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| author |   azazello <gentoo@horizon.ath.cx> | 2006-09-25 00:13:38 +0000 |
|---|---|---|
| committer | azazello <gentoo@horizon.ath.cx> | 2006-09-25 00:13:38 +0000 |
| commit | 2ae2745239c716ce5c33d96cb20c894ce02c080d (patch) | |
| tree | e7fcbc49a3d6d6b6020ab0678dd96e674eb998e0 /sci-biology | |
| parent | net-misc/aria2: Version bump with some cleanups. Old versions removed. (diff) | |
| download | sunrise-2ae2745239c716ce5c33d96cb20c894ce02c080d.tar.gz sunrise-2ae2745239c716ce5c33d96cb20c894ce02c080d.tar.bz2 sunrise-2ae2745239c716ce5c33d96cb20c894ce02c080d.zip | |
sci-biology/blat: new ebuild: sci-biology/blat-33 (bug 135307)
svn path=/sunrise/; revision=1330
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/blat/ChangeLog | 12 | ||||
| -rw-r--r-- | sci-biology/blat/Manifest | 16 | ||||
| -rw-r--r-- | sci-biology/blat/blat-33.ebuild | 31 | ||||
| -rw-r--r-- | sci-biology/blat/files/digest-blat-33 | 3 | ||||
| -rw-r--r-- | sci-biology/blat/metadata.xml | 5 |
5 files changed, 67 insertions, 0 deletions
diff --git a/sci-biology/blat/ChangeLog b/sci-biology/blat/ChangeLog new file mode 100644 index 000000000..266395377 --- /dev/null +++ b/sci-biology/blat/ChangeLog @@ -0,0 +1,12 @@ +# ChangeLog for sci-biology/blat +# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + + 25 Sep 2006; Andrei K. (azazello) <az@horizon.ath.cx> +blat-33.ebuild, + +metadata.xml: + new ebuild: sci-biology/blat-33 (bug 135307) + + 25 Sep 2006; Andrei K. (azazello) <az@horizon.ath.cx> +blat-33.ebuild, + +metadata.xml: + new ebuild: sci-biology/blat-33 (bug 135307) + diff --git a/sci-biology/blat/Manifest b/sci-biology/blat/Manifest new file mode 100644 index 000000000..5b1931af9 --- /dev/null +++ b/sci-biology/blat/Manifest @@ -0,0 +1,16 @@ +DIST blatSrc33.zip 1308517 RMD160 76d7f8f713a5ece72c63eb8852662acf83e2e736 SHA1 a9606455549e2f153ab04321d08e59f60c039dd2 SHA256 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29 +EBUILD blat-33.ebuild 791 RMD160 8d05f7c7d4d5c5b22173b788f1eef8c1860b0703 SHA1 f52683d52b02b75fd1b272b9da993b543c94e612 SHA256 720895fb5448757690ad8a1575daf73acaa75c8a78ee40fda4b9320e7183b7d7 +MD5 17c4eb0e52d3cd91a06bc52e014d9b48 blat-33.ebuild 791 +RMD160 8d05f7c7d4d5c5b22173b788f1eef8c1860b0703 blat-33.ebuild 791 +SHA256 720895fb5448757690ad8a1575daf73acaa75c8a78ee40fda4b9320e7183b7d7 blat-33.ebuild 791 +MISC ChangeLog 393 RMD160 f9b911e5125a41753887f25a27b9b6bd80dec5a8 SHA1 03b061a640802d15497e44e5db15fdfe6d774c0d SHA256 77988784279dc3f7b7362ac9d0037c99bec86c4e5e7e77258dad00ee6936d615 +MD5 11fb4b55e32fc16f632425b03fea9bd2 ChangeLog 393 +RMD160 f9b911e5125a41753887f25a27b9b6bd80dec5a8 ChangeLog 393 +SHA256 77988784279dc3f7b7362ac9d0037c99bec86c4e5e7e77258dad00ee6936d615 ChangeLog 393 +MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 +MD5 1e678929a9fec6632e227bdf2262e9a1 metadata.xml 170 +RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 metadata.xml 170 +SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 metadata.xml 170 +MD5 762700fd66583fb30a2036fddc991c09 files/digest-blat-33 223 +RMD160 2a3f5a14978a209ed44542f37026dea617d025f7 files/digest-blat-33 223 +SHA256 37fda0a57d5990b4467a5d0ff43a26e8b7e4a0a7dca3ccfe4d0138cd69618b32 files/digest-blat-33 223 diff --git a/sci-biology/blat/blat-33.ebuild b/sci-biology/blat/blat-33.ebuild new file mode 100644 index 000000000..ce7442af2 --- /dev/null +++ b/sci-biology/blat/blat-33.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2006 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +DESCRIPTION="The BLAST-Like Alignment Tool, a fast genomic sequence aligner" +LICENSE="blat" +HOMEPAGE="http://www.cse.ucsc.edu/~kent/" +SLOT="0" +IUSE="" +KEYWORDS="~x86" + +SRC_URI="http://www.soe.ucsc.edu/~kent/src/${PN}Src${PV}.zip" +S="${WORKDIR}/${PN}Src" + +DEPEND="app-arch/unzip" +RDEPEND="" + +inherit toolchain-funcs + +src_compile() { + MACHTYPE=$(tc-arch) + if [[ $MACHTYPE == "x86" ]]; then MACHTYPE="i386"; fi + sed -i 's/-Werror//; s/CFLAGS=//;' "${S}/inc/common.mk" + mkdir -p "${S}/bin/${MACHTYPE}" + emake MACHTYPE="${MACHTYPE}" HOME="${S}" || die "emake failed" +} + +src_install() { + MACHTYPE="`uname|tr 'A-Z' 'a-z'|sed 's/linux/i386/'`" + dobin "${S}/bin/${MACHTYPE}/"* +} diff --git a/sci-biology/blat/files/digest-blat-33 b/sci-biology/blat/files/digest-blat-33 new file mode 100644 index 000000000..c1fe634d4 --- /dev/null +++ b/sci-biology/blat/files/digest-blat-33 @@ -0,0 +1,3 @@ +MD5 5f9d3a4a88e57dfc435b5dd465209918 blatSrc33.zip 1308517 +RMD160 76d7f8f713a5ece72c63eb8852662acf83e2e736 blatSrc33.zip 1308517 +SHA256 4ca932721f529d815e64b51940c94d8136faec52c6b8bf8c3fcd3706337d9a29 blatSrc33.zip 1308517 diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml new file mode 100644 index 000000000..7e3286984 --- /dev/null +++ b/sci-biology/blat/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> +<herd>maintainer-wanted</herd> +</pkgmetadata> |