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authorBrahmajit Das <brahmajit.xyz@gmail.com>2023-06-17 06:22:09 +0000
committerAndrew Ammerlaan <andrewammerlaan@gentoo.org>2023-09-11 09:37:27 +0200
commit40119f3fb7d6b6327d75d40be30a5cbc2b9dc6e4 (patch)
tree29500f8260db9bc8baa76e1cc2851d589e41a3ad /sci-biology/pilercr
parentmedia-sound/qsampler: bump to 0.9.11 (diff)
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sci-biology/pilercr: Fix error: ISO C++17 does not allow register storage class specifier
Closes: https://bugs.gentoo.org/898124 Signed-off-by: Brahmajit Das <brahmajit.xyz@gmail.com> Closes: https://github.com/gentoo/gentoo/pull/31498 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
Diffstat (limited to 'sci-biology/pilercr')
-rw-r--r--sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch14
-rw-r--r--sci-biology/pilercr/pilercr-1.0-r3.ebuild29
2 files changed, 43 insertions, 0 deletions
diff --git a/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch b/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch
new file mode 100644
index 000000000000..ab1535b4a767
--- /dev/null
+++ b/sci-biology/pilercr/files/pilercr-1.0-drop-registers.patch
@@ -0,0 +1,14 @@
+--- a/comp.cpp
++++ b/comp.cpp
+@@ -28,7 +28,7 @@ void Complement(char *seq, int len)
+ /* Complement and reverse sequence */
+
+
+- { register unsigned char *s, *t;
++ { unsigned char *s, *t;
+ int c;
+
+
+old mode 100644
+new mode 100755
+Binary files a/pilercr and b/pilercr differ
diff --git a/sci-biology/pilercr/pilercr-1.0-r3.ebuild b/sci-biology/pilercr/pilercr-1.0-r3.ebuild
new file mode 100644
index 000000000000..5e73cddf5a10
--- /dev/null
+++ b/sci-biology/pilercr/pilercr-1.0-r3.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2023 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+inherit toolchain-funcs
+
+DESCRIPTION="Analysis of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs)"
+HOMEPAGE="http://www.drive5.com/pilercr/"
+SRC_URI="http://www.drive5.com/pilercr/pilercr1.06.tar.gz -> ${P}.tar.gz"
+S="${WORKDIR}"
+
+LICENSE="public-domain"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+PATCHES=(
+ "${FILESDIR}"/${PN}-1.0-fix-build-system.patch
+ "${FILESDIR}"/${PN}-1.0-gcc43.patch
+ "${FILESDIR}"/${PN}-1.0-drop-registers.patch
+)
+
+src_configure() {
+ tc-export CXX
+}
+
+src_install() {
+ dobin pilercr
+}