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authorDavid Seifert <soap@gentoo.org>2022-07-02 15:16:02 +0200
committerDavid Seifert <soap@gentoo.org>2022-07-02 15:16:02 +0200
commitad5bb34dc60813f76a4e36f79fa95293b8be5442 (patch)
tree68196e86a8a9caa200b6199a6d0d2c086ed7d9d5 /sci-biology/HTSeq
parentsci-biology/HTSeq: sync live ebuild (diff)
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sci-biology/HTSeq: drop 0.12.4
Closes: https://bugs.gentoo.org/809662 Closes: https://bugs.gentoo.org/846221 Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology/HTSeq')
-rw-r--r--sci-biology/HTSeq/HTSeq-0.12.4.ebuild33
-rw-r--r--sci-biology/HTSeq/Manifest1
2 files changed, 0 insertions, 34 deletions
diff --git a/sci-biology/HTSeq/HTSeq-0.12.4.ebuild b/sci-biology/HTSeq/HTSeq-0.12.4.ebuild
deleted file mode 100644
index 548684fd531b..000000000000
--- a/sci-biology/HTSeq/HTSeq-0.12.4.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7..9} )
-
-inherit distutils-r1
-
-DESCRIPTION="Python support for SAM/BAM/Bowtie/FASTA/Q/GFF/GTF files"
-HOMEPAGE="https://htseq.readthedocs.io/"
-
-if [[ ${PV} == *9999 ]]; then
- inherit git-r3
- EGIT_REPO_URI="https://github.com/htseq/htseq.git"
-else
- SRC_URI="https://github.com/htseq/htseq/archive/release_${PV}.tar.gz -> ${P}.tar.gz"
-
- S="${WORKDIR}"/htseq-release_${PV}
- KEYWORDS="~amd64"
-fi
-
-LICENSE="GPL-3+"
-SLOT="0"
-
-RDEPEND="
- dev-python/numpy[${PYTHON_USEDEP}]
- dev-python/matplotlib[${PYTHON_USEDEP}]
- sci-biology/pysam[${PYTHON_USEDEP}]"
-DEPEND="${RDEPEND}"
-BDEPEND="
- >=dev-lang/swig-3.0.8
- dev-python/cython[${PYTHON_USEDEP}]"
diff --git a/sci-biology/HTSeq/Manifest b/sci-biology/HTSeq/Manifest
index fbb304f1410e..89b37aa1c25b 100644
--- a/sci-biology/HTSeq/Manifest
+++ b/sci-biology/HTSeq/Manifest
@@ -1,2 +1 @@
-DIST HTSeq-0.12.4.tar.gz 36187218 BLAKE2B 27be4e8783f9e32c10e23ae812069b489eb11dfa4058db43b5db4b8089792351901255103e4d4de1bcf866da3acd13e742adf8d35a9b70305aa156c70dde0837 SHA512 ec4a1a7e9177f103465840ffa9f936a5e887ffd17760b99d4cbdfd5a88e2ab44275fadfcbee153aadc6e828de7be205ed7a07f3a0548457b7c66826341c3ca64
DIST HTSeq-2.0.2.gh.tar.gz 48468261 BLAKE2B c68ec67906f3cf78954e94214b82fd51bc19e0c505f994a3df4bfc682d804fa26f4883e9a8fa1e8ddf1e4f8ba8690d605705ebdd2d1695470984c2f04b6a19ce SHA512 96c0b4de6c9cfa9e405f02e366ecfed63bb0dba0ab76fe872f6f48b52a4956b08fa75efa4b1e4c6e4560e34b4e2921bf1ec9671831226ad415ed421a88ec3f6d