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authorDavid Seifert <soap@gentoo.org>2017-09-02 14:45:51 +0200
committerDavid Seifert <soap@gentoo.org>2017-09-02 14:45:51 +0200
commit4ef945d1cfc4da74891e2cecdf403f6852cc4ddf (patch)
tree34f6f3fb90df931c52165115b50a11e32cb947dc
parentsci-biology/samtools: Remove old (diff)
downloadsci-4ef945d1.tar.gz
sci-4ef945d1.tar.bz2
sci-4ef945d1.zip
sci-libs/htslib: Remove old
-rw-r--r--sci-libs/htslib/Manifest3
-rw-r--r--sci-libs/htslib/htslib-1.3.2.ebuild27
-rw-r--r--sci-libs/htslib/htslib-1.4.ebuild31
-rw-r--r--sci-libs/htslib/htslib-1.5.ebuild31
-rw-r--r--sci-libs/htslib/metadata.xml11
5 files changed, 0 insertions, 103 deletions
diff --git a/sci-libs/htslib/Manifest b/sci-libs/htslib/Manifest
deleted file mode 100644
index 02c3a926f..000000000
--- a/sci-libs/htslib/Manifest
+++ /dev/null
@@ -1,3 +0,0 @@
-DIST htslib-1.3.2.tar.bz2 983243 SHA256 b9b19e6164769449adf8d050f8976f6265dc844f17a11ff2dca5e821385d0347 SHA512 99ec17b883337e203545a04eac8e22aae2a8eb75063b6a372925359d6f1bafb4a103c31cfb1fdd4b1df85c4b98f7850b36fa15074b91233e6b456897e3fcf002 WHIRLPOOL cfb38b708cba846e71605ef18c5f7af1b7585b1898f41b1cd92c1dc48845cdb172ac982f46c4d25014c8e50cf3aa21e28b375cef48f08ffa683b7b4727ac0a4e
-DIST htslib-1.4.tar.bz2 1050835 SHA256 5cfc8818ff45cd6e924c32fec2489cb28853af8867a7ee8e755c4187f5883350 SHA512 b8dbc29b4f669f8d4a58a17446ba62d5b374d3e33abb6c1aca405a546cd1f6bf278991e45e8eaf3e9af14c3820ee2bd014933cb09e4432142f81be51d2e57d78 WHIRLPOOL e878ffd7cfd2ef1b3edcfb386ae01b5ba6744d7ed40062e7c8971e3b1cdaa44dd6b9daffa94f86115e543a155fcad966792966cff1b335cf6dcdd51587e17260
-DIST htslib-1.5.tar.bz2 1051132 SHA256 a02b515ea51d86352b089c63d778fb5e8b9d784937cf157e587189cb97ad922d SHA512 fd58552ddbd178f9797123fdaf47914ccd0e2aefd055fc6557ac8f479c600775616107cfa871c3acd93079f45974a19f443941a79f2acfd2a8c2983ef35b8917 WHIRLPOOL fb7026c26816db6746006d1b5ade235ce10181a633c9bab8ed3d9f72aaa152d0b68fd69d8988d69fef2bd2d57f9676de0761b2577ef0dd1d334da5d028cb64ee
diff --git a/sci-libs/htslib/htslib-1.3.2.ebuild b/sci-libs/htslib/htslib-1.3.2.ebuild
deleted file mode 100644
index 5e27a462b..000000000
--- a/sci-libs/htslib/htslib-1.3.2.ebuild
+++ /dev/null
@@ -1,27 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="C library for HTS data with bgzip, tabix and htsfile binaries"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="1.4" # libhts.so.1.4
-LICENSE="MIT"
-KEYWORDS=""
-IUSE="static-libs"
-
-DEPEND="
- dev-libs/openssl:=
- app-arch/xz-utils
- app-arch/bzip2
- net-misc/curl"
-RDEPEND="${DEPEND}"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}
diff --git a/sci-libs/htslib/htslib-1.4.ebuild b/sci-libs/htslib/htslib-1.4.ebuild
deleted file mode 100644
index 1e1274ff0..000000000
--- a/sci-libs/htslib/htslib-1.4.ebuild
+++ /dev/null
@@ -1,31 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="C library for HTS data with bgzip, tabix and htsfile binaries"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="2" # libhts.so.2
-LICENSE="MIT"
-KEYWORDS=""
-IUSE="static-libs"
-
-DEPEND="
- dev-libs/openssl:=
- app-arch/xz-utils
- app-arch/bzip2
- net-misc/curl"
-RDEPEND="${DEPEND}"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}
-
-pkg_postinst(){
- einfo "You may want to install sci-libs/htslib-plugins"
-}
diff --git a/sci-libs/htslib/htslib-1.5.ebuild b/sci-libs/htslib/htslib-1.5.ebuild
deleted file mode 100644
index 1e1274ff0..000000000
--- a/sci-libs/htslib/htslib-1.5.ebuild
+++ /dev/null
@@ -1,31 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="C library for HTS data with bgzip, tabix and htsfile binaries"
-HOMEPAGE="http://www.htslib.org/"
-SRC_URI="mirror://sourceforge/samtools/${PV}/${P}.tar.bz2"
-
-SLOT="2" # libhts.so.2
-LICENSE="MIT"
-KEYWORDS=""
-IUSE="static-libs"
-
-DEPEND="
- dev-libs/openssl:=
- app-arch/xz-utils
- app-arch/bzip2
- net-misc/curl"
-RDEPEND="${DEPEND}"
-
-src_install() {
- default
- if ! use static-libs; then
- find "${ED}" -type f -name "*.a" -delete || die
- fi
-}
-
-pkg_postinst(){
- einfo "You may want to install sci-libs/htslib-plugins"
-}
diff --git a/sci-libs/htslib/metadata.xml b/sci-libs/htslib/metadata.xml
deleted file mode 100644
index 49735ee17..000000000
--- a/sci-libs/htslib/metadata.xml
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version='1.0' encoding='UTF-8'?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">samtools</remote-id>
- </upstream>
-</pkgmetadata>