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authorMichał Górny <mgorny@gentoo.org>2019-12-15 21:17:11 +0100
committerMichał Górny <mgorny@gentoo.org>2019-12-15 21:24:01 +0100
commitbf101200a27bdd2f2bd075bf014c73ace1330bc3 (patch)
tree9562440807553f545f0dc01afa955d6fe0ba9c0a /sci-biology/bioperl
parentnet-misc/clusterssh: Switch to git-r3 (diff)
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sci-biology/bioperl: Drop unmaintained -9999
Signed-off-by: Michał Górny <mgorny@gentoo.org>
Diffstat (limited to 'sci-biology/bioperl')
-rw-r--r--sci-biology/bioperl/bioperl-9999-r1.ebuild73
1 files changed, 0 insertions, 73 deletions
diff --git a/sci-biology/bioperl/bioperl-9999-r1.ebuild b/sci-biology/bioperl/bioperl-9999-r1.ebuild
deleted file mode 100644
index f166946c008f..000000000000
--- a/sci-biology/bioperl/bioperl-9999-r1.ebuild
+++ /dev/null
@@ -1,73 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="5"
-
-inherit perl-module git-2
-
-SUBPROJECTS="+db +network +run"
-
-DESCRIPTION="Perl tools for bioinformatics - Core modules"
-HOMEPAGE="http://www.bioperl.org/"
-SRC_URI=""
-EGIT_REPO_URI="https://github.com/${PN}/${PN}-live.git"
-
-LICENSE="Artistic GPL-2"
-SLOT="0"
-KEYWORDS=""
-IUSE="-minimal graphviz ${SUBPROJECTS}"
-
-CDEPEND="
- dev-perl/Data-Stag
- dev-perl/libwww-perl
- !minimal? (
- dev-perl/Ace
- dev-perl/Bio-ASN1-EntrezGene
- dev-perl/Spreadsheet-ParseExcel
- dev-perl/Spreadsheet-WriteExcel
- >=dev-perl/XML-SAX-0.15
- dev-perl/Graph
- dev-perl/SOAP-Lite
- dev-perl/Array-Compare
- dev-perl/SVG
- dev-perl/XML-Simple
- dev-perl/XML-Parser
- dev-perl/XML-Twig
- >=dev-perl/HTML-Parser-3.60
- >=dev-perl/XML-Writer-0.4
- dev-perl/Clone
- dev-perl/XML-DOM
- dev-perl/Set-Scalar
- dev-perl/XML-XPath
- dev-perl/XML-DOM-XPath
- dev-perl/Algorithm-Munkres
- dev-perl/Data-Stag
- dev-perl/Math-Random
- dev-perl/PostScript
- dev-perl/Convert-Binary-C
- dev-perl/SVG-Graph
- )
- graphviz? ( dev-perl/GraphViz )"
-DEPEND="dev-perl/Module-Build
- ${CDEPEND}"
-RDEPEND="${CDEPEND}"
-PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene )
- db? ( >=sci-biology/bioperl-db-${PV} )
- network? ( >=sci-biology/bioperl-network-${PV} )
- run? ( >=sci-biology/bioperl-run-${PV} )"
-
-S="${WORKDIR}/BioPerl-${PV}"
-
-src_configure() {
- sed -i -e '/add_post_install_script.*symlink_script.pl/d' \
- -e "/'CPAN' *=> *1.81/d" "${S}/Build.PL" \
- -e "/'ExtUtils::Manifest' *=> *'1.52'/d" "${S}/Build.PL" \
- || die
- if use minimal && use graphviz; then die "USE flags minimal and graphviz cannot be used together"; fi
- perl-module_src_configure
-}
-
-src_install() {
- mydoc="AUTHORS BUGS FAQ"
- perl-module_src_install
-}