diff options
| author |   Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-01-19 15:37:19 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-01-19 15:37:19 +0100 |
| commit | e263da94af529b631abf24bf5d89fa507eb8dc1f (patch) | |
| tree | be2c8eba2e0abaa0593bd933dfb6248b3f83057b | |
| parent | sci-biology/cnrun: fix fetch, EAPI bump (diff) | |
| download | sci-e263da94af529b631abf24bf5d89fa507eb8dc1f.tar.gz sci-e263da94af529b631abf24bf5d89fa507eb8dc1f.tar.bz2 sci-e263da94af529b631abf24bf5d89fa507eb8dc1f.zip | |
sci-biology/clover: remove pack, upstream gone
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
| -rw-r--r-- | profiles/package.mask | 1 | ||||
| -rw-r--r-- | sci-biology/clover/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/clover/clover-2011.10.24.ebuild | 39 | ||||
| -rw-r--r-- | sci-biology/clover/metadata.xml | 11 |
4 files changed, 0 insertions, 53 deletions
diff --git a/profiles/package.mask b/profiles/package.mask index 7910c5ff9..ff4b8f568 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -47,4 +47,3 @@ sci-biology/blue sci-biology/cd-hit-auxtools sci-biology/cegma sci-biology/cgview-bin -sci-biology/clover diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest deleted file mode 100644 index 5134912e0..000000000 --- a/sci-biology/clover/Manifest +++ /dev/null @@ -1,2 +0,0 @@ -DIST clover-2011-10-24.tar.gz 15843 BLAKE2B 954817e40b49f63d7e3c1c98a82bcc5c56fb695e9428c16244f8c6f82f41cdf80584b933f01f6aec5b08bcfe8a15f193e63af90b9ac16071d57e7bbbbb4cffc5 SHA512 edf773943a33d58b07b7a47ca9e6c0fe08715d7f445ef1283848a14eb72d084b2113a911f23bc484b3229ec14b8eeb50d460c6b9fef89db2fa031ea059b36b93 -DIST jaspar2009core 54400 BLAKE2B 0260a968b212499ec287821dadc74bff908d4918668025639aa6528b6eb29b4a499762b25ed544ffab2938cbdcea645af23d7f50c8143ac6aa3dfa11388d25aa SHA512 621eac23fb0db78391d3d51471f03eccc791e1b348b23b5d9dae32b082c8301e847ee1eea4a76ac188796b639125a0970e5f0b3c0d3c673ae6f6634856c980a0 diff --git a/sci-biology/clover/clover-2011.10.24.ebuild b/sci-biology/clover/clover-2011.10.24.ebuild deleted file mode 100644 index b8d395801..000000000 --- a/sci-biology/clover/clover-2011.10.24.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2014 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit toolchain-funcs versionator - -MY_PV=$(replace_all_version_separators '-') - -DESCRIPTION="Cis-eLement OVERrepresentation: Detection of functional DNA motifs" -HOMEPAGE="http://zlab.bu.edu/clover/" -SRC_URI=" - http://zlab.bu.edu/~mfrith/downloads/${PN}-${MY_PV}.tar.gz - http://zlab.bu.edu/clover/jaspar2009core" - -LICENSE="freedist" -SLOT="0" -IUSE="" -KEYWORDS="~amd64 ~x86" - -S="${WORKDIR}/${PN}-${MY_PV}" - -src_prepare() { - sed \ - -e "s:g++:$(tc-getCXX) \$(LDFLAGS):; s:-Wall -O3:${CFLAGS}:" \ - -i Makefile || die "sed failed" -} - -src_install() { - dobin clover - insinto /usr/share/${PN} - doins "${DISTDIR}/jaspar2009core" -} - -pkg_postinst() { - einfo "The motif library jaspar2009core has been installed in" - einfo " /usr/share/clover/jaspar2009core" - einfo "You can pass this library to clover for motif search, or use your own library." -} diff --git a/sci-biology/clover/metadata.xml b/sci-biology/clover/metadata.xml deleted file mode 100644 index 770d40f6d..000000000 --- a/sci-biology/clover/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>maintainer-wanted@gentoo.org</email> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata> |