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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2014-03-24 02:41:35 +0100 |
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| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2014-03-24 02:41:35 +0100 |
| commit | 5c73aaa78d02e3b384be3b52120625ed8b507e19 (patch) | |
| tree | cc69d8177fd0ef91cbad832dbe607c6ce76cbda1 /sci-biology/freebayes/freebayes-9999.ebuild | |
| parent | sci-biology/pileup: dropped KEYWORDS due to misisng LICENSE (diff) | |
| download | sci-5c73aaa78d02e3b384be3b52120625ed8b507e19.tar.gz sci-5c73aaa78d02e3b384be3b52120625ed8b507e19.tar.bz2 sci-5c73aaa78d02e3b384be3b52120625ed8b507e19.zip | |
sci-biology/freebayes: a new package skeleton; need to retrive from git in a recursive way
Diffstat (limited to 'sci-biology/freebayes/freebayes-9999.ebuild')
| -rw-r--r-- | sci-biology/freebayes/freebayes-9999.ebuild | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/sci-biology/freebayes/freebayes-9999.ebuild b/sci-biology/freebayes/freebayes-9999.ebuild new file mode 100644 index 000000000..0876efbb2 --- /dev/null +++ b/sci-biology/freebayes/freebayes-9999.ebuild @@ -0,0 +1,30 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit eutils + +[ "$PV" == "9999" ] && inherit git-2 + +DESCRIPTION="Bayesian genetic variant detector designed to find small polymorphisms: SNPs, indels, MNPs and complex events" +HOMEPAGE="https://github.com/ekg/freebayes" +EGIT_REPO_URI="git://github.com/ekg/freebayes.git" + +# need top checkout vcflib/ as well +# +# To build freebayes you must use git to also download its submodules. +# Do so by downloading freebayes again using this command (note --recursive flag): +# git clone --recursive git://github.com/ekg/freebayes.git +# + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND} + sci-biology/bamtools + sci-biology/samtools" |