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# Copyright 1999-2016 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=6
PYTHON_COMPAT=( python{2_7,3_4,3_5} ) # https://github.com/Ensembl/Bio-DB-HTS/issues/30
inherit python-r1 eutils flag-o-matic
DESCRIPTION="K-mer Analysis Toolkit (histogram, filter, compare sets, plot)"
HOMEPAGE="https://github.com/TGAC/KAT"
SRC_URI="https://github.com/TGAC/KAT/releases/download/Release-${PV}/${P}.tar.gz"
LICENSE="GPL-3+"
SLOT="0"
KEYWORDS=""
IUSE="cpu_flags_x86_sse"
DEPEND="dev-libs/boost:0
dev-python/matplotlib
sci-visualization/gnuplot"
RDEPEND="${DEPEND}"
# contains bundled modified version of jellyfish-2.2 which should install under different filenames
src_configure(){
local myconf=()
myconf+=( --disable-gnuplot ) # python3 does better image rendering, no need for gnuplot
use cpu_flags_x86_sse && myconf+=( $(use_with cpu_flags_x86_sse sse) ) # pass down to jellyfish-2.20/configure
PYTHON_VERSION=3 econf ${myconf[@]}
eapply_user
}
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