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| author |   Justin Lecher <jlec@gentoo.org> | 2011-06-15 17:24:51 +0200 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2011-06-15 17:24:51 +0200 |
| commit | df5c5e7ff841c1a20bb841e5c4da4dc398cfe9bc (patch) | |
| tree | 75311d99f653c444d60315412f79f41fe790f05b /sci-chemistry/coot/files | |
| parent | fortan-2.eclass in progress (diff) | |
| download | sci-df5c5e7ff841c1a20bb841e5c4da4dc398cfe9bc.tar.gz sci-df5c5e7ff841c1a20bb841e5c4da4dc398cfe9bc.tar.bz2 sci-df5c5e7ff841c1a20bb841e5c4da4dc398cfe9bc.zip | |
Updated to current HEAD
(Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-chemistry/coot/files')
| -rw-r--r-- | sci-chemistry/coot/files/9999-align.patch | 29 |
1 files changed, 0 insertions, 29 deletions
diff --git a/sci-chemistry/coot/files/9999-align.patch b/sci-chemistry/coot/files/9999-align.patch deleted file mode 100644 index 17e57877d..000000000 --- a/sci-chemistry/coot/files/9999-align.patch +++ /dev/null @@ -1,29 +0,0 @@ -Index: src/c-interface-mutate.cc -=================================================================== ---- src/c-interface-mutate.cc (revision 3528) -+++ src/c-interface-mutate.cc (working copy) -@@ -292,7 +292,9 @@ - PyObject *r = Py_False; - if (is_valid_model_molecule(imol)) { - std::pair<bool, std::string> p = -- graphics_info_t::molecules[imol].find_terminal_residue_type(chain_id, resno); -+ graphics_info_t::molecules[imol].find_terminal_residue_type(chain_id, resno, -+ graphics_info_t::alignment_wgap, -+ graphics_info_t::alignment_wspace); - if (p.first) { - r = PyString_FromString(p.second.c_str()); - } -Index: src/c-interface-validate.cc -=================================================================== ---- src/c-interface-validate.cc (revision 3528) -+++ src/c-interface-validate.cc (working copy) -@@ -1653,7 +1653,8 @@ - - if (is_valid_model_molecule(imol)) { - std::pair<bool, std::vector<coot::chain_mutation_info_container_t> > ar = -- graphics_info_t::molecules[imol].residue_mismatches(); -+ graphics_info_t::molecules[imol].residue_mismatches(graphics_info_t::alignment_wgap, -+ graphics_info_t::alignment_wspace); - if (ar.first) - r = PyList_New(0); - for (unsigned int ir=0; ir<ar.second.size(); ir++) { |