aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJustin Lecher (jlec) <jlec@j-schmitz.net>2009-04-26 11:21:05 +0200
committerJustin Lecher (jlec) <jlec@j-schmitz.net>2009-04-26 11:21:05 +0200
commit3a500416770ff4296e365fc53d9c67f03afa9d51 (patch)
treebbdea8bac278cd371001dc44dc7353f658eeba7e /scripts
parentfirst version of automatic bump script for blast-dbs checked in (diff)
downloadsci-3a500416770ff4296e365fc53d9c67f03afa9d51.tar.gz
sci-3a500416770ff4296e365fc53d9c67f03afa9d51.tar.bz2
sci-3a500416770ff4296e365fc53d9c67f03afa9d51.zip
moved scripts from Documentation to scripts
Diffstat (limited to 'scripts')
-rw-r--r--scripts/generate_boinc-src_tarball.sh126
-rwxr-xr-xscripts/stage-db41
2 files changed, 167 insertions, 0 deletions
diff --git a/scripts/generate_boinc-src_tarball.sh b/scripts/generate_boinc-src_tarball.sh
new file mode 100644
index 000000000..0099ce9e8
--- /dev/null
+++ b/scripts/generate_boinc-src_tarball.sh
@@ -0,0 +1,126 @@
+#!/usr/bin/env bash
+## $Id: export-tarball 8916 2005-11-23 18:09:55Z korpela $
+## Modified by jlec 2009-04-13
+###############################################################################
+# functions
+###############################################################################
+# print out help function
+help() {
+ echo "Welcome to Boinc tarball generator"
+ echo
+ echo "For correct usage set VERSION argument"
+ echo "Example:"
+ echo "$0 -v 6.1.1"
+ exit 0
+}
+###############################################################################
+# argument passing
+###############################################################################
+if [[ $1 == "--help" ]]; then
+ help
+fi
+while getopts v: arg ; do
+ case $arg in
+ v) VERSION=${OPTARG};;
+ *) help;;
+ esac
+done
+if [ -z "${VERSION}" ]; then
+ help
+fi
+###############################################################################
+# variable definition
+###############################################################################
+SVN_URI="http://boinc.berkeley.edu/svn/tags/boinc_core_release_${VERSION//./_}"
+PACKAGE="boinc-${VERSION}"
+BUNDLE_PREFIX="boinc-dist"
+LOG=linux.log
+###############################################################################
+# prepare enviroment
+###############################################################################
+mkdir ${BUNDLE_PREFIX} -p
+rm -rf $PACKAGE/"${BUNDLE_PREFIX}"/* # CLEANUP
+cd "${BUNDLE_PREFIX}"
+touch "${LOG}"
+echo "" > "${LOG}" # LOG CLEANUP
+###############################################################################
+# get data from svn
+###############################################################################
+echo "<Downloading files from SVN repository>"
+echo "<******************************>"
+svn export ${SVN_URI} ${PACKAGE} >> "${LOG}"
+###############################################################################
+# cleanup files we fetched
+###############################################################################
+echo "<Cleaning up data we fetched>"
+echo "<******************************>"
+# we create tarball for linux so cleanup mess
+# bundled zlib library
+rm -rf $PACKAGE/zlib/
+# bundled zip libs
+rm -rf $PACKAGE/zip/{zip,unzip}
+# bundled openssl stuff
+rm -rf $PACKAGE/openssl/
+# smash html
+rm -rf $PACKAGE/html/
+# bundled curl
+rm -rf $PACKAGE/curl/
+# other platforms stuff
+rm -rf $PACKAGE/win_build/
+rm -rf $PACKAGE/mac_{installer,build}/
+rm -rf $PACKAGE/clientgui/{mac,msw}/
+rm -rf $PACKAGE/client/{os2,win}/
+rm -rf $PACKAGE/lib/mac/
+# we never ever will do documentation stuff
+rm -rf $PACKAGE/doc/
+
+# fix search for unwanted stuff
+sed -i \
+ -e '/^.\/unzip/d' \
+ -e '/^.\/zip/d' \
+ -e '/^SUBDIRS/d' \
+ -e "s:-I\$(top_srcdir)/zip/zip::g" \
+ -e "s:-I\$(top_srcdir)/zlib::g" \
+ -e "s:-I\$(top_srcdir)/zip/unzip::g" \
+ -e 's:\\::g' \
+ "$PACKAGE"/zip/Makefile.am
+echo 'libboinc_zip_a_LIBADD = $(libdir)/libunzip.a $(libdir)/libzip.a' >> \
+ "$PACKAGE"/zip/Makefile.am
+sed -i \
+ -e 's:"./zip/zip.h":<zip.h>:g' \
+ -e 's:"./unzip/unzip.h":<unzip.h>:g' \
+ "$PACKAGE"/zip/*.cpp
+sed -i \
+ -e "s:win_build::g" \
+ -e "s:doc::g" \
+ "$PACKAGE"/Makefile.am
+sed -i \
+ -e "s:zip/unzip/Makefile::g" \
+ -e "s:zip/zip/Makefile::g" \
+ -e "s:doc/manpages/Makefile::g" \
+ -e "s:doc/Makefile::g" \
+ -e "sXclient/win/boinc_path_config.py:py/Boinc/boinc_path_config.py.inXXg" \
+ "$PACKAGE"/configure.ac
+# fix the server build
+sed -i \
+ -e "s:samples/example_app::g" \
+ "$PACKAGE"/Makefile.am
+sed -i \
+ -e "s:sched apps tools samples/example_app:sched apps tools:g" \
+ "$PACKAGE"/Makefile.in
+pushd "$PACKAGE"/
+./_autosetup
+popd
+###############################################################################
+# create tbz
+###############################################################################
+tar cjf "${PACKAGE}".tar.bz2 ${PACKAGE} >> "${LOG}"
+find ./ -maxdepth 1 -type f -name \*.tar.bz2 -print | while read FILE ; do
+ echo "FILE: ${FILE}"
+ echo " SIZE: $(`which du` -h ${FILE} |`which awk` -F' ' '{print $1}')"
+ echo " MD5SUM: $(`which md5sum` ${FILE} |`which awk` -F' ' '{print $1}')"
+ echo " SHA1SUM: $(`which sha1sum` ${FILE} |`which awk` -F' ' '{print $1}')"
+ echo
+done
+echo "<<<All done>>>"
+###############################################################################
diff --git a/scripts/stage-db b/scripts/stage-db
new file mode 100755
index 000000000..e3722cfee
--- /dev/null
+++ b/scripts/stage-db
@@ -0,0 +1,41 @@
+#!/bin/bash
+
+DATE=$(date "+%Y%m%d")
+CHANGE_ENTRY="automatic bump"
+
+# Find the Documentation dir from sci overlay
+
+if [[ -f $(basename $0) ]]; then
+ REPO_DOC=$(pwd)
+else
+ REPO_DOC=$(dirname $0)
+fi
+
+
+cd /tmp;
+wget http://www.ncbi.nlm.nih.gov/blast/docs/update_blastdb.pl >& /dev/null
+
+# Ask for which database
+
+echo "Which db should be updated ?"
+echo ""
+perl -w update_blastdb.pl --passiv --showall
+echo ""
+read DB
+
+
+# Fetch the database and rename it
+
+perl -w update_blastdb.pl --passiv ${DB}
+
+for mydb in ${DB}*; do
+ mv ${mydb} ${mydb#.tar.gz}-${DATE}.tar.gz
+done
+
+cd ${REPO_DOC}/../sci-libs/blast-db-${DB};
+git mv blast-db-${DB}*ebuild blast-db-${DB}-${DATE}.ebuild
+git add .
+echangelog "${CHANGE_ENTRY}"
+reapoman -d -v fix
+git add .
+