diff options
40 files changed, 0 insertions, 1766 deletions
diff --git a/dev-python/astropy-helpers/Manifest b/dev-python/astropy-helpers/Manifest deleted file mode 100644 index 6cfc4c9..0000000 --- a/dev-python/astropy-helpers/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST astropy-helpers-1.1.1.tar.gz 132083 SHA256 2da74e8e6b08f3c378fc5f863460bc5c45f4f08e47ed2887cff0a26692aadd4b SHA512 432580de37583b6195b6827dae46516553ceba71bfc038bb609bd59f158f3eb082925dc03f7d9b8ef10d9da68e0d40ee0fa0dc915d72ee0391d58d851a7114bf WHIRLPOOL a64b950acb452307e2f43206c2ff6d102856c0c60a7d4058a59ab8c82338692fee4e432d7dea78b865dea2401536a101713615079c3a1eafbfb4b8c034f57047 diff --git a/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild b/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild deleted file mode 100644 index fd68055..0000000 --- a/dev-python/astropy-helpers/astropy-helpers-1.1.1.ebuild +++ /dev/null @@ -1,23 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_{3,4,5} ) - -inherit distutils-r1 - -DESCRIPTION="Helpers for Astropy and Affiliated packages" -HOMEPAGE="https://github.com/astropy/astropy-helpers" -SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~x86 ~x86-linux" - -python_prepare_all() { - sed -e '/import ah_bootstrap/d' -i setup.py || die "Removing ah_bootstrap failed" - distutils-r1_python_prepare_all -} diff --git a/dev-python/astropy-helpers/metadata.xml b/dev-python/astropy-helpers/metadata.xml deleted file mode 100644 index 845f41e..0000000 --- a/dev-python/astropy-helpers/metadata.xml +++ /dev/null @@ -1,16 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> - astropy-helpers is a collection of build tools used by astropy - that may be used by other projects. - </longdescription> - <upstream> - <remote-id type="pypi">astropy-helpers</remote-id> - <remote-id type="github">astropy/astropy-helpers</remote-id> - </upstream> -</pkgmetadata> diff --git a/dev-python/astropy/Manifest b/dev-python/astropy/Manifest deleted file mode 100644 index 591f179..0000000 --- a/dev-python/astropy/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST astropy-1.1.1.tar.gz 8157305 SHA256 4d2e7a8bd5191a66d7e1a52beefb4a0b6f496a1e9e8212422613219cb514769f SHA512 bc3c370da32d5f0098dbfc2808dba9d4d4424d3dcfba4d7ffd84b39569387b79ad93086e10678c259237f9cfe1229725501d0dc4eba51c9d01a4cd8a72024fb4 WHIRLPOOL 5b40955f56e6f080ad93b224eabd345565ef9f5e7f5ccb00e2737bd714117bc9b35922a044fe4ccaddb9d30fa72e13dd560577392120bfbd0a9d10c8aaa5aa01 diff --git a/dev-python/astropy/astropy-1.1.1.ebuild b/dev-python/astropy/astropy-1.1.1.ebuild deleted file mode 100644 index cbe1283..0000000 --- a/dev-python/astropy/astropy-1.1.1.ebuild +++ /dev/null @@ -1,88 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_{4,5} ) - -inherit distutils-r1 - -DESCRIPTION="Core functionality for performing astrophysics with Python" -HOMEPAGE="http://astropy.org/" -SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc test" - -RDEPEND=" - >=dev-libs/expat-2.1.0:0= - dev-python/configobj[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/ply[${PYTHON_USEDEP}] - dev-python/six[${PYTHON_USEDEP}] - >=sci-astronomy/erfa-1.2:0= - >=sci-astronomy/wcslib-5:0= - >=sci-libs/cfitsio-3.360:0= - sys-libs/zlib:0=" -DEPEND="${RDEPEND} - >=dev-python/astropy-helpers-1.1[${PYTHON_USEDEP}] - dev-python/cython[${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - virtual/pkgconfig - doc? ( - dev-python/matplotlib[${PYTHON_USEDEP}] - dev-python/sphinx[${PYTHON_USEDEP}] - media-gfx/graphviz - ) - test? ( - dev-libs/libxml2[${PYTHON_USEDEP}] - dev-python/pytest[${PYTHON_USEDEP}] - dev-python/h5py[${PYTHON_USEDEP}] - dev-python/matplotlib[${PYTHON_USEDEP}] - sci-libs/scipy[${PYTHON_USEDEP}] - )" - -PATCHES=( - "${FILESDIR}/${PN}-1.0.4-system-six.patch" - "${FILESDIR}/${PN}-1.0.4-system-configobj.patch" - "${FILESDIR}/${PN}-1.1.1-fix-wcs.patch" - "${FILESDIR}/${PN}-1.1.1-mark-kown-failures.patch" -) - -python_prepare_all() { - export mydistutilsargs="--offline" - export ASTROPY_USE_SYSTEM_PYTEST=True - rm -r ${PN}_helpers || die - cp "${FILESDIR}"/astropy-ply.py astropy/extern/ply.py || die - rm -r cextern/{expat,erfa,cfitsio,wcslib} || die - sed -i -e '/auto_use/s/True/False/' setup.cfg || die - cat >> setup.cfg <<-EOF - - [build] - use_system_libraries=1 - EOF - - distutils-r1_python_prepare_all -} - -python_compile_all() { - if use doc; then - python_export_best - VARTEXFONTS="${T}"/fonts \ - MPLCONFIGDIR="${BUILD_DIR}" \ - PYTHONPATH="${BUILD_DIR}"/lib \ - esetup.py build_sphinx - fi -} - -python_test() { - esetup.py test -} - -python_install_all() { - use doc && local HTML_DOCS=( docs/_build/html/. ) - distutils-r1_python_install_all -} diff --git a/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch b/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch deleted file mode 100644 index 9578c0d..0000000 --- a/dev-python/astropy/files/astropy-1.0.4-system-configobj.patch +++ /dev/null @@ -1,14 +0,0 @@ -diff -ur astropy-0.4.1/astropy/config/configuration.py astropy-0.4.1.configobj/astropy/config/configuration.py ---- astropy-0.4.1/astropy/config/configuration.py 2014-09-01 22:41:30.066853605 +0200 -+++ astropy-0.4.1.configobj/astropy/config/configuration.py 2014-09-01 22:40:50.793528942 +0200 -@@ -23,7 +23,8 @@ - import types - from warnings import warn - --from ..extern.configobj import configobj, validate -+import configobj -+import validate - from ..utils.exceptions import AstropyWarning, AstropyDeprecationWarning - from ..utils import find_current_module - from ..utils.misc import InheritDocstrings - diff --git a/dev-python/astropy/files/astropy-1.0.4-system-six.patch b/dev-python/astropy/files/astropy-1.0.4-system-six.patch deleted file mode 100644 index 8bfab98..0000000 --- a/dev-python/astropy/files/astropy-1.0.4-system-six.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -ur astropy-0.4.1/astropy/extern/six.py astropy-0.4.1.six/astropy/extern/six.py ---- astropy-0.4.1/astropy/extern/six.py 2014-09-01 21:57:56.663393218 +0200 -+++ astropy-0.4.1.six/astropy/extern/six.py 2014-09-01 21:59:02.940933294 +0200 -@@ -13,7 +13,7 @@ - # Update this to prevent Astropy from using its bundled copy of six - # (but only if some other version of at least _SIX_MIN_VERSION can - # be provided) --_SIX_SEARCH_PATH = ['astropy.extern.bundled.six', 'six'] -+_SIX_SEARCH_PATH = ['six', 'astropy.extern.bundled.six'] - - - def _find_module(name, path=None): diff --git a/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch b/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch deleted file mode 100644 index efb1273..0000000 --- a/dev-python/astropy/files/astropy-1.1.1-fix-wcs.patch +++ /dev/null @@ -1,15 +0,0 @@ -Author: Kacper Kowalik <xarthisius.kk@gmail.com> -Description: Copy keys to a list, since orignal map is modified -Url: https://github.com/astropy/astropy/issues/4477 -Bug: https://github.com/astropy/astropy/issues/4460 ---- a/astropy/wcs/wcs.py -+++ b/astropy/wcs/wcs.py -@@ -988,7 +988,7 @@ - """ - # Never pass SIP coefficients to wcslib - # CTYPE must be passed with -SIP to wcslib -- for key in (m.group() for m in map(SIP_KW.match, header.keys()) -+ for key in (m.group() for m in map(SIP_KW.match, list(header)) - if m is not None): - del header[key] - diff --git a/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch b/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch deleted file mode 100644 index 2e2c82a..0000000 --- a/dev-python/astropy/files/astropy-1.1.1-mark-kown-failures.patch +++ /dev/null @@ -1,99 +0,0 @@ -Author: Ole Streicher <olebole@debian.org> -Description: Mark all known test failures as xfail. - These failures have been discussed with upstream. ---- a/astropy/io/fits/tests/test_connect.py -+++ b/astropy/io/fits/tests/test_connect.py -@@ -136,6 +136,8 @@ - # while reading is to check whether col.null is present. For float columns, col.null - # is not initialized - -+# see https://github.com/astropy/astropy/issues/3415 -+ @pytest.mark.xfail() - def test_read_from_fileobj(self, tmpdir): - filename = str(tmpdir.join('test_read_from_fileobj.fits')) - hdu = BinTableHDU(self.data) -@@ -172,6 +174,8 @@ - def setup_method(self, method): - warnings.filterwarnings('always') - -+# see https://github.com/astropy/astropy/issues/3415 -+ @pytest.mark.xfail() - def test_read(self, tmpdir): - filename = str(tmpdir.join('test_read.fits')) - self.hdus.writeto(filename) -@@ -189,6 +193,8 @@ - Table.read(filename, hdu=0) - assert exc.value.args[0] == 'No table found in hdu=0' - -+# see https://github.com/astropy/astropy/issues/3415 -+ @pytest.mark.xfail() - @pytest.mark.parametrize('hdu', [1, 'first']) - def test_read_with_hdu_1(self, tmpdir, hdu): - filename = str(tmpdir.join('test_read_with_hdu_1.fits')) ---- a/astropy/wcs/wcs.py -+++ b/astropy/wcs/wcs.py -@@ -84,6 +84,8 @@ - if six.PY3 or platform.system() == 'Windows': - __doctest_skip__ = ['WCS.all_world2pix'] - -+# see https://github.com/astropy/astropy/issues/3380 -+__doctest_skip__ = ['WCS.all_world2pix'] - - if _wcs is not None: - WCSBase = _wcs._Wcs ---- a/astropy/tests/tests/test_socketblocker.py -+++ b/astropy/tests/tests/test_socketblocker.py -@@ -66,8 +66,8 @@ - def _square(x): - return x ** 2 - -- --@pytest.mark.skipif('not PY3_4 or sys.platform == "win32" or sys.platform.startswith("gnu0")') -+# see https://github.com/astropy/astropy/issues/4193 -+@pytest.mark.skipif(True, reason="Blocks on Debian CI test") - def test_multiprocessing_forkserver(): - """ - Test that using multiprocessing with forkserver works. Perhaps ---- a/astropy/coordinates/tests/test_api_ape5.py -+++ b/astropy/coordinates/tests/test_api_ape5.py -@@ -319,7 +319,8 @@ - # coordinate object, and one that returns a cartesian matrix but does *not* - # require `newobj` or `fk5frame` - this allows optimization of the transform. - -- -+# Temporary mark until scipy/numpy is fully on 3.5 -+@pytest.mark.xfail() - def test_highlevel_api(): - J2001 = time.Time('J2001', scale='utc') - ---- a/astropy/visualization/tests/test_histogram.py -+++ b/astropy/visualization/tests/test_histogram.py -@@ -50,6 +50,8 @@ - assert patches2[0].axes is ax[1] - - -+# see https://github.com/astropy/astropy/issues/4329 -+@pytest.mark.xfail() - @pytest.mark.skipif('not HAS_PLT') - def test_hist_autobin(rseed=0): - rng = np.random.RandomState(rseed) ---- a/astropy/table/tests/test_info.py -+++ b/astropy/table/tests/test_info.py -@@ -6,6 +6,7 @@ - import warnings - import numpy as np - -+from ...tests.helper import pytest - from ...extern import six - from ... import units as u - from ... import time -@@ -225,7 +226,8 @@ - t.info(out=out) - assert out.getvalue().splitlines() == exp - -- -+# see https://github.com/astropy/astropy/issues/4336 -+@pytest.mark.xfail() - def test_ignore_warnings(): - t = table.Table([[np.nan, np.nan]]) - with warnings.catch_warnings(record=True) as warns: diff --git a/dev-python/astropy/files/astropy-ply.py b/dev-python/astropy/files/astropy-ply.py deleted file mode 100644 index 19eb104..0000000 --- a/dev-python/astropy/files/astropy-ply.py +++ /dev/null @@ -1,58 +0,0 @@ -# Licensed under a 3-clause BSD style license - see LICENSE.rst - -""" -Handle loading ply package from system or from the bundled copy -""" - -import imp -from distutils.version import StrictVersion - - -def _find_module(name, path=None): - """ - Alternative to `imp.find_module` that can also search in subpackages. - """ - - parts = name.split('.') - - for part in parts: - if path is not None: - path = [path] - - fh, path, descr = imp.find_module(part, path) - - return fh, path, descr - -_PLY_MIN_VERSION = StrictVersion('3.4') - -# Update this to prevent Astropy from using its bundled copy of ply -# (but only if some other version of at least _PLY_MIN_VERSION can -# be provided) -_PLY_SEARCH_PATH = ['ply'] - - -for mod_name in _PLY_SEARCH_PATH: - try: - mod_info = _find_module(mod_name) - #mod_lex_info = _find_module(mod_name + '.lex') - except ImportError: - continue - - mod = imp.load_module(__name__, *mod_info) - #mod_lex = imp.load_module(__name__ + '.lex', *mod_lex_info) - - try: - # if StrictVersion(mod_lex.__version__) >= _PLY_MIN_VERSION: - # break - break - except (AttributeError, ValueError): - # Attribute error if the ply module isn't what it should be and doesn't - # have a .__version__; ValueError if the version string exists but is - # somehow bogus/unparseable - continue -else: - raise ImportError( - "Astropy requires the 'ply' module of minimum version {0}; " - "normally this is bundled with the astropy package so if you get " - "this warning consult the packager of your Astropy " - "distribution.".format(_PLY_MIN_VERSION)) diff --git a/dev-python/astropy/metadata.xml b/dev-python/astropy/metadata.xml deleted file mode 100644 index 85615ff..0000000 --- a/dev-python/astropy/metadata.xml +++ /dev/null @@ -1,16 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> - Astropy is a community-driven package intended to contain much of - the core functionality and some common tools needed for performing - astronomy and astrophysics with Python. -</longdescription> - <upstream> - <remote-id type="pypi">astropy</remote-id> - </upstream> -</pkgmetadata> diff --git a/profiles/categories b/profiles/categories index 8f766f0..ac988d3 100644 --- a/profiles/categories +++ b/profiles/categories @@ -1,4 +1,2 @@ -dev-python net-fs -dev-libs sci-libs diff --git a/profiles/use.local.desc b/profiles/use.local.desc index bf12bd7..3ade6d7 100644 --- a/profiles/use.local.desc +++ b/profiles/use.local.desc @@ -2,9 +2,6 @@ # your descriptions to your package's metadata.xml ONLY. # * generated automatically using egencache * -dev-libs/starpu:cuda - Enable NVIDIA CUDA toolkit support -dev-libs/starpu:gcc-plugin - Enable GCC extension plugin (experimental) -dev-libs/starpu:opencl - Enable OpenCL support net-fs/cvmfs:aufs - Use AUFS instead of OverlayFS for the server net-fs/cvmfs:server - Install the CVMFS server (needs apache and OverlayFS) net-fs/cvmfs:test-programs - Install unit test programs diff --git a/sci-astronomy/wcslib/Manifest b/sci-astronomy/wcslib/Manifest deleted file mode 100644 index 4e8332d..0000000 --- a/sci-astronomy/wcslib/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST wcslib-5.14.tar.bz2 2221717 SHA256 4d3f12d2636bb75488eaaa3ed435d7664d2c26a73a67ac1f7d5f3e530f39e37f SHA512 431693cffcc7a9f2b29040a34f7dbac2f3360b094a42467f7378523c15260ffb3c0ad330e07077a40bf694956fae2371550d6583580f0bcc16ec47f9fbc5bc28 WHIRLPOOL 2acf5040b4960c001b7076189c1da4dd6b327257295dcdfa8a89d553a93f0980b0e62d66aec244a9cc8af70cc62b0497362839f26bb6cc6517e219ba55b73e93 diff --git a/sci-astronomy/wcslib/metadata.xml b/sci-astronomy/wcslib/metadata.xml deleted file mode 100644 index a599762..0000000 --- a/sci-astronomy/wcslib/metadata.xml +++ /dev/null @@ -1,23 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> - </maintainer> - <longdescription lang="en"> - WCSLIB is a C library, supplied with a full set of Fortran wrappers, - that implements the "World Coordinate System" (WCS) convention in FITS - (Flexible Image Transport System). It also includes a PGPLOT-based routine, - PGSBOX, for drawing general curvilinear coordinate graticules and a number of - utility programs. -</longdescription> - <use> - <flag name="fits"> - Enable support for the FITS format through <pkg>sci-libs/cfitsio</pkg> - </flag> - <flag name="pgplot"> - Builds PGBSOX routines, needs <pkg>sci-libs/pgplot</pkg> library - </flag> - </use> -</pkgmetadata> diff --git a/sci-astronomy/wcslib/wcslib-5.14.ebuild b/sci-astronomy/wcslib/wcslib-5.14.ebuild deleted file mode 100644 index e05fe6f..0000000 --- a/sci-astronomy/wcslib/wcslib-5.14.ebuild +++ /dev/null @@ -1,72 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=6 - -FORTRAN_NEEDED=fortran - -inherit fortran-2 - -DESCRIPTION="Astronomical World Coordinate System transformations library" -HOMEPAGE="http://www.atnf.csiro.au/people/mcalabre/WCS/" -SRC_URI="ftp://ftp.atnf.csiro.au/pub/software/${PN}/${P}.tar.bz2" - -SLOT="0/5" -LICENSE="LGPL-3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc fortran fits pgplot static-libs +tools" - -RDEPEND=" - fits? ( sci-libs/cfitsio:0= ) - pgplot? ( sci-libs/pgplot:0= )" -DEPEND="${RDEPEND} - sys-devel/flex - virtual/pkgconfig" - -src_configure() { - local myconf=( - --docdir="${EPREFIX}"/usr/share/doc/${PF} - --htmldir="${EPREFIX}"/usr/share/doc/${PF} - $(use_enable fortran) - $(use_enable tools utils) - ) - # hacks because cfitsio and pgplot directories are hard-coded - if use fits; then - myconf+=( - --with-cfitsioinc="${EPREFIX}/usr/include" - --with-cfitsiolib="${EPREFIX}/usr/$(get_libdir)" - ) - else - myconf+=( --without-cfitsio ) - fi - if use pgplot; then - myconf+=( - --with-pgplotinc="${EPREFIX}/usr/include" - --with-pgplotlib="${EPREFIX}/usr/$(get_libdir)" - ) - else - myconf+=( --without-pgplot ) - fi - econf ${myconf[@]} - sed -i -e 's/COPYING\*//' GNUmakefile || die -} - -src_compile() { - # nasty makefile, debugging means probably full rewrite - emake -j1 -} - -src_test() { - emake -j1 check -} - -src_install () { - default - # static libs share the same symbols as shared (i.e. compiled with PIC) - # so they are not compiled twice - use static-libs || rm "${ED}"/usr/$(get_libdir)/lib*.a - use doc || rm -r \ - "${ED}"/usr/share/doc/${PF}/html \ - "${ED}"/usr/share/doc/${PF}/*.pdf -} diff --git a/sci-astronomy/wcstools/Manifest b/sci-astronomy/wcstools/Manifest deleted file mode 100644 index 7c408e4..0000000 --- a/sci-astronomy/wcstools/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST wcstools-3.9.2.tar.gz 8523655 SHA256 481fe357cf755426fb8e25f4f890e827cce5de657a4e5044d4e31ce27bef1c8b SHA512 b9030cdcaf3f87ab761362a2b8c4a76557694ec4e683371a05e8d58823179d320a2859e883c4ca2c3d65d5adb70ad1ac859587f4c210cd315ced26288fbe107a WHIRLPOOL 257e54e5c545a0584c9ff52f2e3298db73f7d1b4e8d71e0621db18aed8f138dbb0093773883351cbb56ea8a35998ec3b0a2b8e7fc5334dc8d2ebb1c3c4410af4 diff --git a/sci-astronomy/wcstools/files/Makefile.am b/sci-astronomy/wcstools/files/Makefile.am deleted file mode 100644 index 46abf6d..0000000 --- a/sci-astronomy/wcstools/files/Makefile.am +++ /dev/null @@ -1,73 +0,0 @@ -SUBDIRS = libwcs -INCLUDES = -I$(top_srcdir)/libwcs - -pkgconfigdir = $(libdir)/pkgconfig -pkgconfig_DATA = wcstools.pc - -bin_SCRIPTS = wcstools - -EXTRA_DIST = wcstools COPYING Readme NEWS Programs - -bin_PROGRAMS = \ - cphead delwcs delhead edhead fixpix gethead i2f imcat imhead immatch \ - imrot imsize imstar imwcs scat sethead addpix getpix setpix sky2xy \ - keyhead skycoor subpix xy2sky wcshead conpix gettab newfits getfits \ - imstack imextract sumpix wcsremap getcol wcsgetdate imfill imsmooth imresize \ - fileroot filename filext char2sp sp2char wcscrlf isnum isrange isfits \ - isfile simpos bincat - -# these ones don't need libwcs -wcscrlf_SOURCES = crlf.c -filename_SOURCES = filename.c -filedir_SOURCES = filedir.c -fileroot_SOURCES = fileroot.c -filext_SOURCES = filext.c -isrange_SOURCES = isrange.c - -LDADD = $(top_builddir)/libwcs/libwcstools.la - -bincat_SOURCES = bincat.c -getcol_SOURCES = getcol.c -wcsgetdate_SOURCES = getdate.c -gethead_SOURCES = gethead.c -getfits_SOURCES = getfits.c -getpix_SOURCES = getpix.c -gettab_SOURCES = gettab.c -imcat_SOURCES = imcat.c -imsize_SOURCES = imsize.c -imstar_SOURCES = imstar.c -imwcs_SOURCES = imwcs.c -immatch_SOURCES = immatch.c -scat_SOURCES = scat.c -setpix_SOURCES = setpix.c -skycoor_SOURCES = skycoor.c -sumpix_SOURCES = sumpix.c -xy2sky_SOURCES = xy2sky.c -simpos_SOURCES = simpos.c - -addpix_SOURCES = addpix.c -char2sp_SOURCES = char2sp.c -conpix_SOURCES = conpix.c -cphead_SOURCES = cphead.c -delwcs_SOURCES = delwcs.c -delhead_SOURCES = delhead.c -edhead_SOURCES = edhead.c -fixpix_SOURCES = fixpix.c -i2f_SOURCES = i2f.c -imfill_SOURCES = imfill.c -imresize_SOURCES = imresize.c -imsmooth_SOURCES = imsmooth.c -imhead_SOURCES = imhead.c -imrot_SOURCES = imrot.c -imstack_SOURCES = imstack.c -imextract_SOURCES = imextract.c -isfile_SOURCES = isfile.c -isnum_SOURCES = isnum.c -keyhead_SOURCES = keyhead.c -newfits_SOURCES = newfits.c -wcsremap_SOURCES = remap.c -sethead_SOURCES = sethead.c -sky2xy_SOURCES = sky2xy.c -sp2char_SOURCES = sp2char.c -subpix_SOURCES = subpix.c -wcshead_SOURCES = wcshead.c diff --git a/sci-astronomy/wcstools/files/Makefile.libwcs.am b/sci-astronomy/wcstools/files/Makefile.libwcs.am deleted file mode 100644 index 5905aa3..0000000 --- a/sci-astronomy/wcstools/files/Makefile.libwcs.am +++ /dev/null @@ -1,17 +0,0 @@ -lib_LTLIBRARIES = libwcstools.la -libwcstools_la_SOURCES = \ - imsetwcs.c imgetwcs.c matchstar.c findstar.c daoread.c wcscon.c \ - fitswcs.c wcsinit.c wcs.c ty2read.c webread.c tmcread.c \ - gscread.c gsc2read.c ujcread.c uacread.c ubcread.c ucacread.c \ - sdssread.c tabread.c binread.c ctgread.c actread.c catutil.c \ - skybotread.c imrotate.c fitsfile.c imhfile.c \ - hget.c hput.c imio.c dateutil.c imutil.c \ - worldpos.c tnxpos.c zpxpos.c dsspos.c platepos.c \ - sortstar.c platefit.c iget.c fileutil.c \ - wcslib.c lin.c cel.c proj.c sph.c wcstrig.c distort.c poly.c - -wcsdir = $(includedir)/wcs -wcs_HEADERS = \ - wcscat.h wcslib.h wcs.h lwcs.h fitshead.h fitsfile.h imio.h - -noinst_HEADERS = fitsfile1.h wcscat1.h diff --git a/sci-astronomy/wcstools/files/configure.ac b/sci-astronomy/wcstools/files/configure.ac deleted file mode 100644 index 3a46108..0000000 --- a/sci-astronomy/wcstools/files/configure.ac +++ /dev/null @@ -1,9 +0,0 @@ -AC_INIT([wcstools], [3.9.x] , [http://tdc-www.harvard.edu/wcstools/]) -AM_INIT_AUTOMAKE([foreign]) -AC_CONFIG_HEADERS([config.h]) - -AC_PROG_CC -LT_INIT([disable-static]) -AC_CHECK_LIB([m], [sin]) -AC_CONFIG_FILES([libwcs/Makefile Makefile wcstools.pc]) -AC_OUTPUT diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-RASortStars.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-RASortStars.patch deleted file mode 100644 index 27a912f..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-RASortStars.patch +++ /dev/null @@ -1,14 +0,0 @@ -Author: Ole Streicher <olebole@debian.org> -Description: Fix uninitialized value for haspm in RASortStars() - This fixes a crash with 'imstar -s'. ---- a/libwcs/sortstar.c -+++ b/libwcs/sortstar.c -@@ -417,6 +417,8 @@ - hasnum = 1; - if (spra != NULL && spdec != NULL) - haspm = 1; -+ else -+ haspm = 0; - if (sx != NULL && sy != NULL) - hasxy = 1; - else diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-compiler_warnings.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-compiler_warnings.patch deleted file mode 100644 index 57bb8cb..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-compiler_warnings.patch +++ /dev/null @@ -1,13 +0,0 @@ -Author: Ole Streicher <debian@liska.ath.cx> -Description: Fix some compiler warnings. ---- a/imcat.c -+++ b/imcat.c -@@ -1778,7 +1778,7 @@ - if (refcat == UCAC2 || refcat == UCAC3 || refcat == UCAC4) { - nim = gc[i] / 1000; - nct = gc[i] % 1000; -- sprintf (temp, " ni nc", nim, nct); -+ sprintf (temp, " ni%i nc%i", nim, nct); - strcat (headline, temp); - } - else if (gcset) diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-manpages.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-manpages.patch deleted file mode 100644 index bd9d568..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-manpages.patch +++ /dev/null @@ -1,658 +0,0 @@ -Author: Ole Streicher <debian@liska.ath.cx> -Description: Fix the names and spelling of manpages to make lintian happy ---- a/man/man1/skycoor.1 -+++ b/man/man1/skycoor.1 -@@ -1,12 +1,12 @@ --.TH skycoor(1) WCSTools "9 November 2001" -+.TH skycoor 1 WCSTools "9 November 2001" - .SH Name - skycoor \- Convert coordinates - .SH Synopsis --skycoor [-bdgjv] [-n ndec] ra1 dec1 sys1 ... ran decn sysn -+skycoor [\-bdgjv] [\-n ndec] ra1 dec1 sys1 ... ran decn sysn - .br - or - .br --skycoor [-vbjg] [-n ndec] @listfile -+skycoor [\-vbjg] [\-n ndec] @listfile - .SH Description - .I skycoor - converts coordinates between the J2000, B1950, and galactic coordinate ---- a/man/man1/sethead.1 -+++ b/man/man1/sethead.1 -@@ -1,8 +1,8 @@ --.TH sethead(1) WCSTools "6 July 2001" -+.TH sethead 1 WCSTools "6 July 2001" - .SH Name - sethead \- Set FITS or IRAF header keyword values - .SH Synopsis --sethead [-dknv][r letter] <FITS or IRAF file> kw1=val1 kw2=val2 ... kwn=valuen -+sethead [\-dknv][r letter] <FITS or IRAF file> kw1=val1 kw2=val2 ... kwn=valuen - .SH Description - Set parameters in the header of a FITS or IRAF image. If the keywords do - not already exist, they are added at the end of the header. Values are ---- a/man/man1/keyhead.1 -+++ b/man/man1/keyhead.1 -@@ -1,13 +1,13 @@ --.TH keyhead(1) WCSTools "6 July 2001" -+.TH keyhead 1 WCSTools "6 July 2001" - .SH Name - keyhead \- Change FITS or IRAF header keyword names - .SH Synopsis --sethead [-hknv] <FITS or IRAF file> kw1=kw1a kw2=kwd2a ... kwn=kwdna -+keyhead [\-hknv] <FITS or IRAF file> kw1=kw1a kw2=kwd2a ... kwn=kwdna - .SH Description - Change the names of keywords in FITS or IRAF image headers. Each current - image keyword whose entry is to be modified should be followed by an - equal sign and a second keyword, with no intervening spaces. --If the -r option is used, the value of the second keyword is transfered -+If the \-r option is used, the value of the second keyword is transferred - to that of the first. Otherwise, the name of the first keyword is changed - to the second keyword. - To change keywords in a list of files, substitute @<listfile> for the file ---- a/man/man1/sgsc.1 -+++ b/man/man1/sgsc.1 -@@ -1,15 +1,15 @@ --.TH sgsc(1) WCS "14 April 1998" -+.TH sgsc 1 WCS "14 April 1998" - .SH Name - sgsc \- Find HST GSC stars in a square on the sky - .SH Synopsis --sgsc [options] [-b or -j] ra dec -+sgsc [options] [\-b or \-j] ra dec - .SH Description - .I sgsc - is a utility for finding all of the Hubble Space Telescope Guide Star - Catalog objects in a specified region of the sky and listing them with their - sky positions and magnitudes in order of brightness, with the brighter ones - first. --Output is to standard out, unless the -w flag is set, in -+Output is to standard out, unless the \-w flag is set, in - which case it goes to objectname.gsc or search.gsc. It is somewhat - similar to RGSC, which can search from lists of coordinates but cannot - sort the output. It is a link to scat. -@@ -25,7 +25,7 @@ - Sort by distance from center instead of flux - .TP - .B \-g <class> --Object class (0=stars 3=galaxies -1=all) -+Object class (0=stars 3=galaxies \-1=all) - .TP - .B \-h - Print heading, else do not -@@ -34,7 +34,7 @@ - Output J2000 (FK5) coordinates around this center - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print ---- a/man/man1/setpix.1 -+++ b/man/man1/setpix.1 -@@ -1,8 +1,8 @@ --.TH setpix(1) WCSTools "6 July 2001" -+.TH setpix 1 WCSTools "6 July 2001" - .SH Name - setpix \- Set FITS or IRAF image values - .SH Synopsis --setpix [-vn] file.fts [x_range y_range value] [@valuefile] -+setpix [\-vn] file.fts [x_range y_range value] [@valuefile] - .SH Description - Set a specified pixel or range of pixels in a FITS or IRAF image to a - specified value. More than one range of pixels and values may be specified ---- a/man/man1/sky2xy.1 -+++ b/man/man1/sky2xy.1 -@@ -1,12 +1,12 @@ --.TH sky2xy(1) WCSTools "6 July 2001" -+.TH sky2xy 1 WCSTools "6 July 2001" - .SH Name - sky2xy \- Compute X Y from RA Dec using WCS in FITS and IRAF image files - .SH Synopsis --sky2xy [-vbjg] file.fts ra1 dec1 ... ran decn -+sky2xy [\-vbjg] file.fts ra1 dec1 ... ran decn - .br - or - .br --sky2xy [-vbjg] file.fts @listfile -+sky2xy [\-vbjg] file.fts @listfile - .SH Description - .I sky2xy - (pronounced sky-to-X-Y) is a utility for getting the image coordinates of ---- a/man/man1/getcol.1 -+++ b/man/man1/getcol.1 -@@ -1,8 +1,8 @@ --.TH getcol(1) WCSTools "8 November 2001" -+.TH getcol 1 WCSTools "8 November 2001" - .SH Name - getcol \- Extract specified columns from an ASCII table file - .SH Synopsis --getcol [-amv][-n num][-r lines][-s num] filename [column number range] -+getcol [\-amv][\-n num][\-r lines][\-s num] filename [column number range] - .SH Description - Extract specified columns from an ASCII table file - -@@ -20,8 +20,8 @@ - .TP - .B field range - Print value of these columns for the number of lines of the table --specified by the -n argument after the skippiing the number of --lines specified by the -s argument. A value of 0 causes the -+specified by the \-n argument after the skippiing the number of -+lines specified by the \-s argument. A value of 0 causes the - entire input line to be printed. - .TP - .B \-a -@@ -59,12 +59,12 @@ - .B \-m - Compute the means of all numeric columns selected, printing the mean - on the line following the result (or the line following the sum if ---a is used). Columns with no mean are filled with ___. -+\-a is used). Columns with no mean are filled with ___. - (Added in version 2.6.9) - .TP - .B \-n num - Print selected columns for this many lines. If not specified, all --lines will be read after the number of lines specified by -s have -+lines will be read after the number of lines specified by \-s have - been skipped. - .TP - .B \-o ---- a/man/man1/imwcs.1 -+++ b/man/man1/imwcs.1 -@@ -1,4 +1,4 @@ --.TH imwcs(1) WCSTools "30 January 2003" -+.TH imwcs 1 WCSTools "30 January 2003" - .SH Name - imwcs \- Set WCS in FITS and IRAF image files - .SH Synopsis -@@ -47,7 +47,7 @@ - Write FITS output no matter what input - .TP - .B \-g <class> --Guide Star Catalog class (-1=all,0,3) (default -1) -+Guide Star Catalog class (\-1=all,0,3) (default \-1) - .TP - .B \-h <number> - Change the maximum number of reference stars to match from 25 to -@@ -66,7 +66,7 @@ - Reflect left<->right before rotating and fitting - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <number> - Number of parameters to fit (1-8, or digit string). The default is 2 (RA+Dec) -@@ -99,7 +99,7 @@ - Offset tolerance in pixels (default 20) - .TP - .B \-u <file> ---u: File of X Y RA Dec assignments for initial WCS -+File of X Y RA Dec assignments for initial WCS - .TP - .B \-v - Verbose listing of processing intermediate results ---- a/man/man1/wcstools.1 -+++ b/man/man1/wcstools.1 -@@ -1,10 +1,10 @@ --.TH wcstools(1) WCSTools "6 July 2001" -+.TH wcstools 1 WCSTools "6 July 2001" - .SH Name - wcstools \- Programs to access image world coordinate systems and catalogs - .SH Setting an Image World Coordinate System - .TP - imwcs --Automaticaly find stars in a FITS or IRAF image, match them to HST Guide -+Automatically find stars in a FITS or IRAF image, match them to HST Guide - USNO A or USNO UJ Stars, compute the relation between sky coordinates and - image coordinates, and write in in the image header. [after U of Iowa SETWCS] - .TP ---- a/man/man1/imua2.1 -+++ b/man/man1/imua2.1 -@@ -1,4 +1,4 @@ --.TH imua2(1) WCS "14 April 1998" -+.TH imua2 1 WCS "14 April 1998" - .SH Name - imua2 \- Find USNO-A2.0 stars in FITS or IRAF image files - .SH Synopsis -@@ -19,7 +19,7 @@ - Output in J2000, optional new image center in J2000 (FK5) RA and Dec - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print -@@ -63,7 +63,7 @@ - Output J2000 (FK5) coordinates (optional center) - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print ---- a/man/man1/delhead.1 -+++ b/man/man1/delhead.1 -@@ -1,8 +1,8 @@ --.TH delhead(1) WCSTools "15 July 1999" -+.TH delhead 1 WCSTools "15 July 1999" - .SH Name - delhead \- Set FITS or IRAF header keyword values - .SH Synopsis --delhead [-nv] <FITS or IRAF file[s]> kw1 kw2 ... kwn -+delhead [\-nv] <FITS or IRAF file[s]> kw1 kw2 ... kwn - .SH Description - Delete keyword entries from the header of FITS or IRAF image[s]. If - a keyword does not already exist, ignore it. To delete keywords in ---- a/man/man1/imusa2.1 -+++ b/man/man1/imusa2.1 -@@ -1,4 +1,4 @@ --.TH imusa2(1) WCS "14 April 1998" -+.TH imusa2 1 WCS "14 April 1998" - .SH Name - imusa2 \- Find USNO-SA2.0 stars in FITS or IRAF image files - .SH Synopsis -@@ -19,7 +19,7 @@ - Output in J2000, optional new image center in J2000 (FK5) RA and Dec - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print ---- a/man/man1/gethead.1 -+++ b/man/man1/gethead.1 -@@ -1,8 +1,8 @@ --.TH gethead(1) WCSTools "6 July 2001" -+.TH gethead 1 WCSTools "6 July 2001" - .SH Name - gethead \- Print FITS or IRAF header keyword values - .SH Synopsis --gethead [-hptv] [-d pathname] [-n num] <FITS or IRAF file> kw1 kw2 ... kwn -+gethead [\-hptv] [\-d pathname] [\-n num] <FITS or IRAF file> kw1 kw2 ... kwn - .SH Description - Print values of the specified keywords from the given image header. By - default they are all listed on one line, separated by spaces. The ---- a/man/man1/imcat.1 -+++ b/man/man1/imcat.1 -@@ -1,4 +1,4 @@ --.TH imcat(1) WCSTools "30 January 2003" -+.TH imcat 1 WCSTools "30 January 2003" - .SH Name - imcat \- List catalog stars in FITS and IRAF image files - .SH Synopsis -@@ -41,13 +41,13 @@ - Add this keyword to output from tab table search - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print - .TP - .B \-o <type> --Set HST Guide Star object class to print (0=stars, 3=nonstars, -1=all, -2=band) -+Set HST Guide Star object class to print (0=stars, 3=nonstars, \-1=all, \-2=band) - .TP - .B \-p <scale> - Initial plate scale in arcsec per pixel (default from file) -@@ -55,9 +55,9 @@ - .B \-q <c|d|o|s|x|v|+> - Write SAOimage region file with this shape, o=circle, s=square, d=diamond, - +=cross, and x=X, with the radius scaled with magnitude unless specified --with a -r command line entry. v will cause stellar Guide Stars to plot with -+with a \-r command line entry. v will cause stellar Guide Stars to plot with - a + and nonstellar Guide Stars to plot with an x. If character is is preceded --by p, the size specified by the -r command is assumed to be in pixels, not -+by p, the size specified by the \-r command is assumed to be in pixels, not - arcseconds. A p alone specifies a circle in pixels. - .TP - .B \-r <radius> -@@ -65,7 +65,7 @@ - arcseconds. SAOimage can then read this file, with will have positions and - radii in pixels and plot it over an image. If the radius is specified as - zero, the output radii will scale between 5 and dim/100 over the range of --magnitudes of sources found in the image area. If the -q option is specified -+magnitudes of sources found in the image area. If the \-q option is specified - with a 'p' in it, this number is assumed to be in pixels instead of arcseconds. - .TP - .B \-s d|m|n|p|r|x|y ---- a/man/man1/scat.1 -+++ b/man/man1/scat.1 -@@ -1,18 +1,18 @@ --.TH scat(1) WCSTools "30 January 2003" -+.TH scat 1 WCSTools "30 January 2003" - .SH Name - scat \- Find catalog stars in a square or circle on the sky - .SH Synopsis --scat [options] [-b or -j] ra dec -+scat [options] [\-b or \-j] ra dec - .SH Description - .I scat - is a utility for finding all of the Hubble Space Telescope Guide Star - Catalog (GSC), U.S. Naval Observatory A2.0 (UA2), B1.0 (UB1), SA2.0 (USA2), - or UJ (UJC) Catalogs, or locally catalogued objects in a specified region --of the sky and listing their sky coordinates to standard output. If the -w -+of the sky and listing their sky coordinates to standard output. If the \-w - flag is set, they are written to a file objectname.catalogname, where objectname --is given by the argument to -o on the command line, defaulting to "search", --and catalogname is given by the argument to -c on the command line. The --catalog defaults to the GSC, if no -c argument is present. scat resembles -+is given by the argument to \-o on the command line, defaulting to "search", -+and catalogname is given by the argument to \-c on the command line. The -+catalog defaults to the GSC, if no \-c argument is present. scat resembles - rgsc(1) and star(1), which can search from lists of coordinates but - cannot sort the output. sgsc, suac, and susac are links to this program.1 - .SH Options -@@ -37,7 +37,7 @@ - Output search center for other programs - .TP - .B \-g <class> --HST Guide Star Catalog object class (0=stars 3=galaxies -1=all) -+HST Guide Star Catalog object class (0=stars 3=galaxies \-1=all) - .TP - .B \-h - Print search and column heading, else do not -@@ -55,7 +55,7 @@ - Print search center and closest star on one line - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print -@@ -67,7 +67,7 @@ - Equinox of output position in fractional years - .TP - .B \-r <radius> --Halfwidth (-radius if negative) of search area in arcseconds (default 10) -+Halfwidth (\-radius if negative) of search area in arcseconds (default 10) - .TP - .B \-s d|m|n|p|r - Sort by (d)eclination, (m)agnitude, (n)o sort, (p)distance from center, or -@@ -84,10 +84,10 @@ - Verbose listing of processing intermediate results - .TP - .B \-w --Write output file objectname.catalog or search.catalog if -o is not used. -+Write output file objectname.catalog or search.catalog if \-o is not used. - .TP - .B \-x <type> --GSC object type (0=stars 3=galaxies -1=all -2=bands) -+GSC object type (0=stars 3=galaxies \-1=all \-2=bands) - .TP - .B \-y <year> - Epoch of output positions in fractional years (for proper motion only) ---- a/man/man1/imsize.1 -+++ b/man/man1/imsize.1 -@@ -1,8 +1,8 @@ --.TH imsize(1) WCSTools "6 July 2001" -+.TH imsize 1 WCSTools "6 July 2001" - .SH Name - imsize \- Print size of image in WCS and pixels - .SH Synopsis --imsize [-vcd] [-p scale] [-b ra dec] [-j ra dec] FITS or IRAF file(s) -+imsize [\-vcd] [\-p scale] [\-b ra dec] [\-j ra dec] FITS or IRAF file(s) - .SH Description - .I imsize - is a utility for printing the region covered by an image using the world ---- a/man/man1/imrot.1 -+++ b/man/man1/imrot.1 -@@ -1,4 +1,4 @@ --.TH imrot(1) WCSTools "6 July 2001" -+.TH imrot 1 WCSTools "6 July 2001" - .SH Name - imrot \- Rotate and/or Reflect FITS and IRAF image files - .SH Synopsis -@@ -26,8 +26,8 @@ - Verbose - .B \-x <num> - Output pixel size in bits (FITS code, default=input) --Allowed values are 8, 16, 32 for integers, -16 for unsigned integers, and ---32 and -64 for 4- and 8-byte floating point numbers -+Allowed values are 8, 16, 32 for integers, \-16 for unsigned integers, and -+\-32 and \-64 for 4- and 8-byte floating point numbers - - .SH Author - Doug Mink, SAO (dmink@cfa.harvard.edu) ---- a/man/man1/imhead.1 -+++ b/man/man1/imhead.1 -@@ -1,4 +1,4 @@ --.TH imhead(1) WCSTools "6 July 2001" -+.TH imhead 1 WCSTools "6 July 2001" - .SH Name - imhead \- Print FITS or IRAF image header - .SH Synopsis ---- a/man/man1/susa2.1 -+++ b/man/man1/susa2.1 -@@ -1,13 +1,13 @@ --.TH susa2(1) WCS "9 June 2000" -+.TH susa2 1 WCS "9 June 2000" - .SH Name --Find USNO-SA2.0 Catalog stars in a square on the sky -+susa2 \- Find USNO-SA2.0 Catalog stars in a square on the sky - .SH Synopsis --susac [options] [-b or -j] ra dec -+susac [options] [\-b or \-j] ra dec - .SH Description - .I suac - finds all of the U.S. Naval Observatory SA2.0 Catalog objects in a specified - region of the sky and lists their sky positions and magnitudes in order of --brightness. Output is to standard out, unless the -w flag is set, in which -+brightness. Output is to standard out, unless the \-w flag is set, in which - case it goes to objectname.uac or search.uac. It is a link to scat. - .SH Options - .B \-a -@@ -21,7 +21,7 @@ - .B \-j <RA> <Dec> - Output J2000 (FK5) coordinates around this center - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .B \-n <num> - Number of brightest stars to print - .B \-o <name> ---- a/man/man1/wcshead.1 -+++ b/man/man1/wcshead.1 -@@ -1,8 +1,8 @@ --.TH wcshead(1) WCSTools "19 July 2004" -+.TH wcshead 1 WCSTools "19 July 2004" - .SH Name - wcshead \- Print WCS part of FITS or IRAF image header - .SH Synopsis --wcshead [-hrtvsz] FITS or IRAF file(s) -+wcshead [\-hrtvsz] FITS or IRAF file(s) - .SH Description - .I wcshead - is a utility for printing the world coordinate system information in ---- a/man/man1/delwcs.1 -+++ b/man/man1/delwcs.1 -@@ -1,8 +1,8 @@ --.TH delwcs(1) WCSTools "6 July 2001" -+.TH delwcs 1 WCSTools "6 July 2001" - .SH Name - delwcs \- Delete WCS in FITS and IRAF image files - .SH Synopsis --delwcs [-v] FITS or IRAF file(s) -+delwcs [\-v] FITS or IRAF file(s) - .SH Description - Delete WCS keywords "CTYPE1", "CRVAL1", "CDELT1", "CRPIX1", "CROTA1", "CTYPE2", - "CRVAL2", "CDELT2", "CRPIX2", "CROTA2", and "IMWCS" from a fits header. If ---- a/man/man1/imstar.1 -+++ b/man/man1/imstar.1 -@@ -1,4 +1,4 @@ --.TH imstar(1) WCSTools "6 July 2001" -+.TH imstar 1 WCSTools "6 July 2001" - .SH Name - imstar \- Find stars in FITS and IRAF image files - .SH Synopsis -@@ -7,7 +7,7 @@ - .SH Options - .TP - .B <hh:mm:ss> <dd:mm:ss> [J2000, B1950] --Coordinates for center (or reference pixel if -x is used). -+Coordinates for center (or reference pixel if \-x is used). - .TP - .B \-a <angle> - Image rotation angle in degrees (default 0). If multiple of 90, rotate -@@ -34,7 +34,7 @@ - .B \-i <num> - Minimum peak value for star in image (<0=-sigma) - Setting this to reject all but 10-15 stars is a good way to speed up the --star-finding process. If num is less than zero, the minimum peak is -num -+star-finding process. If num is less than zero, the minimum peak is \-num - image pixel standard deviations. Setting this number rejects faint stars - early in the selection process for a significant saving in computing time. - .TP -@@ -45,7 +45,7 @@ - Print each star as it is found for debugging - .TP - .B \-l --Reflect the image left <-> right before rotating (-a) and searching for stars. -+Reflect the image left <\-> right before rotating (\-a) and searching for stars. - .TP - .B \-m <magnitude> - Magnitude offset -@@ -81,16 +81,16 @@ - .TP - .B \-w - Write output to a file in addition to standard out. --If DAO format (-o), create the name by adding .dao to the image file name. --If Starbase format (-t), create the name by adding .tab to the image file name. --If ASCII format (-f), create the name by adding .stars to the image file name. -+If DAO format (\-o), create the name by adding .dao to the image file name. -+If Starbase format (\-t), create the name by adding .tab to the image file name. -+If ASCII format (\-f), create the name by adding .stars to the image file name. - .TP - .B \-x <X> <Y> - X and Y coordinates of reference pixel (if not in header or image center) - .TP - .B \-z --Use AIPS classic projection code (for "-SIN", "-TAN", "-ARC", "-NCP", --"-GLS", "-MER", "-AIT" and "-STG" only) instead of WCSLIB proposed -+Use AIPS classic projection code (for "\-SIN", "\-TAN", "\-ARC", "\-NCP", -+"\-GLS", "\-MER", "\-AIT" and "\-STG" only) instead of WCSLIB proposed - standard projection code. - - .SH Web Page ---- a/man/man1/xy2sky.1 -+++ b/man/man1/xy2sky.1 -@@ -1,12 +1,12 @@ --.TH xy2sky(1) WCSTools "6 July 2001" -+.TH xy2sky 1 WCSTools "6 July 2001" - .SH Name - xy2sky \- Compute RA Dec from X Y using WCS in FITS and IRAF image files - .SH Synopsis --xy2sky [-vbjg] [-n ndec] file.fts x1 y1 ... xn yn -+xy2sky [\-vbjg] [\-n ndec] file.fts x1 y1 ... xn yn - .br - or - .br --xy2sky [-bdjgv] [-n ndec] file.fts @listfile -+xy2sky [\-bdjgv] [\-n ndec] file.fts @listfile - .SH Description - .I xy2sky - (pronounced X-Y-to-sky) is a utility for getting the world coordinates of -@@ -31,7 +31,7 @@ - RA and Dec output in degrees - .TP - .B \-e --Ouput in ecliptic longitude and latitude in degrees. -+Output in ecliptic longitude and latitude in degrees. - .TP - .B \-f <number> - Set third dimension for 3-D projections such as CSC -@@ -54,7 +54,7 @@ - Number of decimal places in output RA seconds - .TP - .B \-q <year> --Output equinox if not 2000 (-j) or 1950 (-b) -+Output equinox if not 2000 (\-j) or 1950 (\-b) - .TP - .B \-t - Output as tab-separated table ---- a/man/man1/imgsc.1 -+++ b/man/man1/imgsc.1 -@@ -1,4 +1,4 @@ --.TH imgsc(1) WCS "14 April 1998" -+.TH imgsc 1 WCS "14 April 1998" - .SH Name - imgsc \- Find HST GSC stars in FITS or IRAF image files - .SH Synopsis -@@ -16,7 +16,7 @@ - Reference catalog (gsc, ujc, or tab table file - .TP - .B \-g <class> --Guide Star Catalog class (-1=all,0,3 (default -1) -+Guide Star Catalog class (\-1=all,0,3 (default \-1) - .TP - .B \-h - Print heading, else do not -@@ -25,7 +25,7 @@ - Output in J2000, optional new image center in J2000 (FK5) RA and Dec - .TP - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .TP - .B \-n <num> - Number of brightest stars to print ---- a/man/man1/i2f.1 -+++ b/man/man1/i2f.1 -@@ -1,4 +1,4 @@ --.TH i2f(1) WCSTools "6 July 2001" -+.TH i2f 1 WCSTools "6 July 2001" - .SH Name - i2f \- Write FITS files from IRAF image files - .SH Synopsis ---- a/man/man1/edhead.1 -+++ b/man/man1/edhead.1 -@@ -1,4 +1,4 @@ --.TH edhead(1) WCSTools "6 July 2001" -+.TH edhead 1 WCSTools "6 July 2001" - .SH Name - edhead \- Edit header of FITS or IRAF image file - .SH Synopsis ---- a/man/man1/sua2.1 -+++ b/man/man1/sua2.1 -@@ -1,13 +1,13 @@ --.TH sua2(1) WCS "19 November 1999" -+.TH sua2 1 WCS "19 November 1999" - .SH Name --Find USNO-A2.0 Catalog stars in a square on the sky -+sua2 \- Find USNO-A2.0 Catalog stars in a square on the sky - .SH Synopsis - sua2 [options] ra dec system - .SH Description - .I suac - finds all of the U.S. Naval Observatory A2.0 Catalog objects in a specified - region of the sky and lists their sky positions and magnitudes in order of --brightness. Output is to standard out, unless the -w flag is set, in which -+brightness. Output is to standard out, unless the \-w flag is set, in which - case it goes to objectname.uac or search.uac. It is a link to scat. - .SH Options - .B \-a -@@ -31,7 +31,7 @@ - .B \-l - Print center and closest star on one line - .B \-m [<bright magnitude>] <faint magnitude> --Limiting catalog magnitude(s) (default none, bright -2 if only faint is given) -+Limiting catalog magnitude(s) (default none, bright \-2 if only faint is given) - .B \-n <num> - Number of brightest stars to print - .B \-o <name> ---- a/man/man1/simpos.1 -+++ b/man/man1/simpos.1 -@@ -1,4 +1,4 @@ --.TH simpos(1) WCSTools "14 May 2015" -+.TH simpos 1 WCSTools "14 May 2015" - .SH Name - simpos \- Find position of a named object in the sky - .SH Synopsis diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-mayhem.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-mayhem.patch deleted file mode 100644 index 694c072..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-mayhem.patch +++ /dev/null @@ -1,69 +0,0 @@ -Author: Ole Streicher <debian@liska.ath.cx> -Description: Fix several bugs that appear in during the mayhem tests. -Bug: http://bugs.debian.org/715682 -Bug: http://bugs.debian.org/715755 -Bug: http://bugs.debian.org/715905 -Bug: http://bugs.debian.org/715956 -Bug: http://bugs.debian.org/715957 ---- a/getfits.c -+++ b/getfits.c -@@ -108,6 +108,7 @@ - usage ("Right ascension given but no declination"); - else { - strcpy (rastr, *av); -+ ac--; - strcpy (decstr, *++av); - ra0 = str2ra (rastr); - dec0 = str2dec (decstr); ---- a/getpix.c -+++ b/getpix.c -@@ -83,6 +83,7 @@ - char *crange; /* Column range string */ - char *rstr; - char *dstr = NULL; -+ char rastr[32], decstr[32]; - char *cstr; - int systemp; - int i; ---- a/bincat.c -+++ b/bincat.c -@@ -156,7 +156,7 @@ - if (ac < 3) - usage((char)0, "3 arguments needed for center coordinate"); - else { -- strcpy (rastr, *++av); -+ strcpy (rastr, *av); - ac--; - strcpy (decstr, *++av); - setcenter (rastr, decstr); ---- a/cphead.c -+++ b/cphead.c -@@ -137,7 +137,7 @@ - break; - - case 'w': /* Copy entire WCS */ -- nkwd1 = 87; -+ nkwd1 = 236; - if (nkwd + nkwd1 > maxnkwd) { - maxnkwd = nkwd + nkwd1 + 32; - kwdnew = (char **) calloc (maxnkwd, sizeof (void *)); -@@ -148,7 +148,7 @@ - free (kwd); - kwd = kwdnew; - } -- for (ikwd = nkwd; i < nkwd+nkwd1; i++) { -+ for (ikwd = nkwd; ikwd < nkwd+nkwd1+32; ikwd++) { - kwd[ikwd] = (char *) calloc (32, 1); - } - strcpy (kwd[nkwd], "RA"); ---- a/filext.c -+++ b/filext.c -@@ -80,7 +80,7 @@ - ext = ext + 1; - } - } -- printf ("%s\n", ext); -+ printf ("%s\n", (ext)?ext:""); - } - - return (0); diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-spelling.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-spelling.patch deleted file mode 100644 index 7c666c1..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-spelling.patch +++ /dev/null @@ -1,69 +0,0 @@ -Author: Ole Streicher <debian@liska.ath.cx> -Description: Spellfixes to make lintian happy ---- a/libwcs/fitsfile.c -+++ b/libwcs/fitsfile.c -@@ -1583,7 +1583,7 @@ - if (!access (filename, 0)) { - fd = open (filename, O_WRONLY); - if (fd < 3) { -- snprintf (fitserrmsg,79, "FITSWIMAGE: file %s not writeable\n", filename); -+ snprintf (fitserrmsg,79, "FITSWIMAGE: file %s not writable\n", filename); - return (0); - } - } -@@ -1622,7 +1622,7 @@ - if (!access (filename, 0)) { - fd = open (filename, O_WRONLY); - if (fd < 3) { -- snprintf (fitserrmsg,79, "FITSWEXT: file %s not writeable\n", -+ snprintf (fitserrmsg,79, "FITSWEXT: file %s not writable\n", - filename); - return (0); - } -@@ -1884,7 +1884,7 @@ - if (!access (filename, 0)) { - fdout = open (filename, O_WRONLY); - if (fdout < 3) { -- snprintf (fitserrmsg,79, "FITSCIMAGE: file %s not writeable\n", filename); -+ snprintf (fitserrmsg,79, "FITSCIMAGE: file %s not writable\n", filename); - return (0); - } - } -@@ -1970,7 +1970,7 @@ - if (!access (filename, 0)) { - fd = open (filename, O_WRONLY); - if (fd < 3) { -- snprintf (fitserrmsg, 79, "FITSWHEAD: file %s not writeable\n", filename); -+ snprintf (fitserrmsg, 79, "FITSWHEAD: file %s not writable\n", filename); - return (0); - } - } -@@ -2072,7 +2072,7 @@ - if (ext != NULL) - *ext = cext; - if (fd < 3) { -- snprintf (fitserrmsg, 79, "FITSWEXHEAD: file %s not writeable\n", filename); -+ snprintf (fitserrmsg, 79, "FITSWEXHEAD: file %s not writable\n", filename); - return (-1); - } - ---- a/libwcs/imhfile.c -+++ b/libwcs/imhfile.c -@@ -896,7 +896,7 @@ - if (!access (hdrname, 0)) { - fd = open (hdrname, O_WRONLY); - if (fd < 3) { -- fprintf (stderr, "IRAFWIMAGE: file %s not writeable\n", hdrname); -+ fprintf (stderr, "IRAFWIMAGE: file %s not writable\n", hdrname); - return (0); - } - } -@@ -993,7 +993,7 @@ - if (!access (pixname, 0)) { - fd = open (pixname, O_WRONLY); - if (fd < 3) { -- fprintf (stderr, "IRAFWIMAGE: file %s not writeable\n", pixname); -+ fprintf (stderr, "IRAFWIMAGE: file %s not writable\n", pixname); - return (0); - } - } diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-sprintf.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-sprintf.patch deleted file mode 100644 index 4ec5993..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-sprintf.patch +++ /dev/null @@ -1,36 +0,0 @@ -Author: Ole Streicher <olebole@debian.net> -Description: Fix overlappong buffers in sprintf - In sprintf, overlapping buffers lead to undefined behaviour. - This causes different results on Debian and Ubuntu. ---- a/imstar.c -+++ b/imstar.c -@@ -818,7 +818,7 @@ - sprintf (headline, "%7.2f %7.2f %6.2f %d", - sx[i],sy[i],smag[i],sp[i]); - if (iswcs (wcs)) -- sprintf (headline, "%s %s %s", headline, rastr, decstr); -+ sprintf (headline + strlen(headline), " %s %s", rastr, decstr); - if (wfile) - fprintf (fd, "%s\n", headline); - else -@@ -827,14 +827,14 @@ - else { - sprintf (headline, "%3d %s %s %6.2f", i+1,rastr,decstr,smag[i]); - if (wcs->nxpix < 100.0 && wcs->nypix > 100.0) -- sprintf (headline, "%s %5.2f %5.2f %d", -- headline, sx[i],sy[i], sp[i]); -+ sprintf (headline + strlen(headline), " %5.2f %5.2f %d", -+ sx[i],sy[i], sp[i]); - else if (wcs->nxpix < 1000.0 && wcs->nypix < 1000.0) -- sprintf (headline, "%s %6.2f %6.2f %d", -- headline, sx[i],sy[i], sp[i]); -+ sprintf (headline + strlen(headline), " %6.2f %6.2f %d", -+ sx[i],sy[i], sp[i]); - else -- sprintf (headline, "%s %7.2f %7.2f %d", -- headline, sx[i],sy[i], sp[i]); -+ sprintf (headline + strlen(headline), " %7.2f %7.2f %d", -+ sx[i],sy[i], sp[i]); - if (wfile) - fprintf (fd, "%s\n", headline); - else diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-use_abort.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-use_abort.patch deleted file mode 100644 index 4ebc206..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-use_abort.patch +++ /dev/null @@ -1,14 +0,0 @@ -Author: Ole Streicher <debian@liska.ath.cx> -Description: If a unrecoverable error occurred, abort() instead of exit() - to allow the user for tracing the problem. ---- a/libwcs/poly.c -+++ b/libwcs/poly.c -@@ -43,7 +43,7 @@ - void qerror(char *msg1, char *msg2) - { - fprintf(stderr, "\n> %s%s\n\n",msg1,msg2); -- exit(-1); -+ abort(); - } - - diff --git a/sci-astronomy/wcstools/files/wcstools-3.9.2-wcsinit_crash.patch b/sci-astronomy/wcstools/files/wcstools-3.9.2-wcsinit_crash.patch deleted file mode 100644 index f8de3da..0000000 --- a/sci-astronomy/wcstools/files/wcstools-3.9.2-wcsinit_crash.patch +++ /dev/null @@ -1,20 +0,0 @@ -Author: Ole Streicher <olebole@debian.net> -Description: Increase c*type and ptype field string lengths - This is needed to allow C1TYPE='RA---TAN-SIP' -Bug: https://bugs.launchpad.net/ubuntu/+source/saods9/+bug/1458333 ---- a/libwcs/wcsinit.c -+++ b/libwcs/wcsinit.c -@@ -399,11 +399,11 @@ - } - - /* World coordinate system reference coordinate information */ -- if (hgetsc (hstring, "CTYPE1", &mchar, 16, ctype1)) { -+ if (hgetsc (hstring, "CTYPE1", &mchar, 9, ctype1)) { - - /* Read second coordinate type */ - strcpy (ctype2, ctype1); -- if (!hgetsc (hstring, "CTYPE2", &mchar, 16, ctype2)) -+ if (!hgetsc (hstring, "CTYPE2", &mchar, 9, ctype2)) - twod = 0; - else - twod = 1; diff --git a/sci-astronomy/wcstools/files/wcstools.pc.in b/sci-astronomy/wcstools/files/wcstools.pc.in deleted file mode 100644 index c8eb8b0..0000000 --- a/sci-astronomy/wcstools/files/wcstools.pc.in +++ /dev/null @@ -1,13 +0,0 @@ -prefix=@prefix@ -exec_prefix=@exec_prefix@ -libdir=@libdir@ -includedir=@includedir@ - -Name: @PACKAGE_NAME@ -Description: World Coordinate System Library and Tools -Version: @PACKAGE_VERSION@ -URL: http://tdc-www.harvard.edu/wcstools/ -Libs: -L${libdir} -lwcstools -Libs.private: -lm -Cflags: -I${includedir}/wcs - diff --git a/sci-astronomy/wcstools/metadata.xml b/sci-astronomy/wcstools/metadata.xml deleted file mode 100644 index 94f4f60..0000000 --- a/sci-astronomy/wcstools/metadata.xml +++ /dev/null @@ -1,20 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<maintainer type="project"> - <email>sci-astronomy@gentoo.org</email> - <name>Gentoo Astronomy Project</name> -</maintainer> -<longdescription lang="en"> - Astronomers often need to relate positions on an image of the sky to - positions on the real sky to identify catalogued objects in images, - tell other people where to look to find an identified object, or to - compute motions of planets, satellites, asteroids, or comets. WCSTools - is a package of programs and a library of utility subroutines for - setting and using the world coordinate systems (WCS) in the headers of - the most common astronomical image formats, FITS and IRAF .imh, to - relate image pixels to sky coordinates. - The Gentoo package is using GNU autotools to produce portable shared - and static libraried. -</longdescription> -</pkgmetadata> diff --git a/sci-astronomy/wcstools/wcstools-3.9.2.ebuild b/sci-astronomy/wcstools/wcstools-3.9.2.ebuild deleted file mode 100644 index 38c7d89..0000000 --- a/sci-astronomy/wcstools/wcstools-3.9.2.ebuild +++ /dev/null @@ -1,74 +0,0 @@ -# Copyright 1999-2016 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -AUTOTOOLS_AUTORECONF=1 -AUTOTOOLS_IN_SOURCE_BUILD=1 - -inherit eutils autotools-utils multilib - -DESCRIPTION="World Coordinate System library for astronomical FITS images" -HOMEPAGE="http://tdc-www.harvard.edu/software/wcstools" -SRC_URI="${HOMEPAGE}/${P}.tar.gz" - -LICENSE="GPL-2 LGPL-2.1" -SLOT="0" -KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" -IUSE="" - -DOCS=( Readme Programs NEWS ) - -PATCHES=( - "${FILESDIR}"/wcstools-3.9.2-compiler_warnings.patch - "${FILESDIR}"/wcstools-3.9.2-manpages.patch - "${FILESDIR}"/wcstools-3.9.2-mayhem.patch - "${FILESDIR}"/wcstools-3.9.2-RASortStars.patch - "${FILESDIR}"/wcstools-3.9.2-spelling.patch - "${FILESDIR}"/wcstools-3.9.2-sprintf.patch - "${FILESDIR}"/wcstools-3.9.2-use_abort.patch - "${FILESDIR}"/wcstools-3.9.2-wcsinit_crash.patch -) - -src_prepare() { - einfo "Copying gentoo autotools files" - local f - for f in "${FILESDIR}"/{configure.ac,wcstools.pc.in,Makefile.am}; do - cp ${f} "${S}"/ || die - done - cp "${FILESDIR}"/Makefile.libwcs.am "${S}"/libwcs/Makefile.am || die - # avoid colliding with fixdos, getdate and remap from other packages - sed -i \ - -e 's/getdate/wcsgetdate/' \ - -e 's/crlf/wcscrlf/' \ - -e 's/remap/wcsremap/' \ - -e "s/3.... Programs/${PV} Programs/" \ - wcstools || die - autotools-utils_src_prepare -} - -src_test() { - einfo "Testing various wcstools programs" - ./newfits -a 10 -j 248 41 -p 0.15 test.fits || die "test newfits failed" - ./sethead test.fits A=1 B=1 || die "test sethead failed" - [[ "$(./gethead test.fits RA)" == "16:32:00.0000" ]] \ - || die "test gethead failed" - rm test.fits -} - -src_install() { - autotools-utils_src_install - doman man/man1/* - newdoc libwcs/NEWS NEWS.libwcs - newdoc libwcs/Readme Readme.libwcs - -} - -pkg_postinst() { - elog "The following execs have been renamed to avoid colliding" - elog "with other packages:" - elog " getdate -> wcsgetdate" - elog " crlf -> wcscrlf" - elog " remap -> wcsremap" -} diff --git a/sci-libs/cfitsio/Manifest b/sci-libs/cfitsio/Manifest deleted file mode 100644 index d92d091..0000000 --- a/sci-libs/cfitsio/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST cfitsio-3.37.tar.gz 4135218 SHA256 68058d5c805a3a63f3fe62dafcc8cc80afe2e2b34e10e16a9b1fb38376c0acbf SHA512 31ec98cc700dad0deabbb7349b1a018d2d4aa79ae3f70fa28397bb43b1420c7107697443bc2bd43c88b372477676d9f8c22a6731114d51379312faf6d0936752 WHIRLPOOL b18921d174248a35186b3457ede8858a48136568d03cfda37a29d968cc43c817dd956d95e9f18f4d214b1ce36a2c564e9369d2e4fed562e19c7eb48992735783 diff --git a/sci-libs/cfitsio/cfitsio-3.37.ebuild b/sci-libs/cfitsio/cfitsio-3.37.ebuild deleted file mode 100644 index 17085d1..0000000 --- a/sci-libs/cfitsio/cfitsio-3.37.ebuild +++ /dev/null @@ -1,60 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -FORTRAN_NEEDED=fortran - -inherit autotools-multilib fortran-2 - -DESCRIPTION="C and Fortran library for manipulating FITS files" -HOMEPAGE="http://heasarc.gsfc.nasa.gov/docs/software/fitsio/fitsio.html" -SRC_URI="https://dev.gentoo.org/~bicatali/distfiles/${P}.tar.gz" - -LICENSE="MIT" -SLOT="0/2" -KEYWORDS="~alpha ~amd64 ~hppa ~ppc ~ppc64 ~sparc ~x86 ~x64-freebsd ~amd64-linux ~x86-linux ~ppc-macos ~x64-macos ~x86-macos ~sparc-solaris ~sparc64-solaris" -IUSE="bzip2 doc examples fortran static-libs +tools threads" - -RDEPEND=" - sys-libs/zlib[${MULTILIB_USEDEP}] - bzip2? ( app-arch/bzip2[${MULTILIB_USEDEP}] )" -DEPEND="${RDEPEND} - fortran? ( dev-lang/cfortran )" - -pkg_setup() { - use fortran && fortran-2_pkg_setup -} - -src_prepare() { - # avoid internal cfortran - if use fortran; then - mv cfortran.h cfortran.h.disabled - ln -s "${EPREFIX}"/usr/include/cfortran.h . || die - fi - autotools-multilib_src_prepare -} - -src_configure() { - local myeconfargs=( - $(use_enable fortran) - $(use_enable threads) - $(use_enable tools) - $(use_with bzip2) - ) - autotools-multilib_src_configure -} - -src_install () { - autotools-multilib_src_install - dodoc README README.md CHANGES.md docs/changes.txt docs/cfitsio.doc - use fortran && dodoc docs/fitsio.doc - use doc && dodoc docs/{quick,cfitsio,fpackguide}.pdf - use doc && use fortran && dodoc docs/fitsio.pdf - if use examples; then - insinto /usr/share/doc/${PF}/examples - doins cookbook.c testprog.c speed.c smem.c - use fortran && doins cookbook.f testf77.f - fi -} diff --git a/sci-libs/cfitsio/metadata.xml b/sci-libs/cfitsio/metadata.xml deleted file mode 100644 index 3a1d7ee..0000000 --- a/sci-libs/cfitsio/metadata.xml +++ /dev/null @@ -1,18 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <herd>sci-astronomy</herd> - <longdescription lang="en"> - CFITSIO is a library of C and Fortran subroutines for reading and - writing data files in FITS (Flexible Image Transport System) data - format. CFITSIO provides simple high-level routines for reading and - writing FITS files that insulate the programmer from the internal - complexities of the FITS format. CFITSIO also provides advanced - features for manipulating and filtering the information in FITS - files. -</longdescription> - <use> - <flag name="tools">Build execs fpack, funpack, imcopy, fitscopy, listhead - </flag> - </use> -</pkgmetadata> diff --git a/sci-libs/netcdf-fortran/Manifest b/sci-libs/netcdf-fortran/Manifest deleted file mode 100644 index 8883ae9..0000000 --- a/sci-libs/netcdf-fortran/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST netcdf-fortran-4.4.2.tar.gz 1007725 SHA256 ad6249b6062df6f62f81d1cb2a072e3a4c595f27f11fe0c5a79726d1dad3143b SHA512 5479f369edd31b593a5dfa540edf4fe19890c26e8a6fcd23c3f8696eccc81de9f7ee8c85356f1da4891d71f1bf095fd0e0c74e4597b259bae0258e6ccf1b31d0 WHIRLPOOL 707c06a088fdde17d7b191e71ecedc67bab8646f1241c3220e7c7433e6cf04ee57a3974df9a6fee354080eb0c883e8c2fce6cd309b96a2a7f49cf22ebe4d1e11 diff --git a/sci-libs/netcdf-fortran/metadata.xml b/sci-libs/netcdf-fortran/metadata.xml deleted file mode 100644 index 1c9a839..0000000 --- a/sci-libs/netcdf-fortran/metadata.xml +++ /dev/null @@ -1,14 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci</herd> -<longdescription lang="en"> - NetCDF (network Common Data Form) is an interface for scientific - data access and a freely-distributed software library that provides an - implementation of the interface. The netCDF library also defines a - machine-independent format for representing scientific data. - Together, the interface, library, and format support the creation, - access, and sharing of scientific data. - This is the FORTRAN 77 and 90 library on top of the C library. -</longdescription> -</pkgmetadata> diff --git a/sci-libs/netcdf-fortran/netcdf-fortran-4.4.2.ebuild b/sci-libs/netcdf-fortran/netcdf-fortran-4.4.2.ebuild deleted file mode 100644 index fea4f21..0000000 --- a/sci-libs/netcdf-fortran/netcdf-fortran-4.4.2.ebuild +++ /dev/null @@ -1,53 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -FORTRAN_STANDARD="77 90 2003" - -inherit autotools-utils fortran-2 - -DESCRIPTION="Scientific library and interface for array oriented data access" -HOMEPAGE="http://www.unidata.ucar.edu/software/netcdf/" -SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/${P}.tar.gz" - -LICENSE="UCAR-Unidata" -SLOT="0/5" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="doc examples static-libs" - -RDEPEND="sci-libs/netcdf" -DEPEND="${RDEPEND} - dev-lang/cfortran - doc? ( app-doc/doxygen[dot] ) -" - -src_prepare() { - # use system cfortran - rm libsrc/cfortran.h || die - autotools-utils_src_prepare -} - -src_configure() { - local myeconfargs=( - --docdir="${EPREFIX}/usr/share/doc/${PF}" - --disable-extra-example-tests - --enable-f03 - $(use_enable doc dot) - $(use_enable doc doxygen) - ) - autotools-utils_src_configure -} - -src_test() { - autotools-utils_src_test -j1 -} - -src_install() { - autotools-utils_src_install - if use examples; then - insinto /usr/share/doc/${PF} - doins -r examples - fi -} diff --git a/sci-libs/netcdf/Manifest b/sci-libs/netcdf/Manifest deleted file mode 100644 index b947104..0000000 --- a/sci-libs/netcdf/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST netcdf-4.3.3.1.tar.gz 4999463 SHA256 bdde3d8b0e48eed2948ead65f82c5cfb7590313bc32c4cf6c6546e4cea47ba19 SHA512 a14e126ec3dcb4c7c68e82b20cd149f391ff9f2f733f19a93b159c1529e04ee2a66128962a4534cfe1f37e1c8a100f92def4f79069f5359c95a819715f62acef WHIRLPOOL 17d5ea91954fa85d110675066c04695739b4a36bd42eeeb14c678d7927dc1f22aadd075d10f754b3e4655c1cebd242fc80b6999c50b3660ec7334f4180bce3ee diff --git a/sci-libs/netcdf/metadata.xml b/sci-libs/netcdf/metadata.xml deleted file mode 100644 index d78394e..0000000 --- a/sci-libs/netcdf/metadata.xml +++ /dev/null @@ -1,18 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <herd>sci</herd> - <longdescription lang="en"> - NetCDF (network Common Data Form) is an interface for scientific - data access and a freely-distributed software library that provides an - implementation of the interface. The netCDF library also defines a - machine-independent format for representing scientific data. - Together, the interface, library, and format support the creation, - access, and sharing of scientific data. -</longdescription> - <use> - <flag name="dap">Support for remote data access with the built-in OPeNDAP client</flag> - <flag name="hdf">Add support for the Hierarchical Data Format v.4 <pkg>sci-libs/hdf</pkg></flag> - <flag name="tools">Build the utilities nccopy, ncgen and ncdump</flag> - </use> -</pkgmetadata> diff --git a/sci-libs/netcdf/netcdf-4.3.3.1.ebuild b/sci-libs/netcdf/netcdf-4.3.3.1.ebuild deleted file mode 100644 index 347d2b3..0000000 --- a/sci-libs/netcdf/netcdf-4.3.3.1.ebuild +++ /dev/null @@ -1,56 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -inherit autotools-utils - -DESCRIPTION="Scientific library and interface for array oriented data access" -HOMEPAGE="http://www.unidata.ucar.edu/software/netcdf/" -SRC_URI="ftp://ftp.unidata.ucar.edu/pub/netcdf/${P}.tar.gz" - -LICENSE="UCAR-Unidata" -SLOT="0/7" -KEYWORDS="~amd64 ~arm ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux" -IUSE="+dap doc examples hdf +hdf5 mpi static-libs szip test tools" - -RDEPEND=" - dap? ( net-misc/curl:0= ) - hdf? ( sci-libs/hdf:0= sci-libs/hdf5:0= ) - hdf5? ( sci-libs/hdf5:0=[mpi=,szip=,zlib] )" -DEPEND="${RDEPEND} - doc? ( app-doc/doxygen[dot] )" - -REQUIRED_USE="test? ( tools ) szip? ( hdf5 ) mpi? ( hdf5 )" - -src_configure() { - local myeconfargs=( - --docdir="${EPREFIX}"/usr/share/doc/${PF} - --disable-examples - --disable-dap-remote-tests - $(use_enable dap) - $(use_enable doc doxygen) - $(use_enable hdf hdf4) - $(use_enable hdf5 netcdf-4) - $(use_enable tools utilities) - ) - if use mpi; then - export CC=mpicc - myeconfargs+=( --enable-parallel ) - use test && myeconfargs+=( --enable-parallel-tests ) - fi - autotools-utils_src_configure -} - -src_test() { - autotools-utils_src_test -j1 -} - -src_install() { - autotools-utils_src_install - if use examples; then - insinto /usr/share/doc/${PF} - doins -r examples - fi -} |