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authorJakov Smolic <jakov.smolic@sartura.hr>2021-08-14 12:13:18 +0200
committerDavid Seifert <soap@gentoo.org>2021-08-14 12:13:18 +0200
commita4bb54a899bf76f3982e846772579e1820e8d305 (patch)
treeb42908a09a0a431ead8a0698146a283283ae5b9e /sci-chemistry
parentsci-libs/fetk: Port to EAPI 8 (diff)
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sci-chemistry/theseus: Port to EAPI 8
Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-chemistry')
-rw-r--r--sci-chemistry/theseus/theseus-3.3.0-r1.ebuild28
1 files changed, 15 insertions, 13 deletions
diff --git a/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild b/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
index f9e62b3916d7..fe012719670a 100644
--- a/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
+++ b/sci-chemistry/theseus/theseus-3.3.0-r1.ebuild
@@ -1,40 +1,42 @@
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=8
-inherit multilib toolchain-funcs
+inherit toolchain-funcs
DESCRIPTION="Maximum likelihood superpositioning and analysis of macromolecular structures"
HOMEPAGE="http://www.theseus3d.org/"
SRC_URI="http://www.theseus3d.org/src/${PN}_${PV}.tar.gz"
+S="${WORKDIR}"/${PN}_src
-SLOT="0"
LICENSE="GPL-3"
+SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="examples"
RDEPEND="
sci-libs/gsl:=
|| (
+ sci-biology/clustalw:2
+ sci-biology/kalign
+ sci-biology/mafft
sci-biology/muscle
sci-biology/probcons
- sci-biology/mafft
sci-biology/t-coffee
- sci-biology/kalign
- sci-biology/clustalw:2
- )"
-DEPEND="${RDEPEND}
- virtual/pkgconfig"
-
-S="${WORKDIR}"/${PN}_src/
+ )
+"
+DEPEND="${RDEPEND}"
+BDEPEND="virtual/pkgconfig"
src_prepare() {
- cat >> make.inc <<- EOF
+ default
+
+ cat >> make.inc <<- EOF || die
ARCH = $(tc-getAR)
ARCHFLAGS = -rvs
RANLIB = $(tc-getRANLIB)
- LOCALLIBDIR = "${EPREFIX}/usr/$(get_libdir)
+ LOCALLIBDIR = "${EPREFIX}"/usr/$(get_libdir)
SYSLIBS = $($(tc-getPKG_CONFIG) --libs gsl) -lpthread
LIBS = -ldistfit -lmsa -ldssplite -ldltmath -lDLTutils -ltheseus
LIBDIR = -L./lib