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| author |   David Seifert <soap@gentoo.org> | 2022-07-07 21:57:04 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2022-07-07 21:57:04 +0200 |
| commit | f040325d9ef33ba1c90bfa955b22ca51c8c9f7ff (patch) | |
| tree | a6362cb85f12d71f939ee6dc7d1f44dbc3821504 /sci-biology/phred | |
| parent | sci-biology/pals: update EAPI 6 -> 8 (diff) | |
| download | gentoo-f040325d9ef33ba1c90bfa955b22ca51c8c9f7ff.tar.gz gentoo-f040325d9ef33ba1c90bfa955b22ca51c8c9f7ff.tar.bz2 gentoo-f040325d9ef33ba1c90bfa955b22ca51c8c9f7ff.zip | |
sci-biology/phred: update EAPI 6 -> 8
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology/phred')
| -rw-r--r-- | sci-biology/phred/phred-071220-r2.ebuild (renamed from sci-biology/phred/phred-071220-r1.ebuild) | 24 |
1 files changed, 10 insertions, 14 deletions
diff --git a/sci-biology/phred/phred-071220-r1.ebuild b/sci-biology/phred/phred-071220-r2.ebuild index bf7a0c7338cb..9d7ff9a1f6c8 100644 --- a/sci-biology/phred/phred-071220-r1.ebuild +++ b/sci-biology/phred/phred-071220-r2.ebuild @@ -1,28 +1,23 @@ -# Copyright 1999-2019 Gentoo Authors +# Copyright 1999-2022 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=6 +EAPI=8 inherit toolchain-funcs DESCRIPTION="A base caller for Sanger DNA sequencing" HOMEPAGE="http://phrap.org/phredphrapconsed.html" SRC_URI="phred-dist-071220.b-acd.tar.gz" +S="${WORKDIR}" LICENSE="phrap" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="" - -S="${WORKDIR}" - RESTRICT="fetch" + PATCHES=( - "${FILESDIR}/${PN}-071220-fix-build-system.patch" - "${FILESDIR}/${PN}-071220-fix-qa.patch" + "${FILESDIR}"/${PN}-071220-fix-build-system.patch + "${FILESDIR}"/${PN}-071220-fix-qa.patch ) pkg_nofetch() { @@ -39,11 +34,12 @@ src_compile() { src_install() { dobin phred daev - insinto /usr/share/${PN} + insinto /usr/share/phred doins phredpar.dat - echo "PHRED_PARAMETER_FILE=${EPREFIX}/usr/share/${PN}/phredpar.dat" > 99phred || die - doenvd 99phred + newenvd - 99phred <<- EOF + PHRED_PARAMETER_FILE="${EPREFIX}/usr/share/phred/phredpar.dat" + EOF newdoc DAEV.DOC DAEV.DOC.txt newdoc PHRED.DOC PHRED.DOC.txt |