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authorSam James <sam@gentoo.org>2021-05-24 22:08:17 +0000
committerSam James <sam@gentoo.org>2021-05-24 22:08:55 +0000
commitca58a4b159282f564f046e035a17f7ce0bd30f01 (patch)
treebcd129b5fc4d6222be283edaf1895697ccbb2f85 /dev-python
parentdev-python/rfc3986-validator: Added ~mips to KEYWORDS (diff)
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dev-python/numpy: add popcnt patch
Closes: https://bugs.gentoo.org/788184 Signed-off-by: Sam James <sam@gentoo.org>
Diffstat (limited to 'dev-python')
-rw-r--r--dev-python/numpy/files/numpy-1.20.2-fix-popcnt-detection.patch103
-rw-r--r--dev-python/numpy/numpy-1.20.2-r1.ebuild (renamed from dev-python/numpy/numpy-1.20.2.ebuild)1
-rw-r--r--dev-python/numpy/numpy-1.20.3.ebuild1
3 files changed, 105 insertions, 0 deletions
diff --git a/dev-python/numpy/files/numpy-1.20.2-fix-popcnt-detection.patch b/dev-python/numpy/files/numpy-1.20.2-fix-popcnt-detection.patch
new file mode 100644
index 000000000000..85f4bb11b768
--- /dev/null
+++ b/dev-python/numpy/files/numpy-1.20.2-fix-popcnt-detection.patch
@@ -0,0 +1,103 @@
+https://github.com/numpy/numpy/pull/19074
+https://bugs.gentoo.org/788184
+
+From 8dc768964b5578a8aa9db1ef2c55134a00731e10 Mon Sep 17 00:00:00 2001
+From: Carl Michal <michal@physics.ubc.ca>
+Date: Sat, 22 May 2021 20:43:10 -0700
+Subject: [PATCH 1/2] Fix compile-time test of POPCNT
+
+The compile-time test of POPCNT, cpu_popcnt.c produced code that would
+execute without error even if the machine didn't support the popcnt
+instruction. This patch attempts to use popcnt on random numbers so the
+compiler can't substitute the answer at compile time.
+---
+ numpy/distutils/checks/cpu_popcnt.c | 14 ++++++++++----
+ 1 file changed, 10 insertions(+), 4 deletions(-)
+
+diff --git a/numpy/distutils/checks/cpu_popcnt.c b/numpy/distutils/checks/cpu_popcnt.c
+index e6a80fb40be4..f6c785dd2a97 100644
+--- a/numpy/distutils/checks/cpu_popcnt.c
++++ b/numpy/distutils/checks/cpu_popcnt.c
+@@ -4,20 +4,26 @@
+ #include <popcntintrin.h>
+ #endif
+
++#include <stdlib.h>
++
+ int main(void)
+ {
+ long long a = 0;
+ int b;
++
++ a = random();
++ b = random();
++
+ #ifdef _MSC_VER
+ #ifdef _M_X64
+- a = _mm_popcnt_u64(1);
++ a = _mm_popcnt_u64(a);
+ #endif
+- b = _mm_popcnt_u32(1);
++ b = _mm_popcnt_u32(b);
+ #else
+ #ifdef __x86_64__
+- a = __builtin_popcountll(1);
++ a = __builtin_popcountll(a);
+ #endif
+- b = __builtin_popcount(1);
++ b = __builtin_popcount(b);
+ #endif
+ return (int)a + b;
+ }
+
+From 52d5fe1ede45083d0783c3e2bbaee5c44df9d553 Mon Sep 17 00:00:00 2001
+From: Carl Michal <michal@physics.ubc.ca>
+Date: Sun, 23 May 2021 08:24:52 -0700
+Subject: [PATCH 2/2] Change fix of cpu_popcnt.c to use
+ _mm_popcnt_u64/_mm_popcnt_u32 on GCC
+
+_builtin_popcount is always available, so the compile-time check always
+succeeds.
+---
+ numpy/distutils/checks/cpu_popcnt.c | 26 ++++++++------------------
+ 1 file changed, 8 insertions(+), 18 deletions(-)
+
+diff --git a/numpy/distutils/checks/cpu_popcnt.c b/numpy/distutils/checks/cpu_popcnt.c
+index f6c785dd2a97..540c98dab05d 100644
+--- a/numpy/distutils/checks/cpu_popcnt.c
++++ b/numpy/distutils/checks/cpu_popcnt.c
+@@ -4,26 +4,16 @@
+ #include <popcntintrin.h>
+ #endif
+
+-#include <stdlib.h>
+-
+-int main(void)
++int main(int argc, char **argv)
+ {
+- long long a = 0;
+- int b;
+-
+- a = random();
+- b = random();
+-
+-#ifdef _MSC_VER
+- #ifdef _M_X64
++ // To make sure popcnt instructions are generated
++ // and been tested against the assembler
++ unsigned long long a = *((unsigned long long*)argv[argc-1]);
++ unsigned int b = *((unsigned int*)argv[argc-2]);
++
++#if defined(_M_X64) || defined(__x86_64__)
+ a = _mm_popcnt_u64(a);
+- #endif
+- b = _mm_popcnt_u32(b);
+-#else
+- #ifdef __x86_64__
+- a = __builtin_popcountll(a);
+- #endif
+- b = __builtin_popcount(b);
+ #endif
++ b = _mm_popcnt_u32(b);
+ return (int)a + b;
+ }
diff --git a/dev-python/numpy/numpy-1.20.2.ebuild b/dev-python/numpy/numpy-1.20.2-r1.ebuild
index 234a0932bb97..2e16936ea190 100644
--- a/dev-python/numpy/numpy-1.20.2.ebuild
+++ b/dev-python/numpy/numpy-1.20.2-r1.ebuild
@@ -48,6 +48,7 @@ BDEPEND="
PATCHES=(
"${FILESDIR}"/numpy-1.20.1-no-hardcode-blasv2.patch
"${FILESDIR}"/numpy-1.20.2-fix-ccompiler-tests.patch
+ "${FILESDIR}"/numpy-1.20.2-fix-popcnt-detection.patch
)
distutils_enable_tests pytest
diff --git a/dev-python/numpy/numpy-1.20.3.ebuild b/dev-python/numpy/numpy-1.20.3.ebuild
index 5b772a58a6f9..6604eb23a4e6 100644
--- a/dev-python/numpy/numpy-1.20.3.ebuild
+++ b/dev-python/numpy/numpy-1.20.3.ebuild
@@ -46,6 +46,7 @@ BDEPEND="
PATCHES=(
"${FILESDIR}"/numpy-1.20.1-no-hardcode-blasv2.patch
"${FILESDIR}"/numpy-1.20.2-fix-ccompiler-tests.patch
+ "${FILESDIR}"/numpy-1.20.2-fix-popcnt-detection.patch
"${FILESDIR}"/numpy-1.20.3-float-hashing-py310.patch
)