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authorMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2016-07-01 14:32:51 +0200
committerMartin Mokrejš <mmokrejs@fold.natur.cuni.cz>2016-07-01 14:32:51 +0200
commit65cbf3d51c23c49ac206a0b38f0f94b0a2546d56 (patch)
tree981268e461b42c2485cd24b3c3c0d71ec7899acc
parentsci-biology/fsa: version bump (diff)
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sci-biology/fsa: fix license, document optional packages, add DEPEND on java-config
Package-Manager: portage-2.2.28
-rw-r--r--sci-biology/fsa/fsa-1.15.9.ebuild18
1 files changed, 16 insertions, 2 deletions
diff --git a/sci-biology/fsa/fsa-1.15.9.ebuild b/sci-biology/fsa/fsa-1.15.9.ebuild
index 879a1c0e7..d37d56bdc 100644
--- a/sci-biology/fsa/fsa-1.15.9.ebuild
+++ b/sci-biology/fsa/fsa-1.15.9.ebuild
@@ -10,10 +10,24 @@ DESCRIPTION="Distance-based probabilistic multiple sequence alignment algo for D
HOMEPAGE="http://fsa.sourceforge.net"
SRC_URI="http://downloads.sourceforge.net/project/fsa/"${P}".tar.gz"
-LICENSE="GPL-2"
+LICENSE="GPL-3+"
SLOT="0"
KEYWORDS=""
IUSE=""
-DEPEND=""
+DEPEND="dev-java/java-config"
RDEPEND="${DEPEND}"
+
+# needs java for fsa-1.15.9/display/ processing:
+# jar cmf mad/manifest.mf mad.jar \
+# -C . mad \
+# -C . JMF-2.1.1e/lib/jmf.jar \
+# -C . jai-1_1_3/lib/jai_core.jar \
+# -C . jai-1_1_3/lib/jai_codec.jar
+# * Home for VM '' does not exist:
+# * Invalid System VM:
+
+pkg_postinst(){
+ einfo "Optionally you may want to install sci-biology/mummer and"
+ einfo "sci-biology/exonerate"
+}