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* sci-libs/shogun: Use HTTPSMichał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_learn: Use HTTPSMichał Górny2020-01-162-2/+2
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/shogun: Remove Python 2Michał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/Shapely: Remove Python 2Michał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_timeseries: Remove Python 2Michał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_timeseries: Remove oldMichał Górny2020-01-161-47/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_optimization: Remove Python 2Michał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_optimization: Remove oldMichał Górny2020-01-161-31/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/scikits_learn: Remove Python 2Michał Górny2020-01-163-3/+3
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/pymmlib: Permit numpy-python2Michał Górny2020-01-161-2/+5
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/plplot: Remove oldMichał Górny2020-01-168-830/+0
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/numkit: Remove Python 2Michał Górny2020-01-161-1/+1
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/nlopt: Permit numpy-python2Michał Górny2020-01-161-2/+5
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/mathgl: Permit numpy-python2Michał Górny2020-01-161-2/+8
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/libsigrok: Remove Python 2Michał Górny2020-01-164-4/+4
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/keras-preprocessing: Remove Python 2Michał Górny2020-01-162-2/+2
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/keras-applications: Remove Python 2Michał Górny2020-01-162-2/+2
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/getdata: Permit numpy-python2Michał Górny2020-01-161-2/+8
| | | | Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/libbraiding: new library for braid group computation.Michael Orlitzky2020-01-153-0/+60
| | | | | | | | | | François Bissey had an ebuild for the latest version of this package in the sage-on-gentoo overlay, so I've imported that after adding a few comments and an EAPI=7 bump. Closes: https://bugs.gentoo.org/705432 Package-Manager: Portage-2.3.79, Repoman-2.3.16 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/cddlib: new version 094j.Michael Orlitzky2020-01-153-8/+81
| | | | | | | | | | | | | | | | | | | | | | | | | François Bissey had an ebuild for the latest version of this package in the sage-on-gentoo overlay, so I've imported it with minor changes: * Updated to EAPI=7 (no related changes). * Dropped the unused autotools.eclass inherit. * Changed GPL-2 to GPL-2+, since the files that do have copyright headers have the "or any later version" bit. * Dropped the DOCS declaration; they're all covered by einstalldocs. * Added IUSE=examples. * Reworked the documentation/example installation logic. The new autotools build system installs everything by default, so if the user doesn't want something, we have to kill it from $ED. I've also added the upstream remote to metadata.xml, and added myself and François as maintainers in the future. SageMath uses two cddlib executables only present as of this version, so it's a prerequisite for moving more of SageMath into the tree. Closes: https://bugs.gentoo.org/705218 Package-Manager: Portage-2.3.79, Repoman-2.3.16 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/superlu_mt: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-2/+2
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/sundials: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-2/+2
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/klu: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-2/+2
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/hypre: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-2/+2
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/cantera: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-1/+1
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/btf: amd64 stable wrt bug #705134Agostino Sarubbo2020-01-141-2/+2
| | | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/voro++: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/superlu_mt: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/superlu: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/scalapack: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/nlopt: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/mumps: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/libaec: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-133-3/+3
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/levmar: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dmlc-core: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-131-1/+1
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/ceres-solver: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-132-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/ccfits: [QA] Fix HomepageInSrcUriDavid Seifert2020-01-132-2/+2
| | | | Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/votca-tools: version bumpChristoph Junghans2020-01-124-17/+78
| | | | | Package-Manager: Portage-2.3.79, Repoman-2.3.16 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/parmetis: Fix LICENSE, add mirror and bindist restrictions.Ulrich Müller2020-01-111-2/+3
| | | | | | Closes: https://bugs.gentoo.org/702362 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* sci-libs/metis: Fix LICENSE, add mirror and bindist restrictions.Ulrich Müller2020-01-111-2/+3
| | | | | | Closes: https://bugs.gentoo.org/702360 Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* sci-libs/cantera: add support sci-libs/sundials-5.0, dev-lang/python-3.8band-a-prend2020-01-062-3/+3
| | | | | | | | | Simple fix for Sundials-5.0 and Python-3.8 compatibility. The Sundials-5.0 has the same API as Sundials-4.x for CVODES function. Signed-off-by: Sergey Torokhov <torokhov-s-a@yandex.ru> Closes: https://github.com/gentoo/gentoo/pull/14126 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* */*: Switch sci-biology proj to cmake.eclassAndreas Sturmlechner2020-01-052-10/+9
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* */*: Clean PYTHON_COMPAT of obsolete implsMichał Górny2020-01-0561-121/+121
| | | | | Closes: https://github.com/gentoo/gentoo/pull/14246 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/dcmtk: version bump 3.6.5 and prefix fixHorea Christian2020-01-052-0/+90
| | | | | | | Package-Manager: Portage-2.3.78, Repoman-2.3.17 Signed-off-by: Horea Christian <chr@chymera.eu> Closes: https://github.com/gentoo/gentoo/pull/13913 Signed-off-by: Joonas Niilola <juippis@gentoo.org>
* sci-libs/indilib: 1.8.3 version bumpAndreas Sturmlechner2020-01-042-0/+57
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/scipy: Remove oldDavid Seifert2020-01-038-666/+0
| | | | | | Closes: https://github.com/gentoo/gentoo/pull/14188 Package-Manager: Portage-2.3.83, Repoman-2.3.20 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/opencascade: Switch to cmake.eclassAndreas Sturmlechner2020-01-031-5/+5
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/med: Switch to cmake.eclassAndreas Sturmlechner2020-01-031-6/+6
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/lrslib: Drop 042c-r2 and 051Andreas Sturmlechner2020-01-033-106/+0
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/pgplot: Drop 5.2.2-r6Andreas Sturmlechner2020-01-031-180/+0
| | | | | Package-Manager: Portage-2.3.84, Repoman-2.3.20 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>