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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-05-03 18:29:07 +0200 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2016-05-03 18:29:07 +0200 |
| commit | ab81c954929bf42695635e178814e48bdf053ba9 (patch) | |
| tree | 461e7410cf45040aa06eb757e19af197cbe5c6a9 | |
| parent | dev-perl/Algorithm-Loops: new package (diff) | |
| download | sci-ab81c954.tar.gz sci-ab81c954.tar.bz2 sci-ab81c954.zip | |
sci-biology/prot4EST: add more DEPS, cleanup
Package-Manager: portage-2.2.28
| -rw-r--r-- | sci-biology/prot4EST/prot4EST-3.1b.ebuild | 17 |
1 files changed, 8 insertions, 9 deletions
diff --git a/sci-biology/prot4EST/prot4EST-3.1b.ebuild b/sci-biology/prot4EST/prot4EST-3.1b.ebuild index d4528a6a4..ea30cf4a9 100644 --- a/sci-biology/prot4EST/prot4EST-3.1b.ebuild +++ b/sci-biology/prot4EST/prot4EST-3.1b.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2014 Gentoo Foundation +# Copyright 1999-2016 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -6,11 +6,11 @@ EAPI=5 inherit perl-module -DESCRIPTION="Predict proteins from EST sequences overcoming errors in ORFs" -HOMEPAGE="http://www.compsysbio.org/lab/?q=prot4EST" +DESCRIPTION="Predict proteins from EST sequences overcoming frameshifts" +HOMEPAGE="http://www.compsysbio.org/lab/?q=prot4EST + http://www.biomedcentral.com/1471-2105/5/187" SRC_URI="http://www.compsysbio.org/lab/james/prot4EST_rl3.1b.tgz" -#http://www.biomedcentral.com/1471-2105/5/187 LICENSE="GPL-1" SLOT="0" KEYWORDS="" @@ -19,19 +19,18 @@ IUSE="" DEPEND="sci-biology/emboss sci-biology/estscan sci-biology/bioperl + sci-biology/ncbi-tools virtual/perl-File-Path virtual/perl-Getopt-Long dev-perl/Statistics-Descriptive - dev-perl/Tie-IxHash" - #dev-perl/Algorithm-Loops - #dev-perl/File-Copy - + dev-perl/Tie-IxHash + dev-perl/Algorithm-Loops" RDEPEND="${DEPEND}" S="${WORKDIR}"/"p4e3.1b" src_install(){ - mydoc="README" + mydoc="README INSTALL" perl-module_src_install mv bin/prot4EST*.pl bin/prot4EST.pl dobin bin/*.pl |