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* fix quoting to a lot of patch callsMike Frysinger2017-01-201-1/+1
* sci-biology/rebase: Drop oldJustin Lecher2017-01-152-47/+0
* sci-biology/abyss: only openmpi is supportedMartin Mokrejš2017-01-151-7/+16
* sci-biology/mummer: Version bump to 3.9.4_alphaDavid Seifert2017-01-152-0/+84
* sci-biology/rebase: ppc stable wrt bug #604448Agostino Sarubbo2017-01-151-1/+1
* sci-biology/wgs-assembler: Drop oldPacho Ramos2017-01-154-212/+0
* sci-biology/mira: Removed unused patches.Lars Wendler2017-01-133-132/+0
* sci-biology/mira: Bump to EAPI-6. Ebuild cleanup.Lars Wendler2017-01-132-10/+39
* sci-biology/mira: Update flex-2.6.3 fix; add cmath headerNicholas Vinson2017-01-132-2/+18
* sci-biology/mira: Adjusted sys-devel/flex dependency.Lars Wendler2017-01-111-1/+1
* sci-biology/mira: Force rebuild of lexer C++ source filesNicholas Vinson2017-01-111-1/+12
* sci-biology/rebase: x86 stable wrt bug #604448Agostino Sarubbo2017-01-041-1/+1
* sci-biology/rebase: amd64 stable wrt bug #604448Agostino Sarubbo2017-01-041-2/+2
* sci-biology/rebase: Drop oldJustin Lecher2017-01-026-235/+0
* sci-biology/biopython: Drop oldJustin Lecher2017-01-024-154/+0
* sci-biology/rebase: Version BumpJustin Lecher2017-01-022-0/+47
* sci-biology/rebase: x86 stable wrt bug #590146Agostino Sarubbo2017-01-021-1/+1
* sci-biology/biopython: x86 stable wrt bug #584210Agostino Sarubbo2017-01-021-1/+1
* sci-biology/rebase: ppc stable wrt bug #590146Agostino Sarubbo2017-01-011-2/+2
* sci-biology/biopython: ppc stable wrt bug #584210Agostino Sarubbo2017-01-011-2/+2
* sci-biology/seqan: x86 stable wrt bug #525628Agostino Sarubbo2016-12-291-1/+1
* sci-biology/seqan: amd64 stable wrt bug #525628Aaron Bauman2016-12-261-1/+1
* sci-biology/clustal-omega: Version BumpJustin Lecher2016-12-232-0/+39
* sci-biology/abyss: Remove oldDavid Seifert2016-12-2011-310/+0
* sci-biology/rebase-1604-r0: stable on amd64Tobias Klausmann2016-12-201-1/+1
* sci-biology/bamtools: Remove oldDavid Seifert2016-12-154-104/+0
* sci-biology/bamtools: Version bump to 2.4.1David Seifert2016-12-144-0/+314
* sci-biology/seqan: Add blocker for older SLOTsDavid Seifert2016-12-141-17/+23
* sci-biology/rebase: Version BumpJustin Lecher2016-12-092-0/+47
* sci-biology/gmap: Clean metadata.xmlPacho Ramos2016-11-271-4/+0
* sci-biology/gmap: Drop old (#597984)Pacho Ramos2016-11-273-74/+0
* sci-biology/bedtools: This needs slot 0 of samtools (#597982)Pacho Ramos2016-11-271-1/+1
* sci-biology/treeviewx: Drop oldPacho Ramos2016-11-251-32/+0
* sci-biology/treeviewx: x86 stable, bug #584034Pacho Ramos2016-11-251-2/+2
* sci-biology/meme: Add $(DESTDIR) to install hooksDavid Seifert2016-11-201-1/+24
* sci-biology/meme: Version bump to 4.11.2_p2David Seifert2016-11-195-0/+872
* sci-biology/bioperl-run: Fix overlong DESCRIPTIONDavid Seifert2016-11-182-4/+4
* sci-biology/biogrep: Remove old ebuildsDavid Seifert2016-11-182-43/+0
* sci-biology/biogrep: Port to EAPI=6David Seifert2016-11-182-0/+37
* sci-biology/arb: Fix overlong DESCRIPTIONDavid Seifert2016-11-183-6/+6
* sci-biology/abyss: bump up to 2.0.2, bug #596018Sergei Trofimovich2016-11-063-1/+49
* global: Drop dead implementations from PYTHON_COMPATMichał Górny2016-11-014-4/+4
* Revert "Temporarily remove Manifest files that were at risk of having broken ...Michael Palimaka2016-10-311-0/+6
* Temporarily remove Manifest files that were at risk of having broken ChangeLo...Michael Palimaka2016-10-311-6/+0
* sci-biology/rebase: Bump to latest DBJustin Lecher2016-10-292-0/+47
* sci-biology/hmmer: Properly SLOT=2 hmmer-2.3.2David Seifert2016-10-093-0/+205
* sci-biology/hmmer: Version bump to 3.1_beta2David Seifert2016-10-094-0/+470
* sci-biology/tophat: Do not wrap scriptsDavid Seifert2016-10-031-2/+2
* sci-biology/samtools: Use 'python-single-r1' instead of 'python-r1'David Seifert2016-10-031-17/+21
* sci-biology/consed: Remove old ebuildsDavid Seifert2016-10-033-165/+0