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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=6
inherit toolchain-funcs
DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
HOMEPAGE="http://bio-bwa.sourceforge.net/"
SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2"
LICENSE="GPL-3"
SLOT="0"
IUSE=""
KEYWORDS="~amd64 ~x86 ~x64-macos"
RDEPEND="dev-lang/perl"
DOCS=( NEWS.md README-alt.md README.md )
PATCHES=( "${FILESDIR}"/${P}-Makefile.patch )
src_configure() {
tc-export CC AR
default
}
src_install() {
dobin bwa
doman bwa.1
exeinto /usr/libexec/${PN}
doexe qualfa2fq.pl xa2multi.pl
einstalldocs
}
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