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Diffstat (limited to 'sci-physics')
-rw-r--r--sci-physics/root/Manifest1
-rw-r--r--sci-physics/root/metadata.xml1
-rw-r--r--sci-physics/root/root-6.04.06.ebuild498
3 files changed, 0 insertions, 500 deletions
diff --git a/sci-physics/root/Manifest b/sci-physics/root/Manifest
index 16e83ab4a34b..0f1fa9ef4b39 100644
--- a/sci-physics/root/Manifest
+++ b/sci-physics/root/Manifest
@@ -1,3 +1,2 @@
DIST root_v5.34.36.source.tar.gz 75427331 BLAKE2B 203af03e1459c7fe079fcb1b30da145b3262f90c074abb7ff8fb3b1b2b90ac24391ce51aa8afbd10e0db8d69549207f15176207bc30a13720e0ae94342a38dfa SHA512 2cc0c8f8b63b2a3ce01c49c41704483548a7324d92c21a63e3e36a00f4d6f5656a7844fdf48cb71a6f2a2c974112527300ffd3bb5502d8365ffaf138e6ae4c7a
-DIST root_v6.04.06.source.tar.gz 99180724 BLAKE2B 96416ff36bd8e3084ca3a89bb73bfd4750f25d1fbe132ffac0288a7bdebf0200e769efc5e7d5a0d138176db67cb7531cd28124d3b7c568028a125d8a79ec7669 SHA512 ac96ac998ed4894587b7d286d79bcbea7b33f15764cc2513ae089e86c584e2dcb064cd135d44a4bfd2bede368eb772ccbffcd6bf426857a1236f5d7e9f5ce6fd
DIST root_v6.12.04.source.tar.gz 162106020 BLAKE2B f27382cf748d4e31d71b460ecbf9b9f12294fb212bf23dc3d34c98737d8815b2eea2318247e56953ba184bb790bbb2f4b43c675dcb7a02b77c011f19e15d0d83 SHA512 67e400e9e7e8cabfb036a1eb1c262d462f613de7d6e18f8a17109c8eb52932e9ba77e69ab7b1f62c582d06b7f4d020cc888a0dfbefb4d3716743f142c3e3c063
diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml
index 1999cbbbd3b1..b57d99b68fc0 100644
--- a/sci-physics/root/metadata.xml
+++ b/sci-physics/root/metadata.xml
@@ -27,7 +27,6 @@
<flag name="fits">Enable support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
<flag name="fortran">Compile included Fortran programs</flag>
<flag name="gdml">Enable GDML writer and reader</flag>
- <flag name="geocad">Enable ROOT-CAD interface using <pkg>sci-libs/opencascade</pkg></flag>
<flag name="http">Enable http server support including but not limited to fastcgi support</flag>
<flag name="jemalloc">Enable support for <pkg>dev-libs/jemalloc</pkg></flag>
<flag name="libcxx">Build ROOT against <pkg>sys-libs/libcxx</pkg></flag>
diff --git a/sci-physics/root/root-6.04.06.ebuild b/sci-physics/root/root-6.04.06.ebuild
deleted file mode 100644
index 826af7a7fffb..000000000000
--- a/sci-physics/root/root-6.04.06.ebuild
+++ /dev/null
@@ -1,498 +0,0 @@
-# Copyright 1999-2016 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit elisp-common eutils fdo-mime fortran-2 multilib python-single-r1 \
- toolchain-funcs user versionator
-
-DESCRIPTION="C++ data analysis framework and interpreter from CERN"
-HOMEPAGE="https://root.cern.ch"
-SRC_URI="https://root.cern.ch/download/${PN}_v${PV}.source.tar.gz"
-
-SLOT="0/$(get_version_component_range 1-3 ${PV})"
-LICENSE="LGPL-2.1 freedist MSttfEULA LGPL-3 libpng UoI-NCSA"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="+X afs doc emacs examples fits fftw gdml geocad
- graphviz http kerberos ldap +math +memstat mpi mysql odbc
- +opengl openmp oracle postgres prefix pythia6 pythia8
- python qt4 R shadow sqlite ssl table +tiff xinetd xml xrootd
- zeroconf"
-
-# TODO: add support for: davix
-# TODO: ROOT-6 supports x32 ABI, but half of its dependencies doesn't
-# TODO: unbundle: cling, vdt
-
-REQUIRED_USE="
- !X? ( !opengl !qt4 !tiff )
- mpi? ( math !openmp )
- openmp? ( math !mpi )
- python? ( ${PYTHON_REQUIRED_USE} )
-"
-
-CDEPEND="
- app-arch/xz-utils:0=
- >=dev-lang/cfortran-4.4-r2
- dev-libs/libpcre:3=
- media-fonts/dejavu
- media-libs/freetype:2=
- media-libs/libpng:0=
- >=sys-devel/clang-3.4:=
- sys-libs/ncurses:=
- sys-libs/zlib:0=
- X? (
- media-libs/ftgl:0=
- media-libs/glew:0=
- x11-libs/libX11:0=
- x11-libs/libXext:0=
- x11-libs/libXpm:0=
- || (
- media-libs/libafterimage[gif,jpeg,png,tiff?]
- >=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff?]
- )
- opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps:0= )
- qt4? (
- dev-qt/qtgui:4=
- dev-qt/qtopengl:4=
- dev-qt/qt3support:4=
- dev-qt/qtsvg:4=
- dev-qt/qtwebkit:4=
- dev-qt/qtxmlpatterns:4=
- )
- x11-libs/libXft:0=
- )
- afs? ( net-fs/openafs )
- emacs? ( virtual/emacs )
- fits? ( sci-libs/cfitsio:0= )
- fftw? ( sci-libs/fftw:3.0= )
- geocad? ( <sci-libs/opencascade-6.8.0:= )
- graphviz? ( media-gfx/graphviz:0= )
- http? ( dev-libs/fcgi:0= )
- kerberos? ( virtual/krb5 )
- ldap? ( net-nds/openldap:0= )
- math? (
- sci-libs/gsl:0=
- sci-mathematics/unuran:0=
- mpi? ( virtual/mpi )
- )
- mysql? ( virtual/mysql )
- odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
- oracle? ( dev-db/oracle-instantclient-basic:0= )
- postgres? ( dev-db/postgresql:= )
- pythia6? ( sci-physics/pythia:6= )
- pythia8? ( >=sci-physics/pythia-8.1.80:8= )
- python? ( ${PYTHON_DEPS} )
- R? ( dev-lang/R )
- shadow? ( virtual/shadow )
- sqlite? ( dev-db/sqlite:3= )
- ssl? ( dev-libs/openssl:0= )
- xml? ( dev-libs/libxml2:2= )
- xrootd? ( >=net-libs/xrootd-3.3.5:0= )
- zeroconf? ( net-dns/avahi:0= )
-"
-
-# TODO: ruby is not yet ported to ROOT-6, reenable when (if?) ready
-# ruby? (
-# dev-lang/ruby:=
-# dev-ruby/rubygems:=
-# )
-
-DEPEND="${CDEPEND}
- virtual/pkgconfig"
-
-RDEPEND="${CDEPEND}
- xinetd? ( sys-apps/xinetd )"
-
-PDEPEND="doc? ( ~app-doc/root-docs-${PV}[http=,math=] )"
-
-# install stuff in ${P} and not ${PF} for easier tracking in root-docs
-DOC_DIR="/usr/share/doc/${P}"
-
-OC_UNSUPPORTED="6.8.0"
-
-die_compiler() {
- eerror "You are using a $(tc-getCXX)-$5 without C++$1 capabilities"
- die "Need one of the following C++$1 capable compilers:\n"\
- " >=sys-devel/gcc[cxx]-$2\n"\
- " >=sys-devel/clang-$3\n"\
- " >=dev-lang/icc-$4"
-}
-
-# check compiler to satisfy minimal versions
-# $1 - std version
-# $2 - g++
-# $3 - clang++
-# $4 - icc/icpc
-check_compiler() {
- local cur ver
- case "$(tc-getCXX)" in
- *clang++*)
- ver="$(best_version sys-devel/clang | sed 's:sys-devel/clang-::')"
- cur="$3"
- ;;
- *g++*)
- ver="$(gcc-version)"
- if version_is_at_least "5" "${ver}"; then
- eerror ""
- eerror "GCC-5 is not yet supported in ROOT-6."
- eerror "The code may build for you, but will have run-time failures."
- eerror "See the following bugs:"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7285"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7319"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7654"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7721"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7818"
- eerror "https://sft.its.cern.ch/jira/browse/ROOT-7895"
- eerror "https://bugs.gentoo.org/show_bug.cgi?id=564306"
- eerror ""
- eerror "Please use GCC-4.9 for now."
- eerror ""
- die "gcc-5 is not yet supported"
- fi
- cur="$2"
- ;;
- *icc*|*icpc*)
- ver="$(best_version dev-lang/icc | sed 's:dev-lang/icc-::')"
- eerror "ROOT-6 is known not to build with ICC."
- eerror "Please report any isuses upstream."
- cur="$4"
- ;;
- *)
- ewarn "You are using an unsupported compiler."
- ewarn "Please report any issues upstream."
- return 0
- ;;
- esac
- version_is_at_least "${cur}" "${ver}" || die_compiler "$1" "$2" "$3" "$4" "${ver}"
-}
-
-pkg_setup() {
- fortran-2_pkg_setup
- use python && python-single-r1_pkg_setup
- echo
- elog "There are extra options on packages not yet in Gentoo:"
- elog "Afdsmgrd, AliEn, castor, Chirp, dCache, gfal, Globus, gLite,"
- elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
- elog "You can use the env variable EXTRA_ECONF variable for this."
- elog "For example, for SRP, you would set: "
- elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=${EROOT%/}/usr/$(get_libdir)\""
- echo
-
- enewgroup rootd
- enewuser rootd -1 -1 /var/spool/rootd rootd
-
- if use math; then
- if use openmp; then
- if [[ "$(tc-getCXX)" == *g++* && "$(tc-getCXX)" != *clang++* ]] && ! tc-has-openmp; then
- ewarn "You are using a g++ without OpenMP capabilities"
- die "Need an OpenMP capable compiler"
- else
- export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
- fi
- elif use mpi; then
- export USE_MPI=1 USE_PARALLEL_MINUIT2=1
- fi
- fi
-
- # c++11 support is mandatory
- check_compiler "11" "4.8" "3.4" "13"
-
- # Active version of opencascade may be >= $OC_UNSUPPORTED,
- # so we need to eselect proper version (it must exist due to DEPEND requirement)
- if use geocad; then
- oc_current=$(eselect opencascade show)
- # Proceed only if active version is unsupported
- if version_is_at_least "${OC_UNSUPPORTED}" "${oc_current}"; then
- local -a vlist
- vlist=( $(version_sort $(eselect opencascade list | awk '/^ / { print $2 }')) )
- local i
- # search for higehr version < $OC_UNSUPPORTED
- # list is sorted acsending, so loop backwards
- for (( i=$(( ${#vlist[@]} -1 )); i>=0; i-- )); do
- version_is_at_least "${OC_UNSUPPORTED}" "${vlist[i]}" || break
- done
- [[ $i == "-1" ]] && die "No suitable opencascade eselect slot is available (<${OC_UNSUPPORTED})"
-
- einfo "Switching opencascade to supported slot: ${oc_current} -> ${vlist[i]}"
- eselect opencascade set ${vlist[i]} > /dev/null || die "eselect opencascade set ${vlist[i]} failed!"
- else
- # forget it, effectively disabling eselect cleanup
- unset oc_current
- fi
- fi
-}
-
-src_prepare() {
- # Second version of makepch is required in order to generate
- # PCH file appropriate for Gentoo include headers layout.
- # This can be done only at install stage, when files are placed
- # as appropriate. Premature modification of makepch.sh will
- # broke build process, however.
- #cp "etc/dictpch/makepch.sh" "etc/dictpch/makepch-gentoo.sh" || die
-
- epatch \
- "${FILESDIR}"/${PN}-5.28.00b-glibc212.patch \
- "${FILESDIR}"/${PN}-5.32.00-afs.patch \
- "${FILESDIR}"/${PN}-5.32.00-cfitsio.patch \
- "${FILESDIR}"/${PN}-5.32.00-chklib64.patch \
- "${FILESDIR}"/${PN}-5.34.13-unuran.patch \
- "${FILESDIR}"/${PN}-6.00.01-dotfont.patch \
- "${FILESDIR}"/${PN}-6.00.01-llvm.patch \
- "${FILESDIR}"/${PN}-6.00.01-nobyte-compile.patch \
- "${FILESDIR}"/${PN}-6.04.06-prop-flags.patch \
- "${FILESDIR}"/${PN}-6.04.06-gsl2.patch
- # "${FILESDIR}"/${PN}-6.02.05-xrootd4.patch
- # "${FILESDIR}"/${PN}-6.02.05-dictpch.patch \
-
- # make sure we use system libs and headers
- rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
- rm -r graf2d/asimage/src/libAfterImage || die
- rm -r graf3d/ftgl/{inc,src} || die
- rm -r graf2d/freetype/src || die
- rm -r graf3d/glew/{inc,src} || die
- rm -r core/pcre/src || die
- rm -r math/unuran/src/unuran-*.tar.gz || die
- LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | \
- xargs -0 rm || die
- rm -r core/lzma/src/*.tar.gz || die
- rm graf3d/gl/{inc,src}/gl2ps.* || die
- sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' \
- graf3d/gl/Module.mk || die
-
- # In Gentoo, libPythia6 is called libpythia6
- # iodbc is in /usr/include/iodbc
- # pg_config.h is checked instead of libpq-fe.h
- sed -i \
- -e 's:libPythia6:libpythia6:g' \
- -e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
- -e 's:libpq-fe.h:pg_config.h:' \
- configure || die "adjusting configure for Gentoo failed"
-
- # prefixify the configure script
- sed -i \
- -e 's:/usr:${EPREFIX}/usr:g' \
- configure || die "prefixify configure failed"
-
- # CSS should use local images
- sed -i -e 's,http://.*/,,' etc/html/ROOT.css || die "html sed failed"
-
- # QTDIR only used for qt3 in gentoo, and configure looks for it.
- unset QTDIR
-}
-
-# NB: ROOT uses bundled LLVM, because it is patched and API-incompatible with
-# system LLVM.
-# NB: As of 6.00.0.1 cmake is not ready as it can't fully replace configure,
-# e.g. for afs and geocad.
-
-src_configure() {
- local -a myconf
- # Some compilers need special care
- case "$(tc-getCXX)" in
- *clang++*)
- myconf=(
- --with-clang
- --with-f77="$(tc-getFC)"
- )
- ;;
- *icc*|*icpc*)
- # For icc we need to provide architecture manually
- # and not to tamper with tc-get*
- use x86 && myconf=( linuxicc )
- use amd64 && myconf=( linuxx8664icc )
- ;;
- *) # gcc goes here too
- myconf=(
- --with-cc="$(tc-getCC)"
- --with-cxx="$(tc-getCXX)"
- --with-f77="$(tc-getFC)"
- --with-ld="$(tc-getCXX)"
- )
- ;;
- esac
-
- # the configure script is not the standard autotools
- myconf+=(
- --prefix="${EPREFIX}/usr"
- --etcdir="${EPREFIX}/etc/root"
- --libdir="${EPREFIX}/usr/$(get_libdir)/${PN}"
- --docdir="${EPREFIX}${DOC_DIR}"
- --tutdir="${EPREFIX}${DOC_DIR}/examples/tutorials"
- --testdir="${EPREFIX}${DOC_DIR}/examples/tests"
- --disable-builtin-afterimage
- --disable-builtin-ftgl
- --disable-builtin-freetype
- --disable-builtin-glew
- --disable-builtin-lzma
- --disable-builtin-pcre
- --disable-builtin-zlib
- --disable-werror
- --enable-explicitlink
- --enable-shared
- --enable-soversion
- --fail-on-missing
- --nohowto
- --with-afs-shared=yes
- --with-sys-iconpath="${EPREFIX}/usr/share/pixmaps"
- # Invalid option '-mtune=native'. Try ./configure --help
- # --cflags=\"${CFLAGS}\"
- # --cxxflags=\"${CXXFLAGS}\"
- $(use_enable X x11)
- $(use_enable X asimage)
- $(use_enable X xft)
- $(use_enable afs)
- $(use_enable fits fitsio)
- $(use_enable fftw fftw3)
- $(use_enable gdml)
- $(use_enable geocad)
- $(use_enable graphviz gviz)
- $(use_enable http)
- $(use_enable kerberos krb5)
- $(use_enable ldap)
- $(use_enable math genvector)
- $(use_enable math gsl-shared)
- $(use_enable math mathmore)
- $(use_enable math minuit2)
- $(use_enable math roofit)
- $(use_enable math tmva)
- $(use_enable math vc)
- $(use_enable math vdt)
- $(use_enable math unuran)
- $(use_enable memstat)
- $(use_enable mysql)
- $(usex mysql "--with-mysql-incdir=${EPREFIX}/usr/include/mysql" "")
- $(use_enable odbc)
- $(use_enable opengl)
- $(use_enable oracle)
- $(use_enable postgres pgsql)
- $(use_enable prefix rpath)
- $(use_enable pythia6)
- $(use_enable pythia8)
- $(use_enable python)
- $(use_enable qt4 qt)
- $(use_enable qt4 qtgsi)
- $(use_enable R r)
- $(use_enable shadow shadowpw)
- $(use_enable sqlite)
- $(use_enable ssl)
- $(use_enable table)
- $(use_enable tiff astiff)
- $(use_enable xml)
- $(use_enable xrootd)
- $(use_enable zeroconf bonjour)
- ${EXTRA_ECONF}
- )
-
- # usex can't be used here, because pg_config may be not
- # installed with USE="-postgres"
- use postgres && myconf+=( --with-pgsql-incdir=$(pg_config --includedir) )
-
- einfo "Configuring with ${myconf[@]}"
- ./configure ${myconf[@]} || die "configure failed"
-}
-
-src_compile() {
- emake \
- OPT="${CXXFLAGS}" \
- F77OPT="${FFLAGS}" \
- ROOTSYS="${S}" \
- LD_LIBRARY_PATH="${S}/lib"
- use emacs && elisp-compile build/misc/*.el
-}
-
-daemon_install() {
- local daemons="rootd proofd"
- dodir /var/spool/rootd
- fowners rootd:rootd /var/spool/rootd
- dodir /var/spool/rootd/{pub,tmp}
- fperms 1777 /var/spool/rootd/{pub,tmp}
-
- local i
- for i in ${daemons}; do
- newinitd "${FILESDIR}"/${i}.initd ${i}
- newconfd "${FILESDIR}"/${i}.confd ${i}
- done
- if use xinetd; then
- insinto /etc/xinetd
- doins "${S}"/etc/daemons/{rootd,proofd}.xinetd
- fi
-}
-
-desktop_install() {
- cd "${S}"
- echo "Icon=root-system-bin" >> etc/root.desktop
- domenu etc/root.desktop
- doicon build/package/debian/root-system-bin.png
-
- insinto /usr/share/icons/hicolor/48x48/mimetypes
- doins build/package/debian/application-x-root.png
-
- insinto /usr/share/icons/hicolor/48x48/apps
- doicon build/package/debian/root-system-bin.xpm
-}
-
-cleanup_install() {
- # Cleanup of files either already distributed or unused on Gentoo
- pushd "${ED}" > /dev/null
- rm usr/share/root/fonts/LICENSE || die
- rm etc/root/proof/*.sample || die
- rm -r etc/root/daemons || die
- # these should be in PATH
- mv etc/root/proof/utils/pq2/pq2* usr/bin/ || die
- rm ${DOC_DIR#/}/INSTALL || die
- use examples || rm -r ${DOC_DIR#/}/examples || die
-
- # clean hardcoded sandbox paths
- #rm etc/root/dictpch/allCppflags.txt.tmp || die
- #sed -i "s|${S}/||" etc/root/cling/llvm/Config/llvm-config.h || die
- # regenerate pch for Gentoo headers layout
- #rm "etc/root/allDict.cxx.pch" || die
- #sed -i 's|etc/dictpch|etc/root/dictpch|' etc/root/dictpch/allLinkDefs.h || die
- #sed -i 's|etc/cling|etc/root/cling|' etc/root/dictpch/allHeaders.h || die
- #sed -i "s|ROOTDIR_TEMPLATE|${ED}|" etc/root/dictpch/makepch-gentoo.sh || die
- #etc/root/dictpch/makepch-gentoo.sh etc/root/allDict.cxx.pch || die "PCH generation failed"
-}
-
-src_install() {
- ROOTSYS="${S}" emake DESTDIR="${D}" install
- insinto "${DOC_DIR}"
- doins README.md
-
- echo "LDPATH=${EPREFIX%/}/usr/$(get_libdir)/root" > 99root
- use pythia8 && echo "PYTHIA8=${EPREFIX%/}/usr" >> 99root
-
- if use python; then
- echo "PYTHONPATH=${EPREFIX%/}/usr/$(get_libdir)/root" >> 99root
- python_optimize "${D}/usr/$(get_libdir)/root"
- fi
- use emacs && elisp-install ${PN} build/misc/*.{el,elc}
- doenvd 99root
-
- # The build system installs Emacs support unconditionally in the wrong
- # directory. Remove it and call elisp-install in case of USE=emacs.
- rm -r "${ED}"/usr/share/emacs || die
-
- daemon_install
- desktop_install
- cleanup_install
-
- # do not copress files used by ROOT's CLI (.credit, .demo, .license)
- docompress -x "${DOC_DIR}"/{CREDITS,examples/tutorials}
-}
-
-pkg_postinst() {
- fdo-mime_desktop_database_update
-
- # restort opencascade eselect slot
- if use geocad && [[ -n ${oc_current} ]]; then
- einfo "Switching to user set slot: $(eselect opencascade show) -> ${oc_current}"
- eselect opencascade set ${oc_current} > /dev/null || eerror "eselect opencascade set ${vlist[i]} failed!"
- unset oc_current
- fi
-}
-
-pkg_postrm() {
- fdo-mime_desktop_database_update
-}