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authorHorea Christian <chr@chymera.eu>2021-10-29 07:58:58 -0400
committerHorea Christian <chr@chymera.eu>2021-10-29 07:58:58 -0400
commita67a1c84befd9b4a6653b197d1f5686e223b7cbb (patch)
tree90f15372606a554b10090283cca7dcc5de2dffa5
parentdev-java/freehep-graphicsio-emf: last-rites from ::gentoo, EAPI bump (diff)
downloadsci-a67a1c84.tar.gz
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sci-a67a1c84.zip
dev-python/hdmf: new package (DANDI stack)
Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Horea Christian <chr@chymera.eu>
-rw-r--r--dev-python/hdmf/Manifest1
-rw-r--r--dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch10
-rw-r--r--dev-python/hdmf/hdmf-3.1.1.ebuild32
-rw-r--r--dev-python/hdmf/metadata.xml18
4 files changed, 61 insertions, 0 deletions
diff --git a/dev-python/hdmf/Manifest b/dev-python/hdmf/Manifest
new file mode 100644
index 000000000..67e1f4b6c
--- /dev/null
+++ b/dev-python/hdmf/Manifest
@@ -0,0 +1 @@
+DIST hdmf-3.1.1.tar.gz 292419 BLAKE2B eed1b1c282f022f7e1bd3af63c3078563a74895bf177244841ee0cabd3ab391e2d7a48c9a111a909f5982bf1a1c9b44f1b82fd710f9729681bcada396d3c3d7b SHA512 41776932b1150126a162e9f87072d6626a28bb3f0e05f75337e4f6529c27005ca9db932fdff0c45bb16cbebf68388c7cbf575bbd17950c29c300702a37afacf0
diff --git a/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch
new file mode 100644
index 000000000..989332bb5
--- /dev/null
+++ b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch
@@ -0,0 +1,10 @@
+--- a/setup.py 2021-09-24 00:51:55.892741725 -0400
++++ b/setup.py 2021-10-27 14:33:20.733741241 -0400
+@@ -23,7 +23,7 @@
+ 'scipy>=1.1,<2',
+ 'pandas>=1.0.5,<2',
+ 'ruamel.yaml>=0.16,<1',
+- 'jsonschema>=2.6.0,<4',
++ 'jsonschema>=2.6.0',
+ 'setuptools',
+ ]
diff --git a/dev-python/hdmf/hdmf-3.1.1.ebuild b/dev-python/hdmf/hdmf-3.1.1.ebuild
new file mode 100644
index 000000000..1731b0d90
--- /dev/null
+++ b/dev-python/hdmf/hdmf-3.1.1.ebuild
@@ -0,0 +1,32 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{8..10} )
+DISTUTILS_USE_SETUPTOOLS=rdepend
+inherit distutils-r1
+
+DESCRIPTION="The Hierarchical Data Modeling Framework"
+HOMEPAGE="https://github.com/hdmf-dev/hdmf"
+SRC_URI="https://github.com/hdmf-dev/hdmf/releases/download/${PV}/${P}.tar.gz"
+
+SLOT="0"
+LICENSE="BSD"
+KEYWORDS="~amd64 ~x86"
+
+RDEPEND="
+ dev-python/h5py[${PYTHON_USEDEP}]
+ dev-python/jsonschema[${PYTHON_USEDEP}]
+ dev-python/numpy[${PYTHON_USEDEP}]
+ dev-python/pandas[${PYTHON_USEDEP}]
+ dev-python/ruamel-yaml[${PYTHON_USEDEP}]
+ dev-python/scipy[${PYTHON_USEDEP}]
+ "
+BDEPEND=""
+
+distutils_enable_tests pytest
+
+PATCHES=(
+ "${FILESDIR}/${PN}-3.1.1-new_jsonschema.patch"
+)
diff --git a/dev-python/hdmf/metadata.xml b/dev-python/hdmf/metadata.xml
new file mode 100644
index 000000000..82da7c426
--- /dev/null
+++ b/dev-python/hdmf/metadata.xml
@@ -0,0 +1,18 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer type="person">
+ <email>gentoo@chymera.eu</email>
+ <name>Horea Christian</name>
+ </maintainer>
+ <maintainer type="project">
+ <email>sci@gentoo.org</email>
+ <name>Gentoo Science Project</name>
+ </maintainer>
+ <longdescription lang="en">
+ The Hierarchical Data Modeling Framework, or HDMF, is a Python package
+ for working with hierarchical data. It provides APIs for specifying
+ data models, reading and writing data to different storage backends,
+ and representing data with Python object.
+ </longdescription>
+</pkgmetadata>