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authorMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2019-12-29 12:39:28 +0100
committerMartin Mokrejs <mmokrejs@fold.natur.cuni.cz>2019-12-29 12:39:28 +0100
commitf54702e57e98ae5f4bf7f867f40dd3ea29157f19 (patch)
tree487530e15060e48ef7bea494f717556ac8621581
parentsci-biology/bowtie: version bump (diff)
downloadsci-f54702e5.tar.gz
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sci-f54702e5.zip
sci-biology/pybedtools: upgrade from 0.6.9 to 0.8.0
0.6.9 was not fully python3 ready, due to https://stackoverflow.com/questions/40367569/dictionary-not-writable-generic-old-setup-py at least Package-Manager: Portage-2.3.75, Repoman-2.3.17 Signed-off-by: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
-rw-r--r--sci-biology/pybedtools/Manifest2
-rw-r--r--sci-biology/pybedtools/pybedtools-0.8.0.ebuild (renamed from sci-biology/pybedtools/pybedtools-0.6.9.ebuild)8
2 files changed, 5 insertions, 5 deletions
diff --git a/sci-biology/pybedtools/Manifest b/sci-biology/pybedtools/Manifest
index 60c219413..9fa366e93 100644
--- a/sci-biology/pybedtools/Manifest
+++ b/sci-biology/pybedtools/Manifest
@@ -1 +1 @@
-DIST pybedtools-0.6.9.tar.gz 18738115 BLAKE2B 81f9057129d65b92106b254b9ae6c74d59e359a28847af45e26d25090d8787003038cc93db552d6b9ce4c9588efd48f2d0b7155591f6f305222cbfff7154cadc SHA512 64d54145899db947499b706310941980c75b515cb8d88f67708153b625d782e62021826b9615dd4fe225f4435d9c9d4aa8583538109308625f703883599aeb79
+DIST pybedtools-0.8.0.tar.gz 12445206 BLAKE2B 036bdd39681634a0292dd527da5db3b19d2df6fbfb006b3d90daeca2d0ffa58553b3a2fb921c67bfa49eacf3f1c9687123274c7642497b5959075fa5b6133b46 SHA512 1ee83c2b9ee1f5cf7f087e54d630f580d09505ab78d94e3b17a9e031f66564408193d33e1f4ac5f3777539182f4a12968ecc4b3c6f1bb350dd19f38a62acee42
diff --git a/sci-biology/pybedtools/pybedtools-0.6.9.ebuild b/sci-biology/pybedtools/pybedtools-0.8.0.ebuild
index f0d497802..d817a594f 100644
--- a/sci-biology/pybedtools/pybedtools-0.6.9.ebuild
+++ b/sci-biology/pybedtools/pybedtools-0.8.0.ebuild
@@ -1,13 +1,13 @@
-# Copyright 1999-2015 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
-PYTHON_COMPAT=( python2_7 )
+PYTHON_COMPAT=( python2_7 python3_{5,6,7,8} )
inherit distutils-r1
-DESCRIPTION="Wrapper for Aaron Quinlan's BEDtools, plus other useful methods for working"
+DESCRIPTION="Use BED and GFF files from python using BEDtools"
HOMEPAGE="http://pythonhosted.org/pybedtools/"
SRC_URI="https://github.com/daler/pybedtools/archive/v${PV}.tar.gz -> ${P}.tar.gz"