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| author |   Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-02-16 10:53:34 +0100 |
|---|---|---|
| committer | Martin Mokrejš <mmokrejs@fold.natur.cuni.cz> | 2017-02-16 10:53:34 +0100 |
| commit | 5f3f4d9525b701b6643ecbdfa3835051201c6e25 (patch) | |
| tree | 8c47df4165f4995438aba4952b6a3d29b50ac6a3 /sci-biology/freebayes/freebayes-9999.ebuild | |
| parent | Drop quoting form EAPI (diff) | |
| download | sci-5f3f4d9525b701b6643ecbdfa3835051201c6e25.tar.gz sci-5f3f4d9525b701b6643ecbdfa3835051201c6e25.tar.bz2 sci-5f3f4d9525b701b6643ecbdfa3835051201c6e25.zip | |
sci-biology/freebayes: force compilation in a single thread as parallel build fails
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology/freebayes/freebayes-9999.ebuild')
| -rw-r--r-- | sci-biology/freebayes/freebayes-9999.ebuild | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/sci-biology/freebayes/freebayes-9999.ebuild b/sci-biology/freebayes/freebayes-9999.ebuild index b4eee4419..1b1eb89ed 100644 --- a/sci-biology/freebayes/freebayes-9999.ebuild +++ b/sci-biology/freebayes/freebayes-9999.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2016 Gentoo Foundation +# Copyright 1999-2017 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ @@ -84,6 +84,10 @@ RDEPEND="${DEPEND} # g++ -O3 -D_FILE_OFFSET_BITS=64 -g -I../ttmath -I../bamtools/src/ -I../vcflib/src/ -I../vcflib/tabixpp/ -I../vcflib/smithwaterman/ -I../vcflib/multichoose/ -I../vcflib/filevercmp/ -I../vcflib/tabixpp/htslib -I../SeqLib -I../SeqLib/htslib -c freebayes.cpp +src_compile(){ + emake -j1 # vcflib/smithwaterman/ sometimes does not compile +} + src_install(){ dobin bin/freebayes bin/bamleftalign } |