From d8604b22be0a1830f994501fc5dffbf53dac94d2 Mon Sep 17 00:00:00 2001 From: Huang Rui Date: Sun, 7 Aug 2022 23:50:22 +0800 Subject: sci-mathematics/mathematica: add 13.0.1 Fix ebuild QA problem and add missing RDEPEND Add cuda use flag and nvidia-cuda-toolkit RDEPEND Add R use flag and dev-lang/R RDEPEND Fix RPATH and add dev-util/patchelf as BDEPEND Add QT_QPA_PLATFORM="wayland;xcb" to fix problem on wayland Disable doc use flag by default Install icons from SystemFiles/FrontEnd/SystemResources/X Add myself as a maintainer (proxy-maint) Closes: https://bugs.gentoo.org/859793 Signed-off-by: Huang Rui Signed-off-by: Andrew Ammerlaan --- sci-mathematics/mathematica/Manifest | 1 + .../mathematica/mathematica-13.0.1.ebuild | 160 +++++++++++++++++++++ sci-mathematics/mathematica/metadata.xml | 28 +++- 3 files changed, 185 insertions(+), 4 deletions(-) create mode 100644 sci-mathematics/mathematica/mathematica-13.0.1.ebuild diff --git a/sci-mathematics/mathematica/Manifest b/sci-mathematics/mathematica/Manifest index ed9457c860c2..e465fb6c5a09 100644 --- a/sci-mathematics/mathematica/Manifest +++ b/sci-mathematics/mathematica/Manifest @@ -3,3 +3,4 @@ DIST Mathematica_12.1.0_LINUX.sh 5889770327 BLAKE2B b0e637714f376d4066d5e484ef9f DIST Mathematica_12.1.1_LINUX.sh 4438946649 BLAKE2B 473f814a3e0686bb3a6ac1f49c887842bc17db11439b65c1dad1dae8cd5797e6762d94bccdf156f6f9ba1edb9a16ed5172936a6884d2f0f98c29808214b1eabe SHA512 5cfdd91bae9bad53afe405b40759732589119256c3f785058808b20faf21f593d90bf7bb2dbaccf3e983aa84ff380a1fa6d40fd63f5ba17109c1cd6818c63490 DIST Mathematica_12.2.0_LINUX.sh 4454613844 BLAKE2B 03b0567afe001fd0781ea6daf0f23ccaccf44ed6ce225cc190239d228c684099a1fa1070cedc0c5bf1517804a4b8b34903d56b2b028392895437a304b56f682d SHA512 0b98d0f2a15ea834892897a64089da08bee5783a8a51b1a0e624618105c896c91c865cca5b5c7b8e72569a5065ef091be7138b7d72d94e4697a213a91d5b8770 DIST Mathematica_13.0.0_BNDL_LINUX.sh 5118155611 BLAKE2B ff15a9def53f7fb808b117ecf2573f415b928c13a86d15634e6282c8f8542b32fa42ff76baeac95faa1242dc4350b0db28231c5cb7f36bc5b57425c2804bf996 SHA512 05008559c531a6920745d0047be0f2c42cb6994309db3f2ee2ad44151655f43d88de063a4952c5ac5544818e2da8973305ee46f44e74d7301da21cdf710cbd5b +DIST Mathematica_13.0.1_BNDL_LINUX.sh 5094982487 BLAKE2B 55375b6038422fd5f11db36b33bc1162064c8d6a88575c982ce53b15678bf7b19dc62d66336b2105cbaa18a7fe86ba64f09db40e494c15d558f3ebd92ea025fe SHA512 cf4106202dfcf290f0dbe9e8062457eb705c2802f608e60f2810fc31e166ab60b5726c0c9bf675fadb02f5628af1dc2d25db8d02119dc63381eef8a88cdb6ec6 diff --git a/sci-mathematics/mathematica/mathematica-13.0.1.ebuild b/sci-mathematics/mathematica/mathematica-13.0.1.ebuild new file mode 100644 index 000000000000..128562af249c --- /dev/null +++ b/sci-mathematics/mathematica/mathematica-13.0.1.ebuild @@ -0,0 +1,160 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +CHECKREQS_DISK_BUILD=19G +inherit check-reqs desktop unpacker xdg + +DESCRIPTION="Wolfram Mathematica" +SRC_URI="Mathematica_${PV}_BNDL_LINUX.sh" +HOMEPAGE="https://www.wolfram.com/mathematica/" + +LICENSE="all-rights-reserved" +KEYWORDS="-* ~amd64" +SLOT="0" +IUSE="cuda doc R" + +RESTRICT="strip mirror bindist fetch" + +# Mathematica comes with a lot of bundled stuff. We should place here only what we +# explicitly override with LD_PRELOAD. +# RLink (libjri.so) requires dev-lang/R +RDEPEND=" + cuda? ( dev-util/nvidia-cuda-toolkit ) + media-libs/freetype + R? ( dev-lang/R ) + virtual/libcrypt +" + +DEPEND=" + ${RDEPEND} +" + +BDEPEND=" + dev-util/patchelf +" + +# we need this a few times +MPN="Mathematica" +MPV=$(ver_cut 1-2) +M_BINARIES="MathKernel Mathematica WolframKernel wolframscript math mathematica mcc wolfram" +M_TARGET="opt/Wolfram/${MPN}/${MPV}" + +# we might as well list all files in all QA variables... +QA_PREBUILT="opt/*" + +S=${WORKDIR} + +src_unpack() { + /bin/sh "${DISTDIR}/${A}" --nox11 --keep --target "${S}/unpack" -- "-help" || die +} + +src_prepare() { + pushd "${S}/unpack" > /dev/null || die + # fix ACCESS DENIED issue when installer check the avahi-daemon + sed -e "s|avahi-daemon -c|true|g" -i "Unix/Installer/MathInstaller" || die + /bin/sh "Unix/Installer/MathInstaller" -auto "-targetdir=${S}/${M_TARGET}" "-execdir=${S}/opt/bin" || die + popd > /dev/null || die + eapply_user +} + +src_install() { + local ARCH='-x86-64' + + if ! use doc; then + einfo "Removing documentation" + rm -r "${S}/${M_TARGET}/Documentation" || die + fi + + einfo 'Removing MacOS- and Windows-specific files' + find "${S}/${M_TARGET}" -type d -\( -name Windows -o -name Windows-x86-64 \ + -o -name MacOSX -o -name MacOSX-x86-64 -o -name Macintosh -\) \ + -exec rm -rv {} + || die + + if ! use cuda; then + einfo 'Removing cuda support' + rm -r "${S}/${M_TARGET}/SystemFiles/Components/CUDACompileTools/LibraryResources/Linux-x86-64/CUDAExtensions.so" || die + fi + + # Linux-x86-64/AllVersions is the supported version, other versions remove + einfo 'Removing unsupported RLink versions' + rm -r "${S}/${M_TARGET}/SystemFiles/Links/RLink/SystemFiles/Libraries/Linux-x86-64/3.5.0" || die + rm -r "${S}/${M_TARGET}/SystemFiles/Links/RLink/SystemFiles/Libraries/Linux-x86-64/3.6.0" || die + rm -r "${S}/${M_TARGET}/SystemFiles/Links/RLink/SystemFiles/Libraries/Linux/AllVersions" || die + if ! use R; then + einfo 'Removing RLink support' + rm -r "${S}/${M_TARGET}/SystemFiles/Links/RLink/SystemFiles/Libraries/Linux-x86-64/AllVersions/libjri.so" || die + fi + + # fix RPATH + while IFS= read -r -d '' i; do + # Use \x7fELF header to separate ELF executables and libraries + # Skip .o files and static files to avoid surprises + [[ $(od -t x1 -N 4 "${i}") == *"7f 45 4c 46"* ]] || continue + [[ -f "${i}" && "${i: -2}" != ".o" ]] || continue + [[ "$(file "${i}")" == *"dynamically"* ]] || continue + einfo "Fixing RPATH of ${i}" + patchelf --set-rpath \ +'/'"${M_TARGET}"'/SystemFiles/Libraries/Linux-x86-64:'\ +'/'"${M_TARGET}"'/SystemFiles/Libraries/Linux-x86-64/Qt/lib:'\ +'/'"${M_TARGET}"'/SystemFiles/Java/Linux-x86-64/lib:'\ +'/'"${M_TARGET}"'/SystemFiles/Java/Linux-x86-64/lib/jli:'\ +'$ORIGIN' "${i}" || \ + die "patchelf failed on ${i}" + done < <(find "${S}/${M_TARGET}" -type f -print0) + + # fix broken symbolic link + ln -sf "/${M_TARGET}/SystemFiles/Kernel/Binaries/Linux-x86-64/wolframscript" "${S}/${M_TARGET}/Executables/wolframscript" || die + + # move all over + mv "${S}"/opt "${ED}"/opt || die + + # the autogenerated symlinks point into sandbox, remove + rm "${ED}"/opt/bin/* || die + + # install wrappers instead + for name in ${M_BINARIES} ; do + einfo "Generating wrapper for ${name}" + echo '#!/bin/sh' >> "${T}/${name}" || die + echo 'QT_QPA_PLATFORM="wayland;xcb"' >> "${T}/${name}" || die + echo "LD_PRELOAD=/usr/$(get_libdir)/libfreetype.so.6:/$(get_libdir)/libz.so.1:/$(get_libdir)/libcrypt.so.1 /${M_TARGET}/Executables/${name} \$*" \ + >> "${T}/${name}" || die + dobin "${T}/${name}" + done + for name in ${M_BINARIES} ; do + einfo "Symlinking ${name} to /opt/bin" + dosym ../../usr/bin/${name} /opt/bin/${name} + done + + # fix some embedded paths and install desktop files + for filename in $(find "${ED}/${M_TARGET}/SystemFiles/Installation" -name "wolfram-mathematica*.desktop") ; do + einfo "Fixing ${filename}" + sed -e "s|${S}||g" -e 's|^\t\t||g' -i "${filename}" || die + echo "Categories=Physics;Science;Engineering;2DGraphics;Graphics;" >> "${filename}" || die + domenu "${filename}" + done + + # install icons + for iconsize in 16 32 64 128 256; do + local iconfile="${ED}/${M_TARGET}/SystemFiles/FrontEnd/SystemResources/X/App-${iconsize}.png" + if [ -e "${iconfile}" ]; then + newicon -s "${iconsize}" "${iconfile}" wolfram-mathematica.png + fi + done + + # install mime types + insinto /usr/share/mime/application + for filename in $(find "${ED}/${M_TARGET}/SystemFiles/Installation" -name "application-*.xml"); do + basefilename=$(basename "${filename}") + mv "${filename}" "${T}/${basefilename#application-}" || die + doins "${T}/${basefilename#application-}" + done +} + +pkg_nofetch() { + einfo "Please place the Wolfram Mathematica installation file ${SRC_URI}" + einfo "in your \$\{DISTDIR\}." + einfo "Note that to actually run and use Mathematica you need a valid license." + einfo "Wolfram provides time-limited evaluation licenses at ${HOMEPAGE}" +} diff --git a/sci-mathematics/mathematica/metadata.xml b/sci-mathematics/mathematica/metadata.xml index 71a5bee94e5a..90d6c3bbe4c6 100644 --- a/sci-mathematics/mathematica/metadata.xml +++ b/sci-mathematics/mathematica/metadata.xml @@ -1,8 +1,28 @@ - - dilfridge@gentoo.org - Andreas K. Huettel - + + dilfridge@gentoo.org + Andreas K. Huettel + + + vowstar@gmail.com + Huang Rui + + + proxy-maint@gentoo.org + Proxy Maintainers + + + Wolfram Mathematica is a software system with built-in libraries for + several areas of technical computing that allow machine learning, + statistics, symbolic computation, data manipulation, network analysis, + time series analysis, plotting functions and various types of data, + implementation of algorithms, creation of user interfaces, and interfacing + with programs written in other programming languages. + + + Install with cuda support + Enable dev-lang/R backend support + -- cgit v1.2.3-65-gdbad