd90270f9384879a70c78a55f58b70c18c77658919e292f77d107f2050be +DIST mendeleydesktop-1.14-linux-x86_64.tar.bz2 32843455 SHA256 bfab457fe2a896539059bc301fc1daf15b0b03180b21ea083a0929ffbc699d70 SHA512 690477edd15d9f48d7bb5b87fe42b07cc187b9ab9c307836980af00a0e409bbbf5ce5980b9bdc039a466c4389ef17ed37c9fd3e8fb5deb535bf9e5d2f4c8ac85 WHIRLPOOL defb4e19889c17074447d11a2e75b6a96ead68140bea290629ed095ebcc5e966bf5c5dd1204908c731f3532ea6ba97794cc435a75365493e014aa36d0cc6e4ff diff --git a/sci-misc/mendeleydesktop/mendeleydesktop-1.14.ebuild b/sci-misc/mendeleydesktop/mendeleydesktop-1.14.ebuild new file mode 100644 index 000000000000..34b00514635e --- /dev/null +++ b/sci-misc/mendeleydesktop/mendeleydesktop-1.14.ebuild @@ -0,0 +1,122 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +PYTHON_COMPAT=( python{2_7,3_3,3_4} ) + +inherit eutils fdo-mime multilib python-single-r1 + +MY_P_AMD64="${P}-linux-x86_64" +MY_P_X86="${P}-linux-i486" + +DESCRIPTION="Research management tool for desktop and web" +HOMEPAGE="http://www.mendeley.com/" +SRC_URI=" + amd64? ( ${MY_P_AMD64}.tar.bz2 ) + x86? ( ${MY_P_X86}.tar.bz2 ) + amd64-linux? ( ${MY_P_AMD64}.tar.bz2 ) + x86-linux? ( ${MY_P_X86}.tar.bz2 )" + +LICENSE="Mendeley-terms" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +REQUIRED_USE="${PYTHON_REQUIRED_USE}" + +RESTRICT="fetch" + +DEPEND="" +RDEPEND="${PYTHON_DEPS} + dev-qt/qtcore:4 + dev-qt/qtgui:4 + dev-qt/qtsvg:4 + dev-qt/qtwebkit:4 + dev-qt/qtxmlpatterns:4 + x11-libs/libX11 + " + +QA_PREBUILT="/opt/mendeleydesktop/.*" + +pkg_nofetch() { + elog "Please download ${A} from:" + elog "http://www.mendeley.com/download-mendeley-desktop/" + elog "and move it to ${DISTDIR}" +} + +src_unpack() { + unpack ${A} + + cd "${WORKDIR}" || die + + if use amd64 || use amd64-linux ; then + mv -f "${MY_P_AMD64}" "${P}" || die + else + mv -f "${MY_P_X86}" "${P}" || die + fi +} + +src_prepare() { + # remove bundled Qt libraries + rm -r lib/mendeleydesktop/plugins \ + || die "failed to remove plugin directory" + rm -r lib/qt || die "failed to remove qt libraries" + + # force use of system Qt libraries + sed -i "s:sys\.argv\.count(\"--force-system-qt\") > 0:True:" \ + bin/mendeleydesktop || die "failed to patch startup script" + + # fix library paths + sed -i \ + -e "s:lib/mendeleydesktop:$(get_libdir)/mendeleydesktop:g" \ + -e "s:MENDELEY_BASE_PATH + \"/lib/\":MENDELEY_BASE_PATH + \"/$(get_libdir)/\":g" \ + bin/mendeleydesktop || die "failed to patch library path" +} + +src_install() { + # install menu + domenu share/applications/${PN}.desktop + + # install application icons + insinto /usr/share/icons + doins -r share/icons/hicolor + + # install default icon + insinto /usr/share/pixmaps + doins share/icons/hicolor/48x48/apps/${PN}.png + + # install documentation, but no license file + dodoc share/doc/${PN}/Readme.txt + + # install binary + python_fix_shebang bin/${PN} + into /opt/${PN} + dobin bin/* + + # install libraries + dolib.so lib/lib*.so* + + # install programs + exeinto /opt/mendeleydesktop/$(get_libdir)/mendeleydesktop/libexec + doexe lib/mendeleydesktop/libexec/* + + # install shared files + insinto /opt/${PN}/share + doins -r share/mendeleydesktop + + # install launch script + into /opt + make_wrapper ${PN} "/opt/${PN}/bin/${PN} --unix-distro-build" +} + +pkg_postinst() { + fdo-mime_desktop_database_update + fdo-mime_mime_database_update +} + +pkg_postrm() { + fdo-mime_desktop_database_update + fdo-mime_mime_database_update +} diff --git a/sci-misc/mendeleydesktop/metadata.xml b/sci-misc/mendeleydesktop/metadata.xml new file mode 100644 index 000000000000..b896b3ebe0a0 --- /dev/null +++ b/sci-misc/mendeleydesktop/metadata.xml @@ -0,0 +1,26 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>miknix@gentoo.org</email> + <name>Angelo Arrifano</name> + </maintainer> + <maintainer> + <email>xmw@gentoo.org</email> + <name>Michael Weber</name> + </maintainer> + <maintainer> + <email>marbre@linux.sungazer.de</email> + <name>Marius Brehler</name> + </maintainer> + <maintainer> + <email>jlec@gentoo.org</email> + <name>Justin Lecher</name> + <description>proxy for Marius</description> + </maintainer> + <longdescription> +Mendeley(TM) is a free reference manager and academic social network that can +help you organize your research, collaborate with others online, and discover +the latest research. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/metadata.xml b/sci-misc/metadata.xml new file mode 100644 index 000000000000..79b7decbf496 --- /dev/null +++ b/sci-misc/metadata.xml @@ -0,0 +1,42 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE catmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<catmetadata> + <longdescription lang="en"> + The sci-misc category contains various miscellaneous science + applications which do not fit any other sci-* category. + </longdescription> + <longdescription lang="de"> + Die Kategorie sci-misc enthält verschiedene wissenschaftliche + Anwendungen, welche in keine der anderen sci-* Kategorien + hineinpassen. + </longdescription> + <longdescription lang="es"> + La categoría sci-misc contiene varias aplicaciones relacionadas con la + ciencia que no encajan en las otras categorías sci-*. + </longdescription> + <longdescription lang="ja"> + sci-miscカテゴリーには他のsci-カテゴリーに分類されない + 多種多様なサイエンス・アプリケーションが含まれています。 + </longdescription> + <longdescription lang="nl"> + De sci-misc categorie bevat pakketten die niet in een andere + sci-* categorie passen. + </longdescription> + <longdescription lang="vi"> + Nhóm sci-misc chứa các phần mềm khoa học không thích hợp + trong các nhóm sci- khác. + </longdescription> + <longdescription lang="it"> + La categoria sci-misc contiene varie applicazioni scientifiche + che non sono classificabili nelle altre categorie sci-. + </longdescription> + <longdescription lang="pt"> + A categoria sci-misc contém várias aplicações científicas mistas + que não se encaixam nas outras categorias sci-*. + </longdescription> + <longdescription lang="pl"> + Kategoria sci-misc zawiera różne dodatkowe pakiety, które nie pasowały + do innych kategorii sci-*. + </longdescription> +</catmetadata> + diff --git a/sci-misc/nco/Manifest b/sci-misc/nco/Manifest new file mode 100644 index 000000000000..bba7070e57d9 --- /dev/null +++ b/sci-misc/nco/Manifest @@ -0,0 +1,3 @@ +DIST nco-3.9.9.tar.gz 4109201 SHA256 cdfd7cf47aef49b32e4e581bc7d2d6cdd05312ed88a2a0cfaf83c520e665b142 +DIST nco-4.4.2.tar.gz 7801937 SHA256 6b2f48ac4618ba50306885a6358925956c2b178dee6348ada3195a3fc2a425d8 SHA512 b624174bdb4d10b6f4e05024c0e4f06f642ebeb9bdb291e7dbf07b858522cdb7f2385d63ba70cab36aef40fc42d6d229a1c3bfacd85747f516cbbd45748ae185 WHIRLPOOL ca5d974ac10a0211d5cb4d0daab1501d7e13429530ef480c070af2f70e46630a3b49213b1370b17be0f829b9d73a437a3d44d4bc750b0c54f55a56402b3e7ec7 +DIST nco-4.5.1.tar.gz 4406757 SHA256 c9a34b1f649635093e219604479b0aa4fd2d400aaee4328577443642ed2920ae SHA512 69c19cc9502272adada329dae669fc1c263a360789963253315e81ce1534647b9172b39a0fd3c0f0f453bf903c8a8a4b0e3f0eb778390e43b64eede3a0478485 WHIRLPOOL 868fc67f0bb5c43f8b00a1479de428d0b2e9bdfed75ed4983baf05dee266d6750e43ead70a1bef16d693f2f47bc343c16a1fdd0cf77cabb36595fd8043a7844d diff --git a/sci-misc/nco/metadata.xml b/sci-misc/nco/metadata.xml new file mode 100644 index 000000000000..4f8a54def83b --- /dev/null +++ b/sci-misc/nco/metadata.xml @@ -0,0 +1,20 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci</herd> + <longdescription lang="en"> + Command-line operators to analyze netCDF files + NetCDF Operator is a suite of programs known as operators. The + operators are stand-alone, command-line programs executable in a POSIX + shell. Operators take one or more netCDF files as input, perform an + operation (e.g., averaging or hyperslabbing), and produce a netCDF + output file. NCO was originally designed to manipulate and analyze + climate data, though it works on any netCDF format datasets. +</longdescription> + <use> + <flag name="dap">Support for remote data access with the NETCDF DAP client</flag> + <flag name="ncap2">Build next generation netcdf arithmetic processor + (needs <pkg>dev-java/antlr</pkg>)</flag> + <flag name="udunits">Add <pkg>sci-libs/udunits</pkg> files support</flag> + </use> +</pkgmetadata> diff --git a/sci-misc/nco/nco-3.9.9.ebuild b/sci-misc/nco/nco-3.9.9.ebuild new file mode 100644 index 000000000000..2daf4381746b --- /dev/null +++ b/sci-misc/nco/nco-3.9.9.ebuild @@ -0,0 +1,71 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=2 +inherit eutils flag-o-matic + +DESCRIPTION="Command line utilities for operating on netCDF files" +SRC_URI="http://dust.ess.uci.edu/nco/src/${P}.tar.gz" +HOMEPAGE="http://nco.sourceforge.net/" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="amd64 ppc x86" + +IUSE="doc mpi ncap2 udunits" + +RDEPEND="sci-libs/netcdf + mpi? ( virtual/mpi ) + udunits? ( >=sci-libs/udunits-2 )" + +DEPEND="${RDEPEND} + ncap2? ( !mpi? ( dev-java/antlr:0 ) ) + doc? ( virtual/latex-base )" + +pkg_setup() { + if use mpi && use ncap2; then + elog + elog "mpi and ncap2 are still incompatible flags" + elog "nco configure will automatically disables ncap2" + elog + fi +} + +src_configure() { + local myconf + if has_version ">=sci-libs/netcdf-4" && built_with_use sci-libs/netcdf hdf5; then + append-cppflags -DHAVE_NETCDF4_H + myconf="--enable-netcdf4" + else + myconf="--disable-netcdf4" + fi + econf \ + ${myconf} \ + --disable-udunits \ + $(use_enable ncap2) \ + $(use_enable udunits udunits2) \ + $(use_enable mpi) +} + +src_compile() { + emake || die "emake failed" + cd doc + emake clean info + if use doc; then + VARTEXFONTS="${T}/fonts" emake html pdf || die "emake doc failed" + fi +} + +src_install() { + emake DESTDIR="${D}" install || die "emake install failed" + cd doc + dodoc ANNOUNCE ChangeLog MANIFEST NEWS README TAG TODO VERSION *.txt \ + || die "dodoc failed" + doinfo *.info* || die "doinfo failed" + if use doc; then + dohtml nco.html/* || die "dohtml failed" + insinto /usr/share/doc/${PF} + doins nco.pdf || die "pdf install failed" + fi +} diff --git a/sci-misc/nco/nco-4.4.2.ebuild b/sci-misc/nco/nco-4.4.2.ebuild new file mode 100644 index 000000000000..9fcd4d695cae --- /dev/null +++ b/sci-misc/nco/nco-4.4.2.ebuild @@ -0,0 +1,51 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_IN_SOURCE_BUILD=1 +inherit autotools-utils eutils flag-o-matic + +DESCRIPTION="Command line utilities for operating on netCDF files" +HOMEPAGE="http://nco.sourceforge.net/" +SRC_URI="http://nco.sf.net/src/${P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0/${PV}" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" + +IUSE="dap doc gsl ncap2 static-libs test udunits" + +RDEPEND=" + >=sci-libs/netcdf-4:=[dap=,tools] + gsl? ( sci-libs/gsl:= ) + udunits? ( >=sci-libs/udunits-2 )" + +DEPEND="${RDEPEND} + ncap2? ( dev-java/antlr:0 ) + test? ( >=sci-libs/netcdf-4[tools] )" + +src_configure() { + local myeconfargs=( + --disable-udunits + $(use_enable dap dap-netcdf) + $(use_enable gsl) + $(use_enable ncap2) + $(use_enable udunits udunits2) + ) + if has_version '>=sci-libs/netcdf-4[hdf5]'; then + myeconfargs+=( --enable-netcdf4 ) + append-cppflags -DHAVE_NETCDF4_H + else + myeconfargs+=( --disable-netcdf4 ) + fi + autotools-utils_src_configure +} + +src_install() { + autotools-utils_src_install + cd doc + doinfo *.info* + use doc && dohtml nco.html && dodoc nco.pdf +} diff --git a/sci-misc/nco/nco-4.5.1.ebuild b/sci-misc/nco/nco-4.5.1.ebuild new file mode 100644 index 000000000000..599f5f550754 --- /dev/null +++ b/sci-misc/nco/nco-4.5.1.ebuild @@ -0,0 +1,50 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_IN_SOURCE_BUILD=1 +inherit autotools-utils eutils flag-o-matic + +DESCRIPTION="Command line utilities for operating on netCDF files" +HOMEPAGE="http://nco.sourceforge.net/" +SRC_URI="http://nco.sf.net/src/${P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0/${PV}" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="dap doc gsl ncap2 openmp static-libs test udunits" + +RDEPEND=" + >=sci-libs/netcdf-4:=[dap=,tools] + gsl? ( sci-libs/gsl:= ) + udunits? ( >=sci-libs/udunits-2 )" + +DEPEND="${RDEPEND} + ncap2? ( dev-java/antlr:0 ) + test? ( >=sci-libs/netcdf-4[tools] )" + +src_configure() { + local myeconfargs=( + --disable-udunits + $(use_enable dap dap-netcdf) + $(use_enable gsl) + $(use_enable ncap2) + $(use_enable openmp) + $(use_enable udunits udunits2) + ) + if has_version '>=sci-libs/netcdf-4[hdf5]'; then + myeconfargs+=( --enable-netcdf4 ) + append-cppflags -DHAVE_NETCDF4_H + else + myeconfargs+=( --disable-netcdf4 ) + fi + autotools-utils_src_configure +} + +src_install() { + use doc && DOCS=( doc/nco.pdf ) && HTML_DOCS=( doc/nco.html ) + autotools-utils_src_install + doinfo doc/*.info* +} diff --git a/sci-misc/ncview/Manifest b/sci-misc/ncview/Manifest new file mode 100644 index 000000000000..1452600da0e2 --- /dev/null +++ b/sci-misc/ncview/Manifest @@ -0,0 +1,2 @@ +DIST ncview-2.1.1.tar.gz 1232134 SHA256 8aaf98fad15790313739520b88e17748617be504f0a2b0322a62144e390db1dd SHA512 3cb8156670b2f6e6028df028641b3d6f0909fe0a9fd255f3189c5937c9fd2bd7fb2ac0c2be17aa74c6a8e7b7a67e6e1ac6e5691fe2e01091ce9b0b221890e992 WHIRLPOOL 84fdcd04fce130b4bff216d750b3d369bbdec55300402361c4a6041ebe223382a9633a288ae81400a39be3dd5451e56cddc5640e4f78e3ef928959bb9824a9e0 +DIST ncview-2.1.2.tar.gz 1269929 SHA256 099165e85d5aa15c3091e856b1003de768db75f5824a364cbe6bab6698244f4e SHA512 8146be3b20870a3dbbf44e8e1c51a18f36bcc60827a969f15606ba7ae068f1e4598fc2004612f84e17cffec1960f6683ee56f15b91e46eb82db173f7b7baa1dc WHIRLPOOL cd75101e5bcb2d15ddd0088cc726bc0efcf2182b1deb58f894cc98aad2ed2b05c105fa683cb2b552da124f9089c2b8bbfc179a75916959fc0a05b9977e7464ca diff --git a/sci-misc/ncview/metadata.xml b/sci-misc/ncview/metadata.xml new file mode 100644 index 000000000000..a4c406ecfd48 --- /dev/null +++ b/sci-misc/ncview/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<longdescription lang="en"> + Ncview is a visual browser for netCDF format files. Typically you + would use ncview to get a quick push-button look at your netCDF + files. You can view movies of the data, view along various + dimensions, take a look at the actual data values, change color + maps, invert the data, etc. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/ncview/ncview-2.1.1.ebuild b/sci-misc/ncview/ncview-2.1.1.ebuild new file mode 100644 index 000000000000..56deb16554ad --- /dev/null +++ b/sci-misc/ncview/ncview-2.1.1.ebuild @@ -0,0 +1,32 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +inherit eutils + +DESCRIPTION="X-based viewer for netCDF files" +HOMEPAGE="http://meteora.ucsd.edu/~pierce/ncview_home_page.html" +SRC_URI="ftp://cirrus.ucsd.edu/pub/ncview/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" + +DEPEND="media-libs/libpng + >=sci-libs/netcdf-4.1[hdf5] + x11-libs/libXaw + sci-libs/udunits" +RDEPEND="${DEPEND}" + +src_install() { + default + doman data/${PN}.1 + insinto /usr/share/X11/app-defaults + newins Ncview-appdefaults Ncview + insinto /usr/share/${PN} + doins *.ncmap + make_desktop_entry ${PN} +} diff --git a/sci-misc/ncview/ncview-2.1.2.ebuild b/sci-misc/ncview/ncview-2.1.2.ebuild new file mode 100644 index 000000000000..be78dfe0e9af --- /dev/null +++ b/sci-misc/ncview/ncview-2.1.2.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +inherit eutils + +DESCRIPTION="X-based viewer for netCDF files" +HOMEPAGE="http://meteora.ucsd.edu/~pierce/ncview_home_page.html" +SRC_URI="ftp://cirrus.ucsd.edu/pub/ncview/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" + +DEPEND=" + media-libs/libpng + >=sci-libs/netcdf-4.1[hdf5] + x11-libs/libXaw + sci-libs/udunits" +RDEPEND="${DEPEND}" + +src_install() { + default + doman data/${PN}.1 + insinto /usr/share/X11/app-defaults + newins Ncview-appdefaults Ncview + insinto /usr/share/${PN} + doins *.ncmap + make_desktop_entry ${PN} +} diff --git a/sci-misc/netlogo-bin/Manifest b/sci-misc/netlogo-bin/Manifest new file mode 100644 index 000000000000..d066112fd39e --- /dev/null +++ b/sci-misc/netlogo-bin/Manifest @@ -0,0 +1,4 @@ +DIST netlogo-3.0.2.tar.gz 21541643 SHA256 4644a232da98f7784e0bc78a6d0c7c5f9f614f11902926786c98de76ac1c7958 +DIST netlogo-4.0.4.tar.gz 36488145 SHA256 678b66951cdd1b4768c464d9a37278251708da8d4c0049bacdc573df4d7dd537 SHA512 9f6e8d1a9abd61f6e2d60b78a8bf9c5cf02646ae437078c5332f538137f61ad94ba6d6490f0ea4b35f66de71e4e5fceb8bef7cee2578dd334f5efec9d9b6f64a WHIRLPOOL 6ad98f980b2341213b99e77452a10da8c06ff598fab6dce5e28dfefa321d7ceca05869a81d729487fd3e4fbe5703965546321ee6a8b95b0955f988e9b58f9345 +DIST netlogo-5.0.3.tar.gz 66725456 SHA256 cfc39c81c5bce4d2713338886484787ec3d9e417971d29dd21e115c74a5ecdac SHA512 39d660d5dbd7e74f072621a74bfc18648ed208b833b3d442f2a9dbefc673065c4a7bf0e4a8ebb670b4d4220ee7bec452cc97f32731a28ca2eb56656bea795b81 WHIRLPOOL 54fb9d78b8d4ed60295dec58fb39db4a89fb4ee9b8c428c268aae13b4cdbbaca19094f875b7d6450ffb2da3c2c193e9ed16d827d1c7dc872eba7d2bda1269e0f +DIST netlogo.gif.tar 10240 SHA256 4c5412875d0b24a9b62e723ff0ae02f82211f7ce9827c47eb1dc75055217d726 SHA512 9a9bc81660599d2b35875f301d5b9824bfa2dafa21dc96b1e6e281d4682ab7b4052844a961b46f5300131c91a4562c58e4b1a4d753cb2b24a18e64b42d333e32 WHIRLPOOL 73bccd302fc18161cd1b9fecff3c60937904148948ba31705b06f60321a261f0ae44cc38c3d56a94669a0bd10ab7c71584345e4f6898b83f73f077be37fd4e63 diff --git a/sci-misc/netlogo-bin/files/hubnet.sh b/sci-misc/netlogo-bin/files/hubnet.sh new file mode 100644 index 000000000000..65b833e50aa9 --- /dev/null +++ b/sci-misc/netlogo-bin/files/hubnet.sh @@ -0,0 +1,4 @@ +#!/bin/bash +NETLOGO_INSTALL_PATH="/usr/share/netlogo-bin" +cd ${NETLOGO_INSTALL_PATH} +java -classpath $(java-config -p netlogo-bin) org.nlogo.hubnet.client.App diff --git a/sci-misc/netlogo-bin/files/netlogo-3d.sh b/sci-misc/netlogo-bin/files/netlogo-3d.sh new file mode 100644 index 000000000000..cdf52a61e25a --- /dev/null +++ b/sci-misc/netlogo-bin/files/netlogo-3d.sh @@ -0,0 +1,4 @@ +#!/bin/bash +NETLOGO_INSTALL_PATH="/usr/share/netlogo-bin" +cd ${NETLOGO_INSTALL_PATH} +java -classpath $(java-config -p netlogo-bin) -Dorg.nlogo.is3d=true -jar NetLogo.jar diff --git a/sci-misc/netlogo-bin/files/netlogo-5.0.3.sh b/sci-misc/netlogo-bin/files/netlogo-5.0.3.sh new file mode 100644 index 000000000000..8bc82fa8d8a1 --- /dev/null +++ b/sci-misc/netlogo-bin/files/netlogo-5.0.3.sh @@ -0,0 +1,4 @@ +#!/bin/bash +NETLOGO_INSTALL_PATH="/usr/share/netlogo-bin" +cd ${NETLOGO_INSTALL_PATH} +java -classpath $(java-config -p netlogo-bin) -jar NetLogo.jar diff --git a/sci-misc/netlogo-bin/files/netlogo.sh b/sci-misc/netlogo-bin/files/netlogo.sh new file mode 100644 index 000000000000..edc0f0af5ea1 --- /dev/null +++ b/sci-misc/netlogo-bin/files/netlogo.sh @@ -0,0 +1,4 @@ +#!/bin/bash +NETLOGO_INSTALL_PATH="/usr/share/netlogo-bin" +cd ${NETLOGO_INSTALL_PATH} +java -classpath $(java-config -p netlogo-bin) org.nlogo.app.App diff --git a/sci-misc/netlogo-bin/metadata.xml b/sci-misc/netlogo-bin/metadata.xml new file mode 100644 index 000000000000..ce9bb4b678b3 --- /dev/null +++ b/sci-misc/netlogo-bin/metadata.xml @@ -0,0 +1,16 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>creffett@gentoo.org</email> + </maintainer> + <longdescription> +NetLogo is a programmable modeling environment for simulating natural and +social phenomena. It is particularly well suited for modeling complex +systems developing over time. Modelers can give instructions to hundreds +or thousands of independent "agents" all operating concurrently. This makes +it possible to explore the connection between the micro-level behavior of +individuals and the macro-level patterns that emerge from the interaction +of many individuals. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/netlogo-bin/netlogo-bin-3.0.2.ebuild b/sci-misc/netlogo-bin/netlogo-bin-3.0.2.ebuild new file mode 100644 index 000000000000..fb59be9e4a95 --- /dev/null +++ b/sci-misc/netlogo-bin/netlogo-bin-3.0.2.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +inherit eutils java-pkg-2 + +MY_PN="netlogo" +MY_P=${MY_PN}-${PV} + +DESCRIPTION="Cross-platform multi-agent programmable modeling environment" +HOMEPAGE="http://ccl.northwestern.edu/netlogo/" +SRC_URI=" + http://dev.gentoo.org/~jlec/distfiles/${PN/-bin}.gif.tar + http://ccl.northwestern.edu/netlogo/${PV}/${MY_P}.tar.gz" + +LICENSE="netlogo" +SLOT="0" +KEYWORDS="amd64 x86" +IUSE="" + +DEPEND=" + app-arch/unzip + >=virtual/jdk-1.4" +RDEPEND=">=virtual/jre-1.4" + +S="${WORKDIR}"/${MY_P} + +src_install() { + java-pkg_dojar *.jar + java-pkg_dojar extensions/*.jar + java-pkg_dojar lib/*.jar + + dohtml -r docs/* + insinto /usr/share/${PN}/models + doins -r models/* + + insinto /usr/share/pixmaps + doins "${WORKDIR}"/netlogo.gif + + exeinto /opt/bin + newexe "${FILESDIR}"/netlogo.sh netlogo + + make_desktop_entry netlogo "NetLogo" /usr/share/pixmaps/netlogo.gif +} diff --git a/sci-misc/netlogo-bin/netlogo-bin-4.0.4.ebuild b/sci-misc/netlogo-bin/netlogo-bin-4.0.4.ebuild new file mode 100644 index 000000000000..8cc322297728 --- /dev/null +++ b/sci-misc/netlogo-bin/netlogo-bin-4.0.4.ebuild @@ -0,0 +1,55 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +inherit eutils java-pkg-2 + +MY_PN="netlogo" +MY_P=${MY_PN}-${PV} + +DESCRIPTION="Cross-platform multi-agent programmable modeling environment" +HOMEPAGE="http://ccl.northwestern.edu/netlogo/" +SRC_URI=" + http://dev.gentoo.org/~jlec/distfiles/${PN/-bin}.gif.tar + http://ccl.northwestern.edu/netlogo/${PV}/${MY_P}.tar.gz" +LICENSE="netlogo" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="" +RDEPEND=">=virtual/jre-1.5" + +S="${WORKDIR}"/${MY_P} + +QA_PREBUILT="/usr/share/"${PN}"/lib/*.so" + +src_install() { + java-pkg_dojar *.jar + java-pkg_dojar extensions/sound/*.jar + java-pkg_dojar extensions/profiler/*.jar + java-pkg_dojar extensions/array/*.jar + java-pkg_dojar extensions/gogo/*.jar + java-pkg_dojar extensions/sample/*.jar + java-pkg_dojar extensions/table/*.jar + java-pkg_dojar extensions/gis/*.jar + java-pkg_dojar lib/*.jar + + dohtml -r docs/* + insinto /usr/share/"${PN}"/models + doins -r models/* + + insinto /usr/share/pixmaps + doins "${WORKDIR}"/netlogo.gif + + exeinto /opt/bin + newexe "${FILESDIR}"/netlogo.sh netlogo + + make_desktop_entry netlogo "NetLogo" /usr/share/pixmaps/netlogo.gif + + #3D Libs right now only for x86 + insinto /usr/share/"${PN}"/lib + doins lib/*.so +} diff --git a/sci-misc/netlogo-bin/netlogo-bin-5.0.3-r1.ebuild b/sci-misc/netlogo-bin/netlogo-bin-5.0.3-r1.ebuild new file mode 100644 index 000000000000..47333a85b35c --- /dev/null +++ b/sci-misc/netlogo-bin/netlogo-bin-5.0.3-r1.ebuild @@ -0,0 +1,61 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit eutils java-pkg-2 + +MY_PN="netlogo" +MY_P=${MY_PN}-${PV} + +DESCRIPTION="Cross-platform multi-agent programmable modeling environment" +HOMEPAGE="http://ccl.northwestern.edu/netlogo/" +SRC_URI=" + http://dev.gentoo.org/~jlec/distfiles/${PN/-bin}.gif.tar + http://ccl.northwestern.edu/netlogo/${PV}/${MY_P}.tar.gz" +LICENSE="netlogo GPL-2 LGPL-2.1 LGPL-3 BSD Apache-2.0" +SLOT="0" +KEYWORDS="-* amd64 x86" +IUSE="" + +DEPEND="" +RDEPEND=">=virtual/jre-1.5" + +S="${WORKDIR}"/${MY_P} + +QA_PREBUILT="/usr/share/"${PN}"/lib/Linux-*/*.so" + +src_install() { + insinto /usr/share/"${PN}"/ + doins *.jar + rm lib/quaqua-7.3.4.jar + java-pkg_dojar extensions/sound/*.jar + java-pkg_dojar extensions/profiler/*.jar + java-pkg_dojar extensions/array/*.jar + java-pkg_dojar extensions/gogo/*.jar + java-pkg_dojar extensions/bitmap/*.jar + java-pkg_dojar extensions/table/*.jar + java-pkg_dojar extensions/gis/*.jar + java-pkg_dojar lib/*.jar + + dohtml -r docs/* + dodoc "docs/NetLogo User Manual.pdf" docs/shapes.nlogo + insinto /usr/share/"${PN}"/models + doins -r models/* + + insinto /usr/share/pixmaps + newins "${S}"/icon.ico netlogo.ico + + exeinto /opt/bin + newexe "${FILESDIR}"/netlogo-5.0.3.sh netlogo + newexe "${FILESDIR}"/netlogo-3d.sh netlogo-3d + newexe "${FILESDIR}"/hubnet.sh hubnet + make_desktop_entry netlogo "NetLogo" /usr/share/pixmaps/netlogo.ico + make_desktop_entry netlogo-3d "NetLogo 2D" /usr/share/pixmaps/netlogo.ico + make_desktop_entry hubnet "NetLogo Hubnet" /usr/share/pixmaps/netlogo.ico + + #3D Libs right now only for x86 + insinto /usr/share/"${PN}"/lib + doins -r lib/Linux-* +} diff --git a/sci-misc/oww/Manifest b/sci-misc/oww/Manifest new file mode 100644 index 000000000000..64848c90d30c --- /dev/null +++ b/sci-misc/oww/Manifest @@ -0,0 +1,2 @@ +DIST oww-0.86.4.tar.gz 927032 SHA256 ad8347590d29d58dfa693ee1be0bf49a08bb8d1e065dc119e7f6624303262ae0 SHA512 b97ddd164fe81848e87466992414c8382a0f681bd8f1e16fc51a43facb73f073eb6b0c1da858f4d2d1ffc09273b05b6c3b526a1ccf1d572dbbfd3bfcd0742e05 WHIRLPOOL 82f3a61f25fcfe2e30fed4550b8d647010ab2a5c7ba8083341f3fee8157968a647df0361b08bfc55c76d7c150a249b53aba4dc886621eda0c7a64b3b24516968 +DIST oww-0.86.5.tar.gz 926962 SHA256 d374cfb421b8a421acd3d049b3ec6113e25ebfdf31a973143ee05ac69a8a30d6 SHA512 cc787379790367eea02423f5213a8947de906d6ccdebb1b76e97196e0be9d9f86e77fbc402693588ae4d7db69968caa7bc9e97e8dfc9395bf420d9df51b28ba9 WHIRLPOOL 2a777fe31116a16526851e8d8e7d60d8549c2db752d771b278cd1036e50c45e2508717fbd1541ff0bcc70302d98289a956c676d7ed3faa214ed29dd6b8c7c229 diff --git a/sci-misc/oww/files/oww-0.86.4-build.patch b/sci-misc/oww/files/oww-0.86.4-build.patch new file mode 100644 index 000000000000..19f96a0c8551 --- /dev/null +++ b/sci-misc/oww/files/oww-0.86.4-build.patch @@ -0,0 +1,79 @@ + Makefile.am | 3 +-- + configure.in | 15 ++++++++------- + src/Makefile.am | 2 +- + 3 files changed, 10 insertions(+), 10 deletions(-) + +diff --git a/Makefile.am b/Makefile.am +index f90cc9d..36495a7 100644 +--- a/Makefile.am ++++ b/Makefile.am +@@ -5,10 +5,9 @@ + + SUBDIRS = src pixmaps po + +-owwdocdir = ${prefix}/doc/oww ++owwdocdir = ${docdir} + owwdoc_DATA = \ + README\ +- COPYING\ + AUTHORS\ + ChangeLog\ + INSTALL\ +diff --git a/configure.in b/configure.in +index dbc694e..a9c779f 100644 +--- a/configure.in ++++ b/configure.in +@@ -6,6 +6,8 @@ AM_INIT_AUTOMAKE + + AM_CONFIG_HEADER(config.h) + ++AC_CONFIG_MACRO_DIR([.]) ++ + AC_ISC_POSIX + dnl CFLAGS="" + AC_SUBST(CFLAGS) +@@ -134,17 +136,16 @@ else + AC_MSG_WARN(interactive CLI will not be build) + fi + +-AC_ARG_ENABLE(gui, , build_gui=no, build_gui=yes) +-AM_CONDITIONAL(DISABLEGUI, test "x$build_gui" = "xno") ++AC_ARG_ENABLE([gui],AS_HELP_STRING([--disable-gui], [Do not build gtk gui])) + +-if test "$build_gui" = yes ; then ++AM_CONDITIONAL([DISABLEGUI], [test "x$enable_gui" != "xyes"]) ++ ++AS_IF([test "x$enable_gui" != "xno"], [ + AC_MSG_WARN(building gui) + PKG_CHECK_MODULES(GTK, gtk+-2.0 >= 2.4.0 gdk-2.0 gdk-pixbuf-2.0 gmodule-export-2.0,,exit) + AC_SUBST(GTK_LIBS) + AC_SUBST(GTK_CFLAGS) +-else +- AC_MSG_WARN(skipping GTK gui) +-fi ++]) + + dnl How many times do we retry T on failure? + AC_ARG_ENABLE(temptries, +@@ -319,7 +320,7 @@ cat<<EOF + ------------------------------ + Oww version $VERSION by Simon Melhuish (simon@melhuish.info) + +- build_gui = $build_gui ++ build_gui = $xgui + interactive = $interactive + seriallock = $seriallock + USB support = $usb_msg +diff --git a/src/Makefile.am b/src/Makefile.am +index e0f6746..c02aab5 100644 +--- a/src/Makefile.am ++++ b/src/Makefile.am +@@ -2,7 +2,7 @@ + + # Needs USB_CFLAGS here else things like musbllnk compile will fail if usb.h + # isn't in the compilers standard include path. +-INCLUDES = \ ++AM_CPPFLAGS = \ + $(USB_CFLAGS)\ + $(GTK_CFLAGS) + diff --git a/sci-misc/oww/files/oww-0.86.5-format-security.patch b/sci-misc/oww/files/oww-0.86.5-format-security.patch new file mode 100644 index 000000000000..190c637e1983 --- /dev/null +++ b/sci-misc/oww/files/oww-0.86.5-format-security.patch @@ -0,0 +1,30 @@ + src/file.c | 2 +- + src/werr_linux.c | 2 +- + 2 files changed, 2 insertions(+), 2 deletions(-) + +diff --git a/src/file.c b/src/file.c +index 9726564..af2f672 100644 +--- a/src/file.c ++++ b/src/file.c +@@ -152,7 +152,7 @@ int file_check_file(char *file_name, int create) + + fp = fopen(file_name, "w") ; + if (!fp) return 0 ; +- fprintf(fp, setup_format_loghead) ; ++ fprintf(fp, "%s", setup_format_loghead) ; + fprintf(fp, "\n") ; + fclose(fp) ; + return 1 ; +diff --git a/src/werr_linux.c b/src/werr_linux.c +index 50d3993..0f8834e 100644 +--- a/src/werr_linux.c ++++ b/src/werr_linux.c +@@ -331,7 +331,7 @@ void werr(int flags, char* format, ...) + else + syslog_level = LOG_DEBUG ; + +- syslog(syslog_level, message) ; ++ syslog(syslog_level, "%s", message) ; + } + # endif + # else // i.e. ifndef NOGUI diff --git a/sci-misc/oww/metadata.xml b/sci-misc/oww/metadata.xml new file mode 100644 index 000000000000..40818b6aa6b4 --- /dev/null +++ b/sci-misc/oww/metadata.xml @@ -0,0 +1,8 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci</herd> + <upstream> + <remote-id type="sourceforge">oww</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/oww/oww-0.86.4.ebuild b/sci-misc/oww/oww-0.86.4.ebuild new file mode 100644 index 000000000000..1f8ed82ebf0e --- /dev/null +++ b/sci-misc/oww/oww-0.86.4.ebuild @@ -0,0 +1,38 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils + +DESCRIPTION="A one-wire weather station for Dallas Semiconductor" +HOMEPAGE="http://oww.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" + +SLOT="0" +LICENSE="Artistic" +KEYWORDS="~amd64 ~x86" +IUSE="gtk nls usb" + +RDEPEND=" + net-misc/curl + gtk? ( x11-libs/gtk+:2 )" +DEPEND="${RDEPEND} + virtual/pkgconfig" + +PATCHES=( + "${FILESDIR}"/${P}-build.patch + ) + +src_configure() { + local myeconfargs=( + --enable-interactive + $(use_enable nls) + $(use_enable gtk gui) + $(use_with usb) + ) + autotools-utils_src_configure +} diff --git a/sci-misc/oww/oww-0.86.5.ebuild b/sci-misc/oww/oww-0.86.5.ebuild new file mode 100644 index 000000000000..d94afc32cfd6 --- /dev/null +++ b/sci-misc/oww/oww-0.86.5.ebuild @@ -0,0 +1,39 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +AUTOTOOLS_AUTORECONF=true + +inherit autotools-utils + +DESCRIPTION="A one-wire weather station for Dallas Semiconductor" +HOMEPAGE="http://oww.sourceforge.net/" +SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" + +SLOT="0" +LICENSE="Artistic" +KEYWORDS="~amd64 ~x86" +IUSE="gtk nls usb" + +RDEPEND=" + net-misc/curl + gtk? ( x11-libs/gtk+:2 )" +DEPEND="${RDEPEND} + virtual/pkgconfig" + +PATCHES=( + "${FILESDIR}"/${PN}-0.86.4-build.patch + "${FILESDIR}"/${P}-format-security.patch + ) + +src_configure() { + local myeconfargs=( + --enable-interactive + $(use_enable nls) + $(use_enable gtk gui) + $(use_with usb) + ) + autotools-utils_src_configure +} diff --git a/sci-misc/pythoncad/Manifest b/sci-misc/pythoncad/Manifest new file mode 100644 index 000000000000..a4edc43fddaf --- /dev/null +++ b/sci-misc/pythoncad/Manifest @@ -0,0 +1 @@ +DIST PythonCAD-DS1-R37.tar.gz 504053 SHA256 74222bd43af1e66ab31a45782ed7bd94d54ccbbdb7a58046ec2775f27f806031 SHA512 dfc0dd3272f447202c0cf12e60c39d877390ccf6696529f6bcce9a4442db4f09b735d718bc5611d6c33fbedf2190c496fb7a737001eb73a38fbce1ae80eadc81 WHIRLPOOL bab1dc5162bbd4596ed6729a016fc4b642277293a423860ac22aa2439f5e18629dc376455ef82186b1f11780871d5f7b7ac6191d108a62e18dc54ff077bef2d9 diff --git a/sci-misc/pythoncad/files/pythoncad-1.37-png.patch b/sci-misc/pythoncad/files/pythoncad-1.37-png.patch new file mode 100644 index 000000000000..7d36625e21a8 --- /dev/null +++ b/sci-misc/pythoncad/files/pythoncad-1.37-png.patch @@ -0,0 +1,24 @@ +diff -ru PythonCAD-DS1-R37~/PythonCAD/Interface/Gtk/gtkDialog.py PythonCAD-DS1-R37/PythonCAD/Interface/Gtk/gtkDialog.py +--- PythonCAD-DS1-R37~/PythonCAD/Interface/Gtk/gtkDialog.py 2010-03-11 00:01:58.000000000 +0100 ++++ PythonCAD-DS1-R37/PythonCAD/Interface/Gtk/gtkDialog.py 2010-03-11 00:03:48.000000000 +0100 +@@ -107,7 +107,7 @@ + _abautDialog.set_program_name("PythonCad") + _abautDialog.set_version("DS1-R37") + _abautDialog.set_comments("CAD built from Python") +- _iconPath=os.path.join(os.getcwd(),"gtkpycad.png") ++ _iconPath=os.path.join("/usr/share/pixmaps/pythoncad.png") + _pixBuf=gtk.gdk.pixbuf_new_from_file(_iconPath) + _abautDialog.set_logo(_pixBuf) + _abautDialog.set_website("http://sourceforge.net/projects/pythoncad") +diff -ru PythonCAD-DS1-R37~/PythonCAD/Interface/Gtk/gtkimage.py PythonCAD-DS1-R37/PythonCAD/Interface/Gtk/gtkimage.py +--- PythonCAD-DS1-R37~/PythonCAD/Interface/Gtk/gtkimage.py 2010-03-11 00:01:58.000000000 +0100 ++++ PythonCAD-DS1-R37/PythonCAD/Interface/Gtk/gtkimage.py 2010-03-11 00:02:59.000000000 +0100 +@@ -154,7 +154,7 @@ + self.__image = image + self.__window = gtk.Window() + self.__window.set_title(image.filename) +- self.__window.set_icon_from_file("gtkpycad.png") ++ self.__window.set_icon_from_file("/usr/share/pixmaps/pythoncad.png") + self.__window.connect("destroy", self.__destroyEvent) + self.__window.connect("event", self.__windowEvent) + self.__window.connect("key_press_event", self.__keyPressEvent) diff --git a/sci-misc/pythoncad/metadata.xml b/sci-misc/pythoncad/metadata.xml new file mode 100644 index 000000000000..45e643c9b43c --- /dev/null +++ b/sci-misc/pythoncad/metadata.xml @@ -0,0 +1,11 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>maintainer-needed@gentoo.org</email> + </maintainer> + <longdescription>a scriptable, open-source, easy to use CAD</longdescription> + <upstream> + <remote-id type="sourceforge">pythoncad</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/pythoncad/pythoncad-1.37-r1.ebuild b/sci-misc/pythoncad/pythoncad-1.37-r1.ebuild new file mode 100644 index 000000000000..d7b21f494ea8 --- /dev/null +++ b/sci-misc/pythoncad/pythoncad-1.37-r1.ebuild @@ -0,0 +1,49 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI="5" + +PYTHON_COMPAT=( python2_7 ) +inherit eutils distutils-r1 versionator + +MY_PN="PythonCAD" +MY_PV="DS$(get_major_version)-R$(get_after_major_version)" +MY_P="${MY_PN}-${MY_PV}" + +DESCRIPTION="CAD program written in PyGTK" +HOMEPAGE="http://sourceforge.net/projects/pythoncad" +SRC_URI="mirror://sourceforge/pythoncad/${MY_P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +RDEPEND="dev-python/pygtk:2[${PYTHON_USEDEP}]" +DEPEND="" + +S="${WORKDIR}/${MY_P}" + +PATCHES=( "${FILESDIR}/${P}-png.patch" ) + +python_prepare_all() { + distutils-r1_python_prepare_all + sed -i \ + -e "s/gtkpycad.png/pythoncad.png/" \ + -e "s/gtkpycad.py/pythoncad/" \ + "${PN}.desktop" || die "sed failed" +} + +python_install() { + distutils-r1_python_install + python_newscript gtkpycad.py pythoncad +} + +src_install() { + distutils-r1_src_install + + insinto /etc/"${PN}" + doins prefs.py + domenu "${PN}".desktop + newicon gtkpycad.png "${PN}".png +} diff --git a/sci-misc/repsnapper/Manifest b/sci-misc/repsnapper/Manifest new file mode 100644 index 000000000000..1c51da697a9f --- /dev/null +++ b/sci-misc/repsnapper/Manifest @@ -0,0 +1,2 @@ +DIST repsnapper-2.2.0b3.tar.gz 1314244 SHA256 2f55ce6bc19bba84bb6dbcda12f6546fa306fa163527d009ea8d730b85d80513 SHA512 52828b06734976369347cd1daa87cf027eea88bbf53e9a8501511f9dbdacf0388a64ec9e87b2cf3a546d332f80a069ee7934d4ac33d6b2d6e831ef326ae69b98 WHIRLPOOL c7b072ab9f465969e9b3f35c7c2fc8d9c4864e2b59aa9a983f6f8c9f8e7b21d6f29627fd0e6098035911b451790b54a72554e2737ab7da92938cb3bd89e8c242 +DIST repsnapper-2.3.2a3.tar.gz 1344447 SHA256 7c4bc3603401847ce1f15298435c511f76fd74c5d5ae4fc1561c7f378c182fe5 SHA512 f68510baefb898954f58aa5e35909b8215edcd8ee74028e717ad97293091f4b323628ca0ba80ff685d1aef0db4785a2887986b89a95769a70f8f23ab031dafa4 WHIRLPOOL 0693876194c5837091b9f9df7d359833b86222345239f3cf946a0e6efd2f87efc35380745cb2a4dd5587a5193c9a3e54d36454fabb0d38722a02ac70d510645d diff --git a/sci-misc/repsnapper/metadata.xml b/sci-misc/repsnapper/metadata.xml new file mode 100644 index 000000000000..072d3e24dc46 --- /dev/null +++ b/sci-misc/repsnapper/metadata.xml @@ -0,0 +1,10 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>slis@gentoo.org</email> + </maintainer> + <upstream> + <remote-id type="github">timschmidt/repsnapper</remote-id> + </upstream> +</pkgmetadata> diff --git a/sci-misc/repsnapper/repsnapper-2.2.0b_p3.ebuild b/sci-misc/repsnapper/repsnapper-2.2.0b_p3.ebuild new file mode 100644 index 000000000000..559738303653 --- /dev/null +++ b/sci-misc/repsnapper/repsnapper-2.2.0b_p3.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit autotools versionator + +MY_PV="$(get_version_component_range 1-4)$(get_version_component_range 5)" +MY_PV=${MY_PV/p/} + +DESCRIPTION="Host software for controlling the RepRap open source 3D printer" +HOMEPAGE="https://github.com/timschmidt/repsnapper" +SRC_URI="https://github.com/timschmidt/${PN}/archive/${MY_PV}.tar.gz -> ${PN}-${MY_PV}.tar.gz" + +S="${WORKDIR}/${PN}-${MY_PV}" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND=" + >=dev-cpp/gtkglextmm-1.2 + dev-cpp/gtkmm:2.4 + dev-cpp/libxmlpp + dev-libs/libzip + virtual/opengl +" +RDEPEND=${DEPEND} + +src_prepare() { + eautoreconf +} diff --git a/sci-misc/repsnapper/repsnapper-2.3.2a_p3.ebuild b/sci-misc/repsnapper/repsnapper-2.3.2a_p3.ebuild new file mode 100644 index 000000000000..559738303653 --- /dev/null +++ b/sci-misc/repsnapper/repsnapper-2.3.2a_p3.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit autotools versionator + +MY_PV="$(get_version_component_range 1-4)$(get_version_component_range 5)" +MY_PV=${MY_PV/p/} + +DESCRIPTION="Host software for controlling the RepRap open source 3D printer" +HOMEPAGE="https://github.com/timschmidt/repsnapper" +SRC_URI="https://github.com/timschmidt/${PN}/archive/${MY_PV}.tar.gz -> ${PN}-${MY_PV}.tar.gz" + +S="${WORKDIR}/${PN}-${MY_PV}" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND=" + >=dev-cpp/gtkglextmm-1.2 + dev-cpp/gtkmm:2.4 + dev-cpp/libxmlpp + dev-libs/libzip + virtual/opengl +" +RDEPEND=${DEPEND} + +src_prepare() { + eautoreconf +} diff --git a/sci-misc/repsnapper/repsnapper-9999.ebuild b/sci-misc/repsnapper/repsnapper-9999.ebuild new file mode 100644 index 000000000000..3d04fe6ee6c5 --- /dev/null +++ b/sci-misc/repsnapper/repsnapper-9999.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit autotools git-2 + +DESCRIPTION="Host software for controlling the RepRap open source 3D printer" +HOMEPAGE="https://github.com/timschmidt/repsnapper" +EGIT_REPO_URI="git://github.com/timschmidt/${PN}.git" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND=" + >=dev-cpp/gtkglextmm-1.2 + >=dev-cpp/gtkmm-2.4 + dev-cpp/libxmlpp + dev-libs/libzip + virtual/opengl +" +RDEPEND=${DEPEND} + +src_prepare() { + eautoreconf +} diff --git a/sci-misc/vitables/Manifest b/sci-misc/vitables/Manifest new file mode 100644 index 000000000000..ef109face042 --- /dev/null +++ b/sci-misc/vitables/Manifest @@ -0,0 +1 @@ +DIST ViTables-2.1.tar.gz 3111661 SHA256 f0413fa725617fbb3f0be03cb1f41b5b841c6946098a629f3fcb8a99fb9be14a SHA512 9ca48fbc8aa33dd3e1e02e2cf2055082831a95f5c24a2ab3bb294d7b09a3f09e62e500b0d69f8843a93af0db6dfc25873a57604f3fd433c0168eb335a1816bc8 WHIRLPOOL d526744105cea3ef7812db52f5e1a2ef74ca43431de167355afe0c6670a2752d3f4f5613f72f1f11e043cd6de0d4007086b4d548e78f7a3cbeaf4a5c6695babc diff --git a/sci-misc/vitables/files/vitables-2.1-no-docs.patch b/sci-misc/vitables/files/vitables-2.1-no-docs.patch new file mode 100644 index 000000000000..307fb65b043c --- /dev/null +++ b/sci-misc/vitables/files/vitables-2.1-no-docs.patch @@ -0,0 +1,19 @@ +--- setup.py.orig 2011-02-15 11:05:17.000000000 -0800 ++++ setup.py 2012-08-04 12:00:40.704723726 -0700 +@@ -34,13 +34,14 @@ + from distutils.dir_util import copy_tree + from distutils.file_util import copy_file + ++sphinx_found = True + try: + from sphinx.setup_command import BuildDoc + except ImportError: +- pass ++ sphinx_found = False ++ + + +-sphinx_found = True + + + diff --git a/sci-misc/vitables/metadata.xml b/sci-misc/vitables/metadata.xml new file mode 100644 index 000000000000..12cad61721d7 --- /dev/null +++ b/sci-misc/vitables/metadata.xml @@ -0,0 +1,11 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>sci</herd> +<longdescription> + ViTables is a component of the PyTables family. It is a GUI for + browsing and editing files in both PyTables and HDF5 formats. It is + developed using Python and PyQt (the Python bindings to the Qt), so + it can run on any platform that supports these components. +</longdescription> +</pkgmetadata> diff --git a/sci-misc/vitables/vitables-2.1.ebuild b/sci-misc/vitables/vitables-2.1.ebuild new file mode 100644 index 000000000000..244125536a6e --- /dev/null +++ b/sci-misc/vitables/vitables-2.1.ebuild @@ -0,0 +1,56 @@ +# Copyright 1999-2012 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +PYTHON_DEPEND="2:2.5" +SUPPORT_PYTHON_ABIS="1" +RESTRICT_PYTHON_ABIS="3.*" + +MY_PN=ViTables +MY_P=${MY_PN}-${PV} + +inherit distutils eutils + +DESCRIPTION="A graphical tool for browsing and editing files in both PyTables and HDF5 formats" +HOMEPAGE="http://vitables.org/" +SRC_URI="http://${PN}.googlecode.com/files/${MY_P}.tar.gz" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" +IUSE="doc examples" + +RDEPEND=" + dev-python/pytables + dev-python/PyQt4[X]" # FIXME: check if any other useflags are needed +DEPEND="${RDEPEND} + doc? ( dev-python/sphinx )" + +S=${WORKDIR}/${MY_P} + +src_prepare() { + epatch "${FILESDIR}"/${P}-no-docs.patch +} + +src_compile() { + distutils_src_compile + if use doc; then + # fixme: multiple python (anyone cares?) + python setup.py build_sphinx || die + fi +} + +src_install() { + dodir /usr/share/icons/hicolor/scalable/apps + dodir /usr/share/applications + XDG_DATA_DIRS="${ED}/usr/share" distutils_src_install + + if use examples; then + insinto /usr/share/doc/${PF}/examples + doins -r examples/* + fi + use doc && dohtml -r build/sphinx/html/* && \ + dodoc build/sphinx/latex/*.pdf +} |