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| author |   Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-08-31 23:19:31 +0200 |
|---|---|---|
| committer | Justin Lecher (jlec) <jlec@j-schmitz.net> | 2009-08-31 23:19:31 +0200 |
| commit | 1dc1efa56ec4f884694187683691cb3900bf18a5 (patch) | |
| tree | 2a7b17f08000452755531e236f268181b56a31a7 /sci-chemistry/coot/files | |
| parent | sci-libs/driftwood written by me (diff) | |
| download | sci-1dc1efa56ec4f884694187683691cb3900bf18a5.tar.gz sci-1dc1efa56ec4f884694187683691cb3900bf18a5.tar.bz2 sci-1dc1efa56ec4f884694187683691cb3900bf18a5.zip | |
prelimary src_test support for coot
Diffstat (limited to 'sci-chemistry/coot/files')
| -rw-r--r-- | sci-chemistry/coot/files/9999-check-include.patch | 23 | ||||
| -rw-r--r-- | sci-chemistry/coot/files/9999-check.patch | 81 |
2 files changed, 104 insertions, 0 deletions
diff --git a/sci-chemistry/coot/files/9999-check-include.patch b/sci-chemistry/coot/files/9999-check-include.patch new file mode 100644 index 000000000..feb5d86ca --- /dev/null +++ b/sci-chemistry/coot/files/9999-check-include.patch @@ -0,0 +1,23 @@ +diff -arNu -uarN work/auxil/catcheck/catcheck.cc work.new/auxil/catcheck/catcheck.cc +--- work/auxil/catcheck/catcheck.cc 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/catcheck/catcheck.cc 2009-08-31 23:08:22.000000000 +0200 +@@ -1,6 +1,7 @@ + + #include <unistd.h> + #include <iostream> ++#include <algorithm> + #include "catcheck.hh" + + int main(int argc, char **argv) { +diff -arNu -uarN work/auxil/strand-analysis/strand-analysis.cc work.new/auxil/strand-analysis/strand-analysis.cc +--- work/auxil/strand-analysis/strand-analysis.cc 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/strand-analysis/strand-analysis.cc 2009-08-31 23:08:40.000000000 +0200 +@@ -4,6 +4,8 @@ + + #include <unistd.h> + #include <iostream> ++#include <cstdlib> ++#include <cstring> + #include "strand-analysis.hh" + + int main(int argc, char **argv) { diff --git a/sci-chemistry/coot/files/9999-check.patch b/sci-chemistry/coot/files/9999-check.patch new file mode 100644 index 000000000..f38c5a556 --- /dev/null +++ b/sci-chemistry/coot/files/9999-check.patch @@ -0,0 +1,81 @@ +diff -arNu -uarN work/auxil/catcheck/catcheck.cc work.new/auxil/catcheck/catcheck.cc +--- work/auxil/catcheck/catcheck.cc 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/catcheck/catcheck.cc 2009-08-31 23:08:22.000000000 +0200 +@@ -1,6 +1,7 @@ + + #include <unistd.h> + #include <iostream> ++#include <algorithm> + #include "catcheck.hh" + + int main(int argc, char **argv) { +diff -arNu -uarN work/auxil/catcheck/Makefile.am work.new/auxil/catcheck/Makefile.am +--- work/auxil/catcheck/Makefile.am 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/catcheck/Makefile.am 2009-08-31 23:08:57.000000000 +0200 +@@ -4,3 +4,8 @@ + check_PROGRAMS = catcheck + + catcheck_SOURCES = catcheck.cc catcheck.hh ++ ++INCLUDES = $(CLIPPER_CXXFLAGS) $(MMDB_CXXFLAGS) ++ ++catcheck_LDADD = $(MMDB_LIBS) ++ +diff -arNu -uarN work/auxil/rama/Makefile.am work.new/auxil/rama/Makefile.am +--- work/auxil/rama/Makefile.am 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/rama/Makefile.am 2009-08-31 23:09:14.000000000 +0200 +@@ -5,3 +5,7 @@ + + rama_data_SOURCES = rama-data.cc + rama_doughnut_SOURCES = rama-doughnut.cc ++ ++rama_data_LDADD = $(CLIPPER_LIBS) ++rama_doughnut_LDADD = $(CLIPPER_LIBS) ++ +diff -arNu -uarN work/auxil/sec-str/Makefile.am work.new/auxil/sec-str/Makefile.am +--- work/auxil/sec-str/Makefile.am 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/sec-str/Makefile.am 2009-08-31 23:09:54.000000000 +0200 +@@ -5,5 +5,7 @@ + + sec_str_dist_check_SOURCES = sec-str-dist-check.cc sec-str-dist-check.hh + +- ++INCLUDES = $(CLIPPER_CXXFLAGS) $(MMDB_CXXFLAGS) ++ ++sec_str_dist_check_LDADD = $(MMDB_LIBS) $(CLIPPER_LIBS) + +diff -arNu -uarN work/auxil/strand-analysis/Makefile.am work.new/auxil/strand-analysis/Makefile.am +--- work/auxil/strand-analysis/Makefile.am 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/strand-analysis/Makefile.am 2009-08-31 23:10:07.000000000 +0200 +@@ -2,7 +2,7 @@ + EXTRA_DIST = Makefile.simple + + +-INCLUDES = -I$(top_srcdir)/aux/sec-str \ ++INCLUDES = -I$(top_srcdir)/auxil/sec-str \ + $(MMDB_CXXFLAGS) \ + $(CLIPPER_CXXFLAGS) + +diff -arNu -uarN work/auxil/strand-analysis/strand-analysis.cc work.new/auxil/strand-analysis/strand-analysis.cc +--- work/auxil/strand-analysis/strand-analysis.cc 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/strand-analysis/strand-analysis.cc 2009-08-31 23:08:40.000000000 +0200 +@@ -4,6 +4,8 @@ + + #include <unistd.h> + #include <iostream> ++#include <cstdlib> ++#include <cstring> + #include "strand-analysis.hh" + + int main(int argc, char **argv) { +diff -arNu -uarN work/auxil/vectors/Makefile.am work.new/auxil/vectors/Makefile.am +--- work/auxil/vectors/Makefile.am 2009-08-31 23:07:25.000000000 +0200 ++++ work.new/auxil/vectors/Makefile.am 2009-08-31 23:10:22.000000000 +0200 +@@ -5,3 +5,7 @@ + + diff_vec_SOURCES = diff-vec.cc + ++INCLUDES = $(CLIPPER_CXXFLAGS) $(MMDB_CXXFLAGS) ++ ++diff_vec_LDADD = $(MMDB_LIBS) $(CLIPPER_LIBS) ++ |