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| author |   Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 13:49:04 -0700 |
|---|---|---|
| committer | Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 17:38:18 -0700 |
| commit | 56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch) | |
| tree | 3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-biology/poa/files | |
| download | gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.gz gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.bz2 gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.zip | |
proj/gentoo: Initial commit
This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.
This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.
Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-biology/poa/files')
| -rw-r--r-- | sci-biology/poa/files/2-respect-flags.patch | 26 | ||||
| -rw-r--r-- | sci-biology/poa/files/respect-cflags.patch | 13 |
2 files changed, 39 insertions, 0 deletions
diff --git a/sci-biology/poa/files/2-respect-flags.patch b/sci-biology/poa/files/2-respect-flags.patch new file mode 100644 index 000000000000..bdd638cf64b7 --- /dev/null +++ b/sci-biology/poa/files/2-respect-flags.patch @@ -0,0 +1,26 @@ +diff --git a/Makefile b/Makefile +index a65bed0..713a7ab 100644 +--- a/Makefile ++++ b/Makefile +@@ -26,9 +26,10 @@ LIBOBJECTS= \ + stringptr.o + + +-CC = gcc ++CC ?= gcc + #CFLAGS= -g -ansi-strict -W -Wall -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. +-CFLAGS= -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. ++OPT_CFLAGS = -g ++CFLAGS= $(OPT_CFLAGS) -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. + # -I$(HOME)/lib/include + # -DREPORT_MAX_ALLOC + +@@ -44,7 +45,7 @@ liblpo.a: $(LIBOBJECTS) + + # NB: LIBRARY MUST FOLLOW OBJECTS OR LINK FAILS WITH UNRESOLVED REFERENCES!! + poa: $(OBJECTS) liblpo.a +- $(CC) -o $@ $(OBJECTS) -lm liblpo.a ++ $(CC) $(LDFLAGS) -o $@ $(OBJECTS) -lm liblpo.a + + what: + @echo poa: partial-order based sequence alignment program diff --git a/sci-biology/poa/files/respect-cflags.patch b/sci-biology/poa/files/respect-cflags.patch new file mode 100644 index 000000000000..2ae08db4ff4d --- /dev/null +++ b/sci-biology/poa/files/respect-cflags.patch @@ -0,0 +1,13 @@ +diff -urN poaV2.orig/Makefile poaV2/Makefile +--- poaV2.orig/Makefile 2004-03-11 21:33:30.000000000 -0800 ++++ poaV2/Makefile 2006-03-09 20:09:27.000000000 -0800 +@@ -28,7 +28,8 @@ + + CC = gcc + #CFLAGS= -g -ansi-strict -W -Wall -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. +-CFLAGS= -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. ++OPT_CFLAGS = -g ++CFLAGS= $(OPT_CFLAGS) -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. + # -I$(HOME)/lib/include + # -DREPORT_MAX_ALLOC + |