summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
-rw-r--r--sci-libs/htslib/Manifest5
-rw-r--r--sci-libs/htslib/htslib-1.0.ebuild44
-rw-r--r--sci-libs/htslib/htslib-1.1.ebuild42
-rw-r--r--sci-libs/htslib/htslib-1.2.1.ebuild20
-rw-r--r--sci-libs/htslib/htslib-1.3.1.ebuild20
-rw-r--r--sci-libs/htslib/htslib-1.3.ebuild20
6 files changed, 0 insertions, 151 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest
index 728098018cc..fbf89b440a9 100644
--- a/sci-libs/htslib/Manifest
+++ b/sci-libs/htslib/Manifest
@@ -1,6 +1 @@
-DIST htslib-1.0.tar.bz2 842174 SHA256 3d53fb081fafd930cadfee6f950faacc1993a0f4a9fa329fc897865fc6b331bc SHA512 aee7080a31c3fe5bd1fe4a16102da4aef7d415fd022781c1a5bdc1316ca50f8fcabbb95a39adc867e4eb5ac2d8ed63ab15ceafcd768e840d2593282916313507 WHIRLPOOL 512f4a95e98129151fef34fb90294138bc0aec40d5c2345d15d49ded02810c4663b8ff65726ced9f0d9ceb300295da066f6025d2b1966224937fc9ff58f2b58f
-DIST htslib-1.1.tar.bz2 844870 SHA256 204e894074d9a864d27b607fda19f6240c5da351bb61bfc6c94beaa8790e4d58 SHA512 cde0b01583035f139203b8e9884dc97846bdf02fbb6dd2af74d0829270c2141ac490d0ca3ece4f9afd9d66d6af235452d3e94bbe0ea6e1a8625405735a813271 WHIRLPOOL 56e986cd7ee29d2d680ef55fd9128d4e43bacff4d72bc83df7b8c1e6c8d53b4a726c576d690dee272397778a6796096072fc3fffe4a4f1cbc0179a91fe9405b6
-DIST htslib-1.2.1.tar.bz2 911326 SHA256 bddb1372b9215b32e0f21d8394bab859c57cb00324a8dc06775cdac5b4d662b0 SHA512 23db1861cd08b503223f14dcbbdf9c6ae24dec648c987816abc47cc85fa7287c2405be72193cf492fff4f5991ff7b1f55dc386004588971a0e43a2f1c7355199 WHIRLPOOL d81f1cc74bb7e70d538f3e616f290a50017c56c517d9986f84c897b75524848135dd1788f92ff983c701ab7d5e84163123c570a200b83bea6a7922f4c1293107
-DIST htslib-1.3.1.tar.bz2 983165 SHA256 49d53a2395b8cef7d1d11270a09de888df8ba06f70fe68282e8235ee04124ae6 SHA512 cdc34166d36a3bf4479d020a2352fe6e8fb7ad92c3205b3fbde3e83b0916cffcfdcf2f28a68a4937e58b903ea8913558ae3a90c2445212da1f25a3b30c43d786 WHIRLPOOL 474de4015cf4f8c2b469f45693ba3e677be246b946a8ba70205219dd25f16ce85def7c062c4073326aa0a795a732e84664ab7df2c002cca6e47abce7777b145c
-DIST htslib-1.3.tar.bz2 952864 SHA256 f203af750ccc80fd421c70a04d90a03097d2ef2abe0e6d8f0ae6435d6c11aeab SHA512 1a96fd22632b4a593596645b3a40aa59aaaaa9f342f97ec8c1807fe4058576420ba2c6279594d00bfc67db93aa858bd63bf3e2cf1a63e79605791c6f8aef097c WHIRLPOOL 49140830c525cea21533cc9924a5f0a5e6aecef24cf7ac58ddc959faac205b1bcc2d6f423daab6d6ff8cb5c9ad5b750cfef9e7181a68485ab35e10b7932ab4a6
DIST htslib-1.5.tar.bz2 1051132 SHA256 a02b515ea51d86352b089c63d778fb5e8b9d784937cf157e587189cb97ad922d SHA512 fd58552ddbd178f9797123fdaf47914ccd0e2aefd055fc6557ac8f479c600775616107cfa871c3acd93079f45974a19f443941a79f2acfd2a8c2983ef35b8917 WHIRLPOOL fb7026c26816db6746006d1b5ade235ce10181a633c9bab8ed3d9f72aaa152d0b68fd69d8988d69fef2bd2d57f9676de0761b2577ef0dd1d334da5d028cb64ee
diff --git a/sci-libs/htslib/htslib-1.0.ebuild b/sci-libs/htslib/htslib-1.0.ebuild
deleted file mode 100644
index d5c594b0cfb..00000000000
--- a/sci-libs/htslib/htslib-1.0.ebuild
+++ /dev/null
@@ -1,44 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit multilib toolchain-funcs
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0"
-LICENSE="MIT"
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs"
-
-src_prepare() {
- sed \
- -e "/libdir/s:lib$:$(get_libdir):g" \
- -i Makefile || die
-}
-
-src_compile() {
- emake \
- AR="$(tc-getAR)" \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}" \
- LDFLAGS="${LDFLAGS}"
-}
-
-src_install() {
- emake \
- DESTDIR="${D}" \
- prefix="${EPREFIX}/usr" \
- install
-
- rm "${ED}/usr/share/man/man1/libhts.so.1" || die
-
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-
- dodoc README
-}
diff --git a/sci-libs/htslib/htslib-1.1.ebuild b/sci-libs/htslib/htslib-1.1.ebuild
deleted file mode 100644
index 5f9d646c827..00000000000
--- a/sci-libs/htslib/htslib-1.1.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit multilib toolchain-funcs
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0"
-LICENSE="MIT"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs"
-
-src_prepare() {
- sed \
- -e "/libdir/s:lib$:$(get_libdir):g" \
- -i Makefile || die
-}
-
-src_compile() {
- emake \
- AR="$(tc-getAR)" \
- CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}" \
- LDFLAGS="${LDFLAGS}"
-}
-
-src_install() {
- emake \
- DESTDIR="${D}" \
- prefix="${EPREFIX}/usr" \
- install
-
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-
- dodoc README
-}
diff --git a/sci-libs/htslib/htslib-1.2.1.ebuild b/sci-libs/htslib/htslib-1.2.1.ebuild
deleted file mode 100644
index 0ff4541bf01..00000000000
--- a/sci-libs/htslib/htslib-1.2.1.ebuild
+++ /dev/null
@@ -1,20 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0"
-LICENSE="MIT"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}
diff --git a/sci-libs/htslib/htslib-1.3.1.ebuild b/sci-libs/htslib/htslib-1.3.1.ebuild
deleted file mode 100644
index be2d3df48d4..00000000000
--- a/sci-libs/htslib/htslib-1.3.1.ebuild
+++ /dev/null
@@ -1,20 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0"
-LICENSE="MIT"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}
diff --git a/sci-libs/htslib/htslib-1.3.ebuild b/sci-libs/htslib/htslib-1.3.ebuild
deleted file mode 100644
index be2d3df48d4..00000000000
--- a/sci-libs/htslib/htslib-1.3.ebuild
+++ /dev/null
@@ -1,20 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="C library for high-throughput sequencing data formats"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="0"
-LICENSE="MIT"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="static-libs"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}