proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

1 files changed, 96 insertions, 0 deletions

diff --git a/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild
new file mode 100644
index 000000000000..fc2e6d6fe639
--- /dev/null
+++ b/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild
@@ -0,0 +1,96 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit bash-completion-r1 cmake-utils multilib
+
+IUSE="doc examples extras +gromacs"
+PDEPEND="extras? ( =sci-chemistry/votca-csgapps-${PV} )"
+if [ "${PV}" != "9999" ]; then
+	SRC_URI="http://downloads.votca.googlecode.com/hg/${P}.tar.gz
+		doc? ( http://downloads.votca.googlecode.com/hg/${PN}-manual-${PV}.pdf )
+		examples? (	http://downloads.votca.googlecode.com/hg/${PN}-tutorials-${PV}.tar.gz )"
+else
+	SRC_URI=""
+	inherit mercurial
+	EHG_REPO_URI="https://csg.votca.googlecode.com/hg"
+	PDEPEND="${PDEPEND} doc? ( =app-doc/${PN}-manual-${PV} )
+		examples? ( =sci-chemistry/${PN}-tutorials-${PV} )"
+fi
+
+DESCRIPTION="Votca coarse-graining engine"
+HOMEPAGE="http://www.votca.org"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="amd64 x86 ~amd64-linux ~x86-macos"
+
+#perl is only used for scripts
+RDEPEND="~sci-libs/votca-tools-${PV}
+	gromacs? ( sci-chemistry/gromacs:= )
+	dev-lang/perl
+	app-shells/bash"
+
+DEPEND="${RDEPEND}
+	doc? ( || ( <app-doc/doxygen-1.7.6.1[-nodot] >=app-doc/doxygen-1.7.6.1[dot] ) )
+	>=app-text/txt2tags-2.5
+	virtual/pkgconfig"
+
+DOCS=(README NOTICE ChangeLog)
+
+src_configure() {
+	local GMX_DEV="OFF" GMX_DOUBLE="OFF" extra
+
+	if use gromacs; then
+		has_version ">=sci-chemistry/gromacs-5" && GMX_DEV="ON"
+		has_version sci-chemistry/gromacs[double-precision] && GMX_DOUBLE="ON"
+	fi
+
+	#to create man pages, build tree binaries are executed (bug #398437)
+	[[ ${CHOST} = *-darwin* ]] && \
+		extra+=" -DCMAKE_BUILD_WITH_INSTALL_RPATH=OFF"
+
+	mycmakeargs=(
+		$(cmake-utils_use_with gromacs GMX)
+		-DWITH_GMX_DEVEL="${GMX_DEV}"
+		-DGMX_DOUBLE="${GMX_DOUBLE}"
+		${extra}
+		-DWITH_RC_FILES=OFF
+		-DEXTERNAL_BOOST=ON
+		-DLIB=$(get_libdir)
+	)
+	cmake-utils_src_configure
+}
+
+src_install() {
+	cmake-utils_src_install
+	newbashcomp scripts/csg-completion.bash csg_call
+	for i in "${ED}"/usr/bin/csg_*; do
+		[[ ${i} = *csg_call ]] && continue
+		bashcomp_alias csg_call "${i##*/}"
+	done
+	if use doc; then
+		if [ -n "${PV##*9999}" ]; then
+			dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf"
+		fi
+		cd "${CMAKE_BUILD_DIR}" || die
+		cd share/doc || die
+		doxygen || die
+		dohtml -r html/*
+	fi
+	if use examples && [ -n "${PV##*9999}" ]; then
+		insinto "/usr/share/doc/${PF}/tutorials"
+		docompress -x "/usr/share/doc/${PF}/tutorials"
+		doins -r "${WORKDIR}/${PN}-tutorials-${PV}"/*
+	fi
+}
+
+pkg_postinst() {
+	einfo
+	einfo "Please read and cite:"
+	einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). "
+	einfo "http://dx.doi.org/10.1021/ct900369w"
+	einfo
+}