diff options
| author |   Horea Christian <chr@chymera.eu> | 2020-09-27 18:37:20 -0400 |
|---|---|---|
| committer | Horea Christian <chr@chymera.eu> | 2020-09-27 18:43:20 -0400 |
| commit | 445e6bd8a1fbcd0c93bd0509a467b6bb75a1d265 (patch) | |
| tree | d0ceb77838e15df85466dfba18b9419107306348 | |
| parent | sci-biology/Atlas-Link: removed discontinued package (diff) | |
| download | sci-445e6bd8.tar.gz sci-445e6bd8.tar.bz2 sci-445e6bd8.zip | |
sci-biology/Atlas_GapFill: removed discontinued package
Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr@chymera.eu>
| -rw-r--r-- | sci-biology/Atlas_GapFill/Atlas_GapFill-2.2.ebuild | 23 | ||||
| -rw-r--r-- | sci-biology/Atlas_GapFill/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/Atlas_GapFill/metadata.xml | 12 |
3 files changed, 0 insertions, 37 deletions
diff --git a/sci-biology/Atlas_GapFill/Atlas_GapFill-2.2.ebuild b/sci-biology/Atlas_GapFill/Atlas_GapFill-2.2.ebuild deleted file mode 100644 index 935134f09..000000000 --- a/sci-biology/Atlas_GapFill/Atlas_GapFill-2.2.ebuild +++ /dev/null @@ -1,23 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -DESCRIPTION="Close gaps using BWA-identified reads and reassemble" -HOMEPAGE="https://www.hgsc.bcm.edu/software/atlas-gapfill" -SRC_URI=" - https://www.hgsc.bcm.edu/sites/default/files/software/ATLAS_GapFill_V2_2/ATLAS_GapFill_V2.2_release.tar.bz2 - https://www.hgsc.bcm.edu/sites/default/files/software/ATLAS_GapFill_V2_2/README -> ATLAS_GapFill_V2_2.README" - -LICENSE="ATLAS" -SLOT="0" -KEYWORDS="" -IUSE="" - -# is there an ebuild for newbler so we could add it to DEPEND? -RDEPEND=" - dev-lang/perl - sci-biology/phrap - sci-biology/bwa - sci-biology/velvet" -DEPEND="" diff --git a/sci-biology/Atlas_GapFill/Manifest b/sci-biology/Atlas_GapFill/Manifest deleted file mode 100644 index 479998ee1..000000000 --- a/sci-biology/Atlas_GapFill/Manifest +++ /dev/null @@ -1,2 +0,0 @@ -DIST ATLAS_GapFill_V2.2_release.tar.bz2 467649030 BLAKE2B 5d6f5942aeb031c4b546a84be8e60bd4e73cf01e5d4f9725ac4d63e31dca9e8cf4778dfcb06c5290c662e6656634c1dbe8a6c727091fcdb26eb0886e80b6faa8 SHA512 7194cdc085d7a6157de91c3e7ea8968132c107917ae5a46abc05f53d6a8351ef310713108710cba1dc242646117b90a2bde18a99bc9cd08b6d265c8b8892dafd -DIST ATLAS_GapFill_V2_2.README 19029 BLAKE2B 38aa8b2fc3a9d01afe4a05a4dee2537d4554b13e7d7dd8d5468a58c5e64620d3d13afc22c8205d01737cd74d67f9e44e3eb1deb4fc4e8822e3a82598763a53d6 SHA512 fa3408884da4218890074c446317f6e163d657a450c941cb34c59f41f746586a20b11c4142a79fd963986d3e984f7e751d52bb285fa3a520fbe4c28ee84e8404 diff --git a/sci-biology/Atlas_GapFill/metadata.xml b/sci-biology/Atlas_GapFill/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/Atlas_GapFill/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata> |