sci-biology/argo-bin: ebuild cleanup; version bump

Package-Manager: portage-2.2.18

4 files changed, 46 insertions, 5 deletions

diff --git a/sci-biology/argo-bin/ChangeLog b/sci-biology/argo-bin/ChangeLog
index d8c050f16..01ad4963e 100644
--- a/sci-biology/argo-bin/ChangeLog
+++ b/sci-biology/argo-bin/ChangeLog
@@ -2,6 +2,12 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*argo-bin-2.0.3 (26 May 2015)
+
+  26 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
+  +argo-bin-2.0.3.ebuild, argo-bin-1.0.31.ebuild:
+  sci-biology/argo-bin: ebuild cleanup; version bump
+
   25 May 2015; Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
   argo-bin-1.0.31.ebuild:
   sci-biology/argo-bin: redefine S variable so we can chdir to a WORKDIR (not
diff --git a/sci-biology/argo-bin/Manifest b/sci-biology/argo-bin/Manifest
index bf9a7aa39..73550affb 100644
--- a/sci-biology/argo-bin/Manifest
+++ b/sci-biology/argo-bin/Manifest
@@ -1 +1,2 @@
 DIST argo.jar 26624770 SHA256 33ece2dba7ee5cc36f5aab99b3e7df2d641b261d86aacac00745e9d4a2e914cf SHA512 fc1aaa39453502054d402386d3551014d71a81a73593420fe5073a462b3f605e00e8b32e21e54a4f669a3f09a25e8946db17928c65c17beea26ec4316e91458d WHIRLPOOL a1a83d721f4273cee97ac04e9935c5254adf84f9187c5a7330339f71cad826cab3eb375105ba454835d5803de5d476615b6c497fb47af37536a1211d48a6b09e
+DIST argo2.jar 27685069 SHA256 7ebcb16d7dcf85d1a7c8ef427f78a4cb6a48b9ff2a1814b6d4931cf4f9218002 SHA512 8a03cfe6016ffa2d661dbf04ce9fde6e5474fcf111336399c934c481a4c71758b3007a20f3af931725c9e2f5f2bf3bc0c1d131cdda6e57992c10a6c0854207a8 WHIRLPOOL c89249b732c6450eb69170f0d00950a854a613eba10aee53290f1bf50ac1888bcbd7a2902788e824125702e2002e80015d0b21fcbd89bd0593688c4878d981e4
diff --git a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
index 6db9160b2..db8efaf19 100644
--- a/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
+++ b/sci-biology/argo-bin/argo-bin-1.0.31.ebuild
@@ -2,23 +2,26 @@
 # Distributed under the terms of the GNU General Public License v2
 # $Header: $
 
-EAPI=4
+EAPI=5
 
 inherit java-utils-2 toolchain-funcs
 
 DESCRIPTION="Visualization and manually annotating whole genomes"
-HOMEPAGE="http://www.broadinstitute.org/annotation/argo/"
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+	http://www.broadinstitute.org/annotation/argo"
 SRC_URI="http://www.broadinstitute.org/annotation/argo/argo.jar"
-#SRC_URI="http://www.broadinstitute.org/annotation/argo/src/workspace-2008-03-11.tgz"
+#
+# Release Number: 1.0.31
+# Release Date:   2010-02-05
 
 LICENSE="LGPL-3"
 SLOT="0"
 KEYWORDS="~amd64 ~x86"
 IUSE="java"
 
-DEPEND=""
+DEPEND="!sci-biology/argo"
 RDEPEND="${DEPEND}
-		java? ( >=virtual/jre-1.4 )"
+		java? ( >=virtual/jre-1.5:* )"
 
 S="${WORKDIR}"
 
diff --git a/sci-biology/argo-bin/argo-bin-2.0.3.ebuild b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
new file mode 100644
index 000000000..5659a9783
--- /dev/null
+++ b/sci-biology/argo-bin/argo-bin-2.0.3.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+inherit java-utils-2 toolchain-funcs
+
+DESCRIPTION="Visualization and manually annotating whole genomes"
+HOMEPAGE="http://www.broadinstitute.org/annotation/argo2
+	http://www.broadinstitute.org/annotation/argo"
+SRC_URI="http://www.broadinstitute.org/annotation/argo2/releases/argo2.jar"
+#
+# Release Number: 3
+# Release Date:   2010-06-23
+
+LICENSE="LGPL-3"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="java"
+
+DEPEND="!sci-biology/argo"
+RDEPEND="${DEPEND}
+		java? ( >=virtual/jre-1.5:* )"
+
+S="${WORKDIR}"
+
+src_install() {
+	java-pkg_newjar "${DISTDIR}"/argo2.jar argo2.jar
+	java-pkg_dolauncher
+}