summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorDavid Seifert <soap@gentoo.org>2017-09-02 13:07:41 +0200
committerDavid Seifert <soap@gentoo.org>2017-09-02 14:36:56 +0200
commit59716472229d52eacd4bba26ac2d90a9b3f44233 (patch)
tree6102a1600a05d57b242a8fcd5bee38383bd479f7 /sci-biology/bwa/bwa-0.7.12.ebuild
parentsci-biology/bcftools: Add 1.5 from sci overlay (diff)
downloadgentoo-59716472229d52eacd4bba26ac2d90a9b3f44233.tar.gz
gentoo-59716472229d52eacd4bba26ac2d90a9b3f44233.tar.bz2
gentoo-59716472229d52eacd4bba26ac2d90a9b3f44233.zip
sci-biology/bwa: Remove old
Package-Manager: Portage-2.3.8, Repoman-2.3.3 Closes: https://github.com/gentoo/gentoo/pull/5593
Diffstat (limited to 'sci-biology/bwa/bwa-0.7.12.ebuild')
-rw-r--r--sci-biology/bwa/bwa-0.7.12.ebuild33
1 files changed, 0 insertions, 33 deletions
diff --git a/sci-biology/bwa/bwa-0.7.12.ebuild b/sci-biology/bwa/bwa-0.7.12.ebuild
deleted file mode 100644
index 86f3d3e86c4..00000000000
--- a/sci-biology/bwa/bwa-0.7.12.ebuild
+++ /dev/null
@@ -1,33 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit eutils toolchain-funcs
-
-DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
-HOMEPAGE="http://bio-bwa.sourceforge.net/"
-SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86 ~x64-macos"
-
-PATCHES=( "${FILESDIR}"/${P}-Makefile.patch )
-
-src_prepare() {
- epatch "${PATCHES[@]}"
- tc-export CC AR
-}
-
-src_install() {
- dobin bwa
-
- doman bwa.1
-
- exeinto /usr/libexec/${PN}
- doexe qualfa2fq.pl xa2multi.pl
-
- dodoc NEWS.md README-alt.md README.md
-}