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# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
DESCRIPTION="Amino acid indices and similarity matrices"
LICENSE="public-domain"
HOMEPAGE="http://www.genome.ad.jp/aaindex"
SRC_URI="mirror://gentoo/${P}.tar.bz2"
SLOT="0"
# Minimal build keeps only the indexed files (if applicable) and the
# documentation. The non-indexed database is not installed.
IUSE="emboss minimal"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
DEPEND="emboss? ( sci-biology/emboss )"
RDEPEND="${DEPEND}"
src_compile() {
if use emboss; then
mkdir AAINDEX
echo
einfo "Indexing AAindex for usage with EMBOSS."
EMBOSS_DATA="." aaindexextract -auto -infile ${PN}1 || die \
"Indexing AAindex failed."
echo
fi
}
src_install() {
if ! use minimal; then
insinto /usr/share/${PN}
doins ${PN}{1,2,3} || die "Failed to install raw database."
fi
dodoc ${PN}.doc || die "Failed to install documentation."
if use emboss; then
insinto /usr/share/EMBOSS/data/AAINDEX
doins AAINDEX/* || die "Failed to install EMBOSS data files."
fi
}
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