diff options
Diffstat (limited to 'sci-biology/psipred/files/2.6.1-Makefile.patch')
| -rw-r--r-- | sci-biology/psipred/files/2.6.1-Makefile.patch | 42 |
1 files changed, 42 insertions, 0 deletions
diff --git a/sci-biology/psipred/files/2.6.1-Makefile.patch b/sci-biology/psipred/files/2.6.1-Makefile.patch new file mode 100644 index 000000000000..0a6df743ec83 --- /dev/null +++ b/sci-biology/psipred/files/2.6.1-Makefile.patch @@ -0,0 +1,42 @@ +--- src/Makefile 2008-03-09 22:59:51.000000000 +0100 ++++ src/Makefile.new 2009-04-09 12:31:38.669457918 +0200 +@@ -6,9 +6,7 @@ + #### CFLAGS Flags to pass to C compiler. + + INCDIR = . +-CC = cc + +-CFLAGS = -O + LIBS = -lm + + all: psipred psipass2 seq2mtx pfilt +@@ -20,13 +18,13 @@ + /bin/rm -f psipred psipass2 seq2mtx pfilt + + psipred: sspred_avpred.c ssdefs.h sspred_net.h +- $(CC) $(CFLAGS) sspred_avpred.c $(LIBS) -o psipred ++ $(CC) $(CFLAGS) $(LDFLAGS) sspred_avpred.c $(LIBS) -o psipred + + psipass2: sspred_hmulti.c ssdefs.h sspred_net2.h +- $(CC) $(CFLAGS) sspred_hmulti.c $(LIBS) -o psipass2 ++ $(CC) $(CFLAGS) $(LDFLAGS) sspred_hmulti.c $(LIBS) -o psipass2 + + seq2mtx: seq2mtx.c +- $(CC) $(CFLAGS) seq2mtx.c $(LIBS) -o seq2mtx ++ $(CC) $(CFLAGS) $(LDFLAGS) seq2mtx.c $(LIBS) -o seq2mtx + + pfilt: pfilt.c +- $(CC) $(CFLAGS) pfilt.c $(LIBS) -o pfilt ++ $(CC) $(CFLAGS) $(LDFLAGS) pfilt.c $(LIBS) -o pfilt +--- src/Makefile 2009-04-09 12:34:41.636939862 +0200 ++++ src/Makefile.new 2009-04-09 12:36:03.796098341 +0200 +@@ -12,7 +12,8 @@ + all: psipred psipass2 seq2mtx pfilt + + install: +- /bin/cp psipred psipass2 seq2mtx pfilt ../bin ++ /bin/mkdir -p $(DESTDIR)/usr/bin ++ /bin/cp psipred psipass2 seq2mtx pfilt $(DESTDIR)/usr/bin + + clean: + /bin/rm -f psipred psipass2 seq2mtx pfilt |