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Diffstat (limited to 'dev-lang/R/R-2.14.0.ebuild')
| -rw-r--r-- | dev-lang/R/R-2.14.0.ebuild | 182 |
1 files changed, 182 insertions, 0 deletions
diff --git a/dev-lang/R/R-2.14.0.ebuild b/dev-lang/R/R-2.14.0.ebuild new file mode 100644 index 0000000..ff285ea --- /dev/null +++ b/dev-lang/R/R-2.14.0.ebuild @@ -0,0 +1,182 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/dev-lang/R/R-2.14.0.ebuild,v 1.1 2011/11/21 16:22:52 jlec Exp $ + +EAPI=4 + +inherit bash-completion-r1 eutils flag-o-matic fortran-2 versionator + +DESCRIPTION="Language and environment for statistical computing and graphics" +HOMEPAGE="http://www.r-project.org/" +SRC_URI=" + mirror://cran/src/base/R-2/${P}.tar.gz + bash-completion? ( mirror://gentoo/R.bash_completion.bz2 )" + +LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1" +SLOT="0" +KEYWORDS="~amd64-linux" +IUSE="bash-completion cairo doc java jpeg lapack minimal nls openmp perl png profile readline static-libs tk X" + +# common depends +CDEPEND=" + app-arch/bzip2 + app-text/ghostscript-gpl + dev-libs/libpcre + || ( >=net-libs/libtirpc-0.2.2-r1 <sys-libs/glibc-2.14 sys-freebsd/freebsd-lib ) + virtual/blas + cairo? ( x11-libs/cairo[X] ) + jpeg? ( virtual/jpeg ) + lapack? ( virtual/lapack ) + perl? ( dev-lang/perl ) + png? ( media-libs/libpng ) + readline? ( sys-libs/readline ) + tk? ( dev-lang/tk ) + X? ( x11-libs/libXmu x11-misc/xdg-utils )" + +DEPEND="${CDEPEND} + dev-util/pkgconfig + doc? ( + virtual/latex-base + dev-texlive/texlive-fontsrecommended + )" + +RDEPEND="${CDEPEND} + ( || ( <sys-libs/zlib-1.2.5.1-r1 >=sys-libs/zlib-1.2.5.1-r2[minizip] ) ) + app-arch/xz-utils + java? ( >=virtual/jre-1.5 )" + +RESTRICT="minimal? ( test )" + +R_DIR="${EPREFIX}/usr/$(get_libdir)/${PN}" + +pkg_setup() { + if use openmp; then + FORTRAN_NEED_OPENMP=1 + tc-has-openmp || die "Please enable openmp support in your compiler" + fi + fortran-2_pkg_setup + filter-ldflags -Wl,-Bdirect -Bdirect + # avoid using existing R installation + unset R_HOME +} + +src_prepare() { + # fix ocasional failure with parallel install (bug #322965) + # upstream in R-2.13? + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14505 + epatch "${FILESDIR}"/${PN}-2.11.1-parallel.patch + # respect ldflags on rscript + # upstream does not want it, no reasons given + # https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14506 + epatch "${FILESDIR}"/${PN}-2.12.1-ldflags.patch + # update for zlib header changes (see bug #383431) + epatch "${FILESDIR}"/${PN}-2.13.1-zlib_header_fix.patch + + # glibc 2.14 removed rpc + if has_version '>=net-libs/libtirpc-0.2.2-r1'; then + append-cppflags $($(tc-getPKG_CONFIG) libtirpc --cflags) + export LIBS+=" $($(tc-getPKG_CONFIG) libtirpc --libs)" + # patching configure.ac would cause way too much work + # ugly hack on configure and let upstream do the job + sed -i -e "s/'' nsl;/'' tirpc;/" configure || die + fi + + # fix packages.html for doc (bug #205103) + # check in later versions if fixed + sed -i \ + -e "s:../../library:../../../../$(get_libdir)/R/library:g" \ + src/library/tools/R/Rd.R \ + || die "sed failed" + + # fix Rscript + sed -i \ + -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${R_DIR}\"':" \ + src/unix/Makefile.in || die "sed unix Makefile failed" + + # fix HTML links to manual (bug #273957) + sed -i -e 's:\.\./manual/:manual/:g' $(grep -Flr ../manual/ doc) \ + || die "sed for HTML links to manual failed" + + use lapack && \ + export LAPACK_LIBS="$(pkg-config --libs lapack)" + + if use X; then + export R_BROWSER="$(type -p xdg-open)" + export R_PDFVIEWER="$(type -p xdg-open)" + fi + use perl && \ + export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}" +} + +src_configure() { + econf \ + --enable-byte-compiled-packages \ + --enable-R-shlib \ + --with-system-zlib \ + --with-system-bzlib \ + --with-system-pcre \ + --with-system-xz \ + --with-blas="$(pkg-config --libs blas)" \ + --docdir="${EPREFIX}/usr/share/doc/${PF}" \ + rdocdir="${EPREFIX}/usr/share/doc/${PF}" \ + $(use_enable openmp) \ + $(use_enable nls) \ + $(use_enable profile R-profiling) \ + $(use_enable profile memory-profiling) \ + $(use_enable static-libs static) \ + $(use_enable static-libs R-static-lib) \ + $(use_with lapack) \ + $(use_with tk tcltk) \ + $(use_with jpeg jpeglib) \ + $(use_with !minimal recommended-packages) \ + $(use_with png libpng) \ + $(use_with readline) \ + $(use_with cairo) \ + $(use_with X x) +} + +src_compile(){ + export VARTEXFONTS="${T}/fonts" + emake + RMATH_V=0.0.0 + emake -C src/nmath/standalone \ + libRmath_la_LDFLAGS="-Wl,-soname,libRmath.so.${RMATH_V}" \ + libRmath_la_LIBADD="\$(LIBM)" \ + shared $(use static-libs && echo static) + use doc && emake info pdf +} + +src_install() { + default + if use doc; then + emake DESTDIR="${D}" install-info install-pdf + dosym ../manual /usr/share/doc/${PF}/html/manual + fi + + # standalone math lib install (-j1 basically harmless) + emake \ + -C src/nmath/standalone \ + DESTDIR="${ED}" install + + local mv=$(get_major_version ${RMATH_V}) + mv "${ED}"/usr/$(get_libdir)/libRmath.so \ + "${ED}"/usr/$(get_libdir)/libRmath.so.${RMATH_V} + dosym libRmath.so.${RMATH_V} /usr/$(get_libdir)/libRmath.so.${mv} + dosym libRmath.so.${mv} /usr/$(get_libdir)/libRmath.so + + # env file + cat > 99R <<-EOF + LDPATH=${R_DIR}/lib + R_HOME=${R_DIR} + EOF + doenvd 99R + use bash-completion && dobashcomp "${WORKDIR}"/R.bash_completion +} + +pkg_postinst() { + if use java; then + einfo "Re-initializing java paths for ${P}" + R CMD javareconf + fi + bash-completion-r1_pkg_postinst +} |