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| author |   Kacper Kowalik (Xarthisius) <xarthisius@gentoo.org> | 2010-11-08 20:19:03 +0100 |
|---|---|---|
| committer | Kacper Kowalik (Xarthisius) <xarthisius@gentoo.org> | 2010-11-08 20:19:03 +0100 |
| commit | 9045e2bb9ba886b5f50e304c68068da68d9b450d (patch) | |
| tree | 916e9c237174d4e4c2d0afc0e289d1941e63b422 | |
| parent | [sci-biology/miranda] Version bump wrt bug 144316. Thanks to Joel Berendzen <... (diff) | |
| download | sci-9045e2bb9ba886b5f50e304c68068da68d9b450d.tar.gz sci-9045e2bb9ba886b5f50e304c68068da68d9b450d.tar.bz2 sci-9045e2bb9ba886b5f50e304c68068da68d9b450d.zip | |
[sci-biology/codonw] Respect CC,CFLAGS,LDFLAGS. Add missing die. Drop empty deps.
| -rw-r--r-- | sci-biology/codonw/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/codonw/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/codonw/codonw-1.4.4-r1.ebuild (renamed from sci-biology/codonw/codonw-1.4.4.ebuild) | 23 |
3 files changed, 25 insertions, 10 deletions
diff --git a/sci-biology/codonw/ChangeLog b/sci-biology/codonw/ChangeLog index b11af4ff1..d2f9cc3d5 100644 --- a/sci-biology/codonw/ChangeLog +++ b/sci-biology/codonw/ChangeLog @@ -1,7 +1,13 @@ # ChangeLog for sci-biology/codonw -# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*codonw-1.4.4-r1 (08 Nov 2010) + + 08 Nov 2010; Kacper Kowalik <xarthisius@gentoo.org> -codonw-1.4.4.ebuild, + +codonw-1.4.4-r1.ebuild: + Respect CC,CFLAGS,LDFLAGS. Add missing die. Drop empty deps. + 28 Feb 2009; Andrey Kislyuk <weaver@gentoo.org> ChangeLog: New package sci-biology/codonw, ebuild written by me diff --git a/sci-biology/codonw/Manifest b/sci-biology/codonw/Manifest index 4924efc85..eb2e90af1 100644 --- a/sci-biology/codonw/Manifest +++ b/sci-biology/codonw/Manifest @@ -1,4 +1,4 @@ DIST CodonWSourceCode_1_4_4.tar.gz 161908 RMD160 9e01d48525e5308e8719f89276a12a3909d64a09 SHA1 a440d1ebdca328ed1f5efa7342267b7a2e764b3b SHA256 951e2a686f7849e0fa225b83b09842d4cf822ecafd67bff0438fc815512183b8 -EBUILD codonw-1.4.4.ebuild 713 RMD160 4c68f32ec52b06fe8774801985c76799a535ce2d SHA1 19d75ea2e99d0d2bb19917d8b222cd3bafc1750f SHA256 fef97a11b103a56bbe1cf7d738b7ed5eec88ca41534bdb669786775a0822f400 -MISC ChangeLog 236 RMD160 e05eb4cb038a7cc7ba408e6a7d23a094b952e3a0 SHA1 39770d437935a6e460b940543437232338dadaeb SHA256 c71c2b83bae5a2a90a407a223014ea047dd802c0243603c5c7f3d3c5fad8d3dc +EBUILD codonw-1.4.4-r1.ebuild 928 RMD160 06354dac3504df4e4feccf6cf6261a0c1c8a6dfa SHA1 acd84fdeef62f055a8cdf6a033edfe7f883d8f10 SHA256 c99157862f6ee0a30e0c62888ac9d9d5977eee9e12cdd4fd650801eac9824e38 +MISC ChangeLog 435 RMD160 be5677fe4fe3cce0464834389b5c02e1dfb06ff5 SHA1 6318f550aa8e0f901ac5f3b57a52e2f404aeba0b SHA256 9d4201e4ff6acccc66c516e3a970b415a4820f167010fa8fd3dc11c5217847ce MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110 diff --git a/sci-biology/codonw/codonw-1.4.4.ebuild b/sci-biology/codonw/codonw-1.4.4-r1.ebuild index 6e28883af..3563ddfab 100644 --- a/sci-biology/codonw/codonw-1.4.4.ebuild +++ b/sci-biology/codonw/codonw-1.4.4-r1.ebuild @@ -1,13 +1,15 @@ -# Copyright 1999-2009 Gentoo Foundation +# Copyright 1999-2010 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: $ -inherit versionator +EAPI=2 + +inherit versionator toolchain-funcs MY_PV=$(replace_all_version_separators '_') DESCRIPTION="Multivariate statistical analysis of codon and amino acid usage" -HOMEPAGE="http://${PN}.sourceforge.net/" +HOMEPAGE="http://codonw.sourceforge.net/" SRC_URI="mirror://sourceforge/${PN}/CodonWSourceCode_${MY_PV}.tar.gz" LICENSE="GPL-2" @@ -15,10 +17,17 @@ SLOT="0" IUSE="" KEYWORDS="~amd64 ~x86" -DEPEND="" -RDEPEND="" +S=${WORKDIR}/codonW + +src_prepare() { + sed -e 's/$(CC) -c/& -DBSD/' \ + -e 's/$(CFLAGS) $(objects)/$(CFLAGS) $(LDFLAGS) $(objects)/' \ + -i Makefile || die +} -S="${WORKDIR}/codonW" +src_compile() { + emake CC="$(tc-getCC)" CFLAGS="${CFLAGS}" || die +} src_install() { dobin codonw || die @@ -26,5 +35,5 @@ src_install() { for i in rscu cu aau raau tidy reader cutab cutot transl bases base3s dinuc cai fop gc3s gc cbi enc; do dosym codonw /usr/bin/${i} || die done - dodoc *.txt + dodoc *.txt || die } |